RNA–Protein interactions for RNA: ENST00000617560.1

PHF20-216, Transcript of PHD finger protein 20, humanhuman

TSL 2

Gene PHF20, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-216ENST00000617560 NEXMIFQ5QGS0 1516 aa20.48■□□□□ 0.87
PHF20-216ENST00000617560 BRWD3Q6RI45 1802 aa20.48■□□□□ 0.87
PHF20-216ENST00000617560 XPCQ01831 940 aaPredicted RBP20.47■□□□□ 0.87
PHF20-216ENST00000617560 GLI3P10071 1580 aa20.46■□□□□ 0.87
PHF20-216ENST00000617560 LRP5O75197 1615 aa20.46■□□□□ 0.87
PHF20-216ENST00000617560 RALGAPBQ86X10 1494 aa20.44■□□□□ 0.86
PHF20-216ENST00000617560 PXDNQ92626 1479 aa20.43■□□□□ 0.86
PHF20-216ENST00000617560 CLTCL1P53675 1640 aa20.43■□□□□ 0.86
PHF20-216ENST00000617560 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.43■□□□□ 0.86
PHF20-216ENST00000617560 ESCO1Q5FWF5 840 aa20.42■□□□□ 0.86
PHF20-216ENST00000617560 NPHP3Q7Z494 1330 aa20.42■□□□□ 0.86
PHF20-216ENST00000617560 ROCK1Q13464 1354 aa20.42■□□□□ 0.86
PHF20-216ENST00000617560 PSDA5PKW4 1024 aaPredicted RBP20.41■□□□□ 0.86
PHF20-216ENST00000617560 FOXO3O43524 673 aa20.41■□□□□ 0.86
PHF20-216ENST00000617560 SF3B2Q13435 895 aaKnown RBP20.4■□□□□ 0.86
PHF20-216ENST00000617560 UNC5CLQ8IV45 518 aa20.4■□□□□ 0.86
PHF20-216ENST00000617560 SLIT2O94813 1529 aa20.38■□□□□ 0.85
PHF20-216ENST00000617560 ITGAEP38570 1179 aa20.37■□□□□ 0.85
PHF20-216ENST00000617560 SEPT12Q8IYM1 358 aa20.37■□□□□ 0.85
PHF20-216ENST00000617560 KIF1BO60333 1816 aa20.37■□□□□ 0.85
PHF20-216ENST00000617560 NUTM2FA1L443 756 aa20.36■□□□□ 0.85
PHF20-216ENST00000617560 HRCP23327 699 aa20.35■□□□□ 0.85
PHF20-216ENST00000617560 HFM1A2PYH4 1435 aa20.35■□□□□ 0.85
PHF20-216ENST00000617560 CDC42BPGQ6DT37 1551 aa20.34■□□□□ 0.85
PHF20-216ENST00000617560 PRAG1Q86YV5 1406 aa20.34■□□□□ 0.85
PHF20-216ENST00000617560 USP32Q8NFA0 1604 aa20.31■□□□□ 0.84
PHF20-216ENST00000617560 VGFO15240 615 aaPredicted RBP20.31■□□□□ 0.84
PHF20-216ENST00000617560 PLEKHG5O94827 1062 aa20.3■□□□□ 0.84
PHF20-216ENST00000617560 NAIPQ13075 1403 aa20.29■□□□□ 0.84
PHF20-216ENST00000617560 KRT27Q7Z3Y8 459 aa20.29■□□□□ 0.84
PHF20-216ENST00000617560 CCDC9Q9Y3X0 531 aaKnown RBP20.29■□□□□ 0.84
PHF20-216ENST00000617560 SPATA31A3Q5VYP0 1347 aa20.28■□□□□ 0.84
PHF20-216ENST00000617560 LRPPRCP42704 1394 aaKnown RBP20.28■□□□□ 0.84
PHF20-216ENST00000617560 PLCH1Q4KWH8 1693 aa20.27■□□□□ 0.84
PHF20-216ENST00000617560 VPS72Q15906 364 aa20.27■□□□□ 0.84
PHF20-216ENST00000617560 CABLES1Q8TDN4 633 aa20.27■□□□□ 0.84
PHF20-216ENST00000617560 BAG6P46379 1132 aa20.26■□□□□ 0.83
PHF20-216ENST00000617560 WAPLQ7Z5K2 1190 aa20.26■□□□□ 0.83
PHF20-216ENST00000617560 ONECUT3O60422 494 aaPredicted RBP20.25■□□□□ 0.83
PHF20-216ENST00000617560 HAP1P54257 671 aaPredicted RBP20.25■□□□□ 0.83
PHF20-216ENST00000617560 PPLO60437 1756 aa20.25■□□□□ 0.83
PHF20-216ENST00000617560 A0A0G2JS52 829 aa20.24■□□□□ 0.83
PHF20-216ENST00000617560 MYT1Q01538 1121 aa20.24■□□□□ 0.83
PHF20-216ENST00000617560 STK26Q9P289 416 aa20.24■□□□□ 0.83
PHF20-216ENST00000617560 EN1Q05925 392 aaPredicted RBP20.23■□□□□ 0.83
PHF20-216ENST00000617560 R3HDM1Q15032 1099 aaKnown RBP20.23■□□□□ 0.83
PHF20-216ENST00000617560 KRT28Q7Z3Y7 464 aa20.23■□□□□ 0.83
PHF20-216ENST00000617560 NWD2Q9ULI1 1742 aa20.22■□□□□ 0.83
PHF20-216ENST00000617560 CCDC144AA2RUR9 1427 aa20.21■□□□□ 0.83
PHF20-216ENST00000617560 FAM182BQ5T319 152 aa20.21■□□□□ 0.83
PHF20-216ENST00000617560 FMN2Q9NZ56 1722 aa20.21■□□□□ 0.83
PHF20-216ENST00000617560 PLEKHH1Q9ULM0 1364 aa20.21■□□□□ 0.83
PHF20-216ENST00000617560 KIF1AQ12756 1690 aa20.19■□□□□ 0.82
PHF20-216ENST00000617560 ABCA3Q99758 1704 aa20.19■□□□□ 0.82
PHF20-216ENST00000617560 RGPD8O14715 1765 aaPredicted RBP20.19■□□□□ 0.82
PHF20-216ENST00000617560 RPGRIP1LQ68CZ1 1315 aa20.19■□□□□ 0.82
PHF20-216ENST00000617560 TNS3Q68CZ2 1445 aa20.19■□□□□ 0.82
PHF20-216ENST00000617560 FAM98CQ17RN3 349 aaKnown RBP20.18■□□□□ 0.82
PHF20-216ENST00000617560 FAM83GA6ND36 823 aa20.17■□□□□ 0.82
PHF20-216ENST00000617560 LMOD2Q6P5Q4 547 aa20.17■□□□□ 0.82
PHF20-216ENST00000617560 RGPD1P0DJD0 1748 aa20.16■□□□□ 0.82
PHF20-216ENST00000617560 ADGRF5Q8IZF2 1346 aa20.16■□□□□ 0.82
PHF20-216ENST00000617560 TECPR2O15040 1411 aa20.15■□□□□ 0.82
PHF20-216ENST00000617560 NRAPQ86VF7 1730 aa20.14■□□□□ 0.81
PHF20-216ENST00000617560 YY1P25490 414 aa20.14■□□□□ 0.81
PHF20-216ENST00000617560 TMEM132EQ6IEE7 984 aa20.14■□□□□ 0.81
PHF20-216ENST00000617560 PHF8Q9UPP1 1060 aa20.13■□□□□ 0.81
PHF20-216ENST00000617560 TNS1Q9HBL0 1735 aaKnown RBP20.13■□□□□ 0.81
PHF20-216ENST00000617560 EZH2Q15910 746 aaKnown RBP20.12■□□□□ 0.81
PHF20-216ENST00000617560 KNDC1Q76NI1 1749 aa20.11■□□□□ 0.81
PHF20-216ENST00000617560 IFT172Q9UG01 1749 aa20.11■□□□□ 0.81
PHF20-216ENST00000617560 PSME1Q06323 249 aa20.11■□□□□ 0.81
PHF20-216ENST00000617560 PPARGC1BQ86YN6 1023 aaKnown RBP20.11■□□□□ 0.81
PHF20-216ENST00000617560 ABCC11Q96J66 1382 aa20.1■□□□□ 0.81
PHF20-216ENST00000617560 BTG4Q9NY30 223 aa20.1■□□□□ 0.81
PHF20-216ENST00000617560 RRBP1Q9P2E9 1410 aaKnown RBP20.1■□□□□ 0.81
PHF20-216ENST00000617560 SBNO1A3KN83 1393 aa20.08■□□□□ 0.81
PHF20-216ENST00000617560 DISP2A7MBM2 1401 aa20.08■□□□□ 0.8
PHF20-216ENST00000617560 ARHGEF10O15013 1369 aa20.08■□□□□ 0.8
PHF20-216ENST00000617560 NRXN1Q9ULB1 1477 aa20.06■□□□□ 0.8
PHF20-216ENST00000617560 RGL3Q3MIN7 710 aa20.06■□□□□ 0.8
PHF20-216ENST00000617560 CAMKK2Q96RR4 588 aa20.05■□□□□ 0.8
PHF20-216ENST00000617560 THSD7AQ9UPZ6 1657 aa20.04■□□□□ 0.8
PHF20-216ENST00000617560 YTHDC2Q9H6S0 1430 aaKnown RBP20.04■□□□□ 0.8
PHF20-216ENST00000617560 PMFBP1Q8TBY8 1022 aa20.04■□□□□ 0.8
PHF20-216ENST00000617560 SLC4A1APQ9BWU0 796 aaKnown RBP20.04■□□□□ 0.8
PHF20-216ENST00000617560 SPATA31A5Q5VU36 1347 aa20.03■□□□□ 0.8
PHF20-216ENST00000617560 SPATA31A7Q8IWB4 1347 aa20.03■□□□□ 0.8
PHF20-216ENST00000617560 COL14A1Q05707 1796 aaKnown RBP20.03■□□□□ 0.8
PHF20-216ENST00000617560 TRIM37O94972 964 aa20.03■□□□□ 0.8
PHF20-216ENST00000617560 SAFB2Q14151 953 aaKnown RBP eCLIP20.02■□□□□ 0.8
PHF20-216ENST00000617560 ADGRB2O60241 1585 aa20■□□□□ 0.79
PHF20-216ENST00000617560 TRPM3Q9HCF6 1732 aaPredicted RBP20■□□□□ 0.79
PHF20-216ENST00000617560 APBA3O96018 575 aa19.99■□□□□ 0.79
PHF20-216ENST00000617560 PIK3C2GO75747 1445 aa19.99■□□□□ 0.79
PHF20-216ENST00000617560 ANKRD30BQ9BXX2 1392 aa19.98■□□□□ 0.79
PHF20-216ENST00000617560 SPATA31E1Q6ZUB1 1445 aa19.98■□□□□ 0.79
PHF20-216ENST00000617560 ALS2Q96Q42 1657 aa19.97■□□□□ 0.79
PHF20-216ENST00000617560 RREB1Q92766 1687 aa19.97■□□□□ 0.79
PHF20-216ENST00000617560 NUP188Q5SRE5 1749 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms