RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 GNAI3P08754 354 aa21.48■■□□□ 1.03
ATXN2-227ENST00000616825 ADAMTS8Q9UP79 889 aa21.48■■□□□ 1.03
ATXN2-227ENST00000616825 PANK1Q8TE04 598 aa21.48■■□□□ 1.03
ATXN2-227ENST00000616825 RBM33Q96EV2 1170 aaKnown RBP21.48■■□□□ 1.03
ATXN2-227ENST00000616825 CCDC70Q6NSX1 233 aa21.48■■□□□ 1.03
ATXN2-227ENST00000616825 PCMTD1Q96MG8 357 aaPredicted RBP21.48■■□□□ 1.03
ATXN2-227ENST00000616825 C22orf23Q9BZE7 217 aa21.48■■□□□ 1.03
ATXN2-227ENST00000616825 WWC1Q8IX03 1113 aa21.47■■□□□ 1.03
ATXN2-227ENST00000616825 WASHC4Q2M389 1173 aa21.47■■□□□ 1.03
ATXN2-227ENST00000616825 SMARCA4P51532 1647 aa21.47■■□□□ 1.03
ATXN2-227ENST00000616825 CCDC73Q6ZRK6 1079 aa21.46■■□□□ 1.03
ATXN2-227ENST00000616825 MEX3CQ5U5Q3 659 aaKnown RBP21.46■■□□□ 1.03
ATXN2-227ENST00000616825 GAS2L2Q8NHY3 880 aa21.45■■□□□ 1.02
ATXN2-227ENST00000616825 FBXW7Q969H0 707 aa21.45■■□□□ 1.02
ATXN2-227ENST00000616825 FANCIQ9NVI1 1328 aa21.44■■□□□ 1.02
ATXN2-227ENST00000616825 RAD54L2Q9Y4B4 1467 aa21.44■■□□□ 1.02
ATXN2-227ENST00000616825 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.44■■□□□ 1.02
ATXN2-227ENST00000616825 BRD4O60885 1362 aaPredicted RBP21.44■■□□□ 1.02
ATXN2-227ENST00000616825 ABTB2Q8N961 1025 aa21.43■■□□□ 1.02
ATXN2-227ENST00000616825 TXNDC2Q86VQ3 553 aa21.43■■□□□ 1.02
ATXN2-227ENST00000616825 GPRASP1Q5JY77 1395 aa21.43■■□□□ 1.02
ATXN2-227ENST00000616825 CDC45O75419 566 aa21.43■■□□□ 1.02
ATXN2-227ENST00000616825 GPS2Q13227 327 aa21.43■■□□□ 1.02
ATXN2-227ENST00000616825 SURF6O75683 361 aaKnown RBP21.43■■□□□ 1.02
ATXN2-227ENST00000616825 ANO8Q9HCE9 1232 aaPredicted RBP21.43■■□□□ 1.02
ATXN2-227ENST00000616825 CCDC30Q5VVM6 783 aa21.42■■□□□ 1.02
ATXN2-227ENST00000616825 SASS6Q6UVJ0 657 aa21.42■■□□□ 1.02
ATXN2-227ENST00000616825 CCDC43Q96MW1 224 aaKnown RBP21.41■■□□□ 1.02
ATXN2-227ENST00000616825 ZNF592Q92610 1267 aa21.41■■□□□ 1.02
ATXN2-227ENST00000616825 PRKAR2BP31323 418 aa21.41■■□□□ 1.02
ATXN2-227ENST00000616825 HOMER1Q86YM7 354 aa21.4■■□□□ 1.02
ATXN2-227ENST00000616825 PLEKHO1Q53GL0 409 aaPredicted RBP21.4■■□□□ 1.02
ATXN2-227ENST00000616825 CNTLNQ9NXG0 1405 aa21.4■■□□□ 1.02
ATXN2-227ENST00000616825 WASHC2AQ641Q2 1341 aa21.39■■□□□ 1.01
ATXN2-227ENST00000616825 HSP90AA2PQ14568 343 aaPredicted RBP21.38■■□□□ 1.01
ATXN2-227ENST00000616825 FSD1Q9BTV5 496 aa21.38■■□□□ 1.01
ATXN2-227ENST00000616825 CUX1P39880 1505 aa21.38■■□□□ 1.01
ATXN2-227ENST00000616825 PSMA5P28066 241 aa21.38■■□□□ 1.01
ATXN2-227ENST00000616825 CCDC27Q2M243 656 aa21.38■■□□□ 1.01
ATXN2-227ENST00000616825 PROSER2Q86WR7 435 aaPredicted RBP21.37■■□□□ 1.01
ATXN2-227ENST00000616825 CNTROBQ8N137 903 aa21.37■■□□□ 1.01
ATXN2-227ENST00000616825 AQRO60306 1485 aaKnown RBP eCLIP21.37■■□□□ 1.011e-6■■■■■ 28.2
ATXN2-227ENST00000616825 SDF4Q9BRK5 362 aa21.36■■□□□ 1.01
ATXN2-227ENST00000616825 PPP2R1AP30153 589 aa21.36■■□□□ 1.01
ATXN2-227ENST00000616825 ESCO1Q5FWF5 840 aa21.36■■□□□ 1.01
ATXN2-227ENST00000616825 TBC1D2BQ9UPU7 963 aa21.36■■□□□ 1.01
ATXN2-227ENST00000616825 XBP1P17861 261 aa21.36■■□□□ 1.01
ATXN2-227ENST00000616825 RRBP1Q9P2E9 1410 aaKnown RBP21.35■■□□□ 1.01
ATXN2-227ENST00000616825 EXOSC9Q06265 439 aaKnown RBP21.35■■□□□ 1.01
ATXN2-227ENST00000616825 PRAM1Q96QH2 718 aa21.35■■□□□ 1.01
ATXN2-227ENST00000616825 LRRC9Q6ZRR7 1453 aa21.35■■□□□ 1.01
ATXN2-227ENST00000616825 TWISTNBQ3B726 338 aaPredicted RBP21.34■■□□□ 1.01
ATXN2-227ENST00000616825 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.34■■□□□ 1.01
ATXN2-227ENST00000616825 SAMD1Q6SPF0 538 aaPredicted RBP21.34■■□□□ 1.01
ATXN2-227ENST00000616825 RSPH6AQ9H0K4 717 aa21.34■■□□□ 1.01
ATXN2-227ENST00000616825 CDCA7LQ96GN5 454 aa21.34■■□□□ 1.01
ATXN2-227ENST00000616825 FYCO1Q9BQS8 1478 aa21.34■■□□□ 1.01
ATXN2-227ENST00000616825 NINLQ9Y2I6 1382 aa21.34■■□□□ 1.01
ATXN2-227ENST00000616825 FOSBP53539 338 aa21.34■■□□□ 1.01
ATXN2-227ENST00000616825 SART3Q15020 963 aaKnown RBP21.34■■□□□ 1.01
ATXN2-227ENST00000616825 SLC12A5Q9H2X9 1139 aa21.33■■□□□ 1.01
ATXN2-227ENST00000616825 BRMS1Q9HCU9 246 aa21.33■■□□□ 1.01
ATXN2-227ENST00000616825 FYB1O15117 783 aa21.32■■□□□ 1
ATXN2-227ENST00000616825 NCOA2Q15596 1464 aa21.32■■□□□ 1
ATXN2-227ENST00000616825 NBPF1Q3BBV0 1214 aa21.32■■□□□ 1
ATXN2-227ENST00000616825 HFM1A2PYH4 1435 aa21.32■■□□□ 1
ATXN2-227ENST00000616825 PDE3AQ14432 1141 aa21.32■■□□□ 1
ATXN2-227ENST00000616825 THEMISQ8N1K5 641 aaPredicted RBP21.32■■□□□ 1
ATXN2-227ENST00000616825 CASKIN1Q8WXD9 1431 aa21.31■■□□□ 1
ATXN2-227ENST00000616825 PDCP20941 246 aa21.31■■□□□ 1
ATXN2-227ENST00000616825 ZNF692Q9BU19 519 aaPredicted RBP21.31■■□□□ 1
ATXN2-227ENST00000616825 SLC52A1Q9NWF4 448 aa21.31■■□□□ 1
ATXN2-227ENST00000616825 HDGFL1Q5TGJ6 251 aa21.31■■□□□ 1
ATXN2-227ENST00000616825 NEK4P51957 841 aa21.3■■□□□ 1
ATXN2-227ENST00000616825 TATP17735 454 aaPredicted RBP21.29■■□□□ 1
ATXN2-227ENST00000616825 FAM177BA6PVY3 158 aa21.29■■□□□ 1
ATXN2-227ENST00000616825 HIP1O00291 1037 aa21.29■■□□□ 1
ATXN2-227ENST00000616825 MCM2P49736 904 aa21.29■■□□□ 1
ATXN2-227ENST00000616825 SULT6B1Q6IMI4 303 aa21.29■■□□□ 1
ATXN2-227ENST00000616825 KLHL34Q8N239 644 aa21.29■■□□□ 1
ATXN2-227ENST00000616825 RBM42Q9BTD8 480 aaKnown RBP21.29■■□□□ 1
ATXN2-227ENST00000616825 CWC22Q9HCG8 908 aaKnown RBP21.29■■□□□ 1
ATXN2-227ENST00000616825 OFD1O75665 1012 aa21.28■■□□□ 1
ATXN2-227ENST00000616825 GNAI2P04899 355 aa21.28■■□□□ 1
ATXN2-227ENST00000616825 AEBP2Q6ZN18 517 aaPredicted RBP21.28■■□□□ 1
ATXN2-227ENST00000616825 ERC1Q8IUD2 1116 aa21.28■■□□□ 1
ATXN2-227ENST00000616825 NAT10Q9H0A0 1025 aaKnown RBP21.28■■□□□ 1
ATXN2-227ENST00000616825 GCC1Q96CN9 775 aa21.27■■□□□ 1
ATXN2-227ENST00000616825 R3HCC1Q9Y3T6 440 aaKnown RBP21.27■■□□□ 1
ATXN2-227ENST00000616825 SLC4A2P04920 1241 aa21.26■□□□□ 0.99
ATXN2-227ENST00000616825 KIF6Q6ZMV9 814 aa21.26■□□□□ 0.99
ATXN2-227ENST00000616825 DNAJC2Q99543 621 aaKnown RBP21.26■□□□□ 0.99
ATXN2-227ENST00000616825 CABP1Q9NZU7 370 aa21.26■□□□□ 0.99
ATXN2-227ENST00000616825 OLFM4Q6UX06 510 aa21.26■□□□□ 0.99
ATXN2-227ENST00000616825 IKQ13123 557 aaPredicted RBP21.25■□□□□ 0.99
ATXN2-227ENST00000616825 PDZRN3Q9UPQ7 1066 aa21.25■□□□□ 0.99
ATXN2-227ENST00000616825 MTMR7Q9Y216 660 aa21.25■□□□□ 0.99
ATXN2-227ENST00000616825 SYNJ2O15056 1496 aa21.25■□□□□ 0.99
ATXN2-227ENST00000616825 ATP2B1P20020 1258 aa21.25■□□□□ 0.99
ATXN2-227ENST00000616825 STRN4Q9NRL3 753 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms