RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 DEKP35659 375 aaKnown RBP20.73■□□□□ 0.91
SEMA3B-212ENST00000616701 ZMYM3Q14202 1370 aa20.73■□□□□ 0.91
SEMA3B-212ENST00000616701 SRPK2P78362 688 aaKnown RBP20.73■□□□□ 0.91
SEMA3B-212ENST00000616701 ZFYVE9O95405 1425 aa20.73■□□□□ 0.91
SEMA3B-212ENST00000616701 CCDC146Q8IYE0 955 aa20.72■□□□□ 0.91
SEMA3B-212ENST00000616701 TULP4Q9NRJ4 1543 aa20.71■□□□□ 0.91
SEMA3B-212ENST00000616701 A2ML1A8K2U0 1454 aa20.7■□□□□ 0.9
SEMA3B-212ENST00000616701 B4GALNT3Q6L9W6 998 aa20.7■□□□□ 0.9
SEMA3B-212ENST00000616701 BLMP54132 1417 aaPredicted RBP20.7■□□□□ 0.9
SEMA3B-212ENST00000616701 RBM19Q9Y4C8 960 aaKnown RBP20.7■□□□□ 0.9
SEMA3B-212ENST00000616701 NPC1L1Q9UHC9 1359 aa20.69■□□□□ 0.9
SEMA3B-212ENST00000616701 MORC1Q86VD1 984 aa20.69■□□□□ 0.9
SEMA3B-212ENST00000616701 YTHDC2Q9H6S0 1430 aaKnown RBP20.69■□□□□ 0.9
SEMA3B-212ENST00000616701 RIMS2Q9UQ26 1411 aa20.69■□□□□ 0.9
SEMA3B-212ENST00000616701 TRHP20396 242 aaPredicted RBP20.68■□□□□ 0.9
SEMA3B-212ENST00000616701 SPATA31D1Q6ZQQ2 1576 aa20.68■□□□□ 0.9
SEMA3B-212ENST00000616701 WAPLQ7Z5K2 1190 aa20.67■□□□□ 0.9
SEMA3B-212ENST00000616701 ALKQ9UM73 1620 aa20.67■□□□□ 0.9
SEMA3B-212ENST00000616701 CEBPAP49715 358 aaPredicted RBP20.67■□□□□ 0.9
SEMA3B-212ENST00000616701 PKNOX2Q96KN3 472 aa20.67■□□□□ 0.9
SEMA3B-212ENST00000616701 PPP4R2Q9NY27 417 aa20.67■□□□□ 0.9
SEMA3B-212ENST00000616701 MSH5O43196 834 aa20.66■□□□□ 0.9
SEMA3B-212ENST00000616701 RTN4Q9NQC3 1192 aaKnown RBP20.66■□□□□ 0.9
SEMA3B-212ENST00000616701 PTPRMP28827 1452 aa20.65■□□□□ 0.9
SEMA3B-212ENST00000616701 DAXXQ9UER7 740 aaPredicted RBP20.62■□□□□ 0.89
SEMA3B-212ENST00000616701 PLEKHH1Q9ULM0 1364 aa20.62■□□□□ 0.89
SEMA3B-212ENST00000616701 RCAN3Q9UKA8 241 aa20.61■□□□□ 0.89
SEMA3B-212ENST00000616701 CDK19Q9BWU1 502 aa20.61■□□□□ 0.89
SEMA3B-212ENST00000616701 CGNL1Q0VF96 1302 aa20.61■□□□□ 0.89
SEMA3B-212ENST00000616701 PDE3BQ13370 1112 aa20.6■□□□□ 0.89
SEMA3B-212ENST00000616701 TNRQ92752 1358 aa20.6■□□□□ 0.89
SEMA3B-212ENST00000616701 RNF123Q5XPI4 1314 aa20.6■□□□□ 0.89
SEMA3B-212ENST00000616701 ANKRD36BQ8N2N9 1353 aa20.59■□□□□ 0.89
SEMA3B-212ENST00000616701 APAF1O14727 1248 aa20.59■□□□□ 0.89
SEMA3B-212ENST00000616701 PODXL2Q9NZ53 605 aa20.59■□□□□ 0.89
SEMA3B-212ENST00000616701 A0A1W2PP64 1363 aa20.59■□□□□ 0.89
SEMA3B-212ENST00000616701 ERICH6BQ5W0A0 696 aa20.59■□□□□ 0.89
SEMA3B-212ENST00000616701 TXNDC2Q86VQ3 553 aa20.58■□□□□ 0.89
SEMA3B-212ENST00000616701 GGNBP2Q9H3C7 697 aa20.58■□□□□ 0.89
SEMA3B-212ENST00000616701 MTHFSP49914 203 aa20.57■□□□□ 0.88
SEMA3B-212ENST00000616701 METP08581 1390 aa20.57■□□□□ 0.88
SEMA3B-212ENST00000616701 CABP1Q9NZU7 370 aa20.56■□□□□ 0.88
SEMA3B-212ENST00000616701 RRP1P56182 461 aaKnown RBP20.56■□□□□ 0.88
SEMA3B-212ENST00000616701 INSRP06213 1382 aa20.56■□□□□ 0.88
SEMA3B-212ENST00000616701 PLIN1O60240 522 aa20.55■□□□□ 0.88
SEMA3B-212ENST00000616701 PUS7Q96PZ0 661 aaKnown RBP20.55■□□□□ 0.88
SEMA3B-212ENST00000616701 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.54■□□□□ 0.88
SEMA3B-212ENST00000616701 NEUROD2Q15784 382 aa20.52■□□□□ 0.88
SEMA3B-212ENST00000616701 ATAD2Q6PL18 1390 aa20.52■□□□□ 0.88
SEMA3B-212ENST00000616701 RRP7AQ9Y3A4 280 aaKnown RBP20.51■□□□□ 0.87
SEMA3B-212ENST00000616701 POLR3AO14802 1390 aaPredicted RBP20.51■□□□□ 0.87
SEMA3B-212ENST00000616701 TERF2IPQ9NYB0 399 aa20.51■□□□□ 0.87
SEMA3B-212ENST00000616701 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.5■□□□□ 0.87
SEMA3B-212ENST00000616701 EXOC6Q8TAG9 804 aa20.5■□□□□ 0.87
SEMA3B-212ENST00000616701 SPINK5Q9NQ38 1064 aaPredicted RBP20.5■□□□□ 0.87
SEMA3B-212ENST00000616701 NRXN3Q9Y4C0 1643 aa20.5■□□□□ 0.87
SEMA3B-212ENST00000616701 LTKP29376 864 aa20.5■□□□□ 0.87
SEMA3B-212ENST00000616701 GOLGA2Q08379 1002 aa20.5■□□□□ 0.87
SEMA3B-212ENST00000616701 NCKAP5LQ9HCH0 1330 aa20.5■□□□□ 0.87
SEMA3B-212ENST00000616701 DMRT2Q9Y5R5 561 aa20.49■□□□□ 0.87
SEMA3B-212ENST00000616701 SETD1AO15047 1707 aaKnown RBP20.49■□□□□ 0.87
SEMA3B-212ENST00000616701 TMEM2Q9UHN6 1383 aa20.49■□□□□ 0.87
SEMA3B-212ENST00000616701 FYB1O15117 783 aa20.48■□□□□ 0.87
SEMA3B-212ENST00000616701 DUSP27Q5VZP5 1158 aa20.48■□□□□ 0.87
SEMA3B-212ENST00000616701 ZNF521Q96K83 1311 aa20.48■□□□□ 0.87
SEMA3B-212ENST00000616701 CD163L1Q9NR16 1453 aa20.48■□□□□ 0.87
SEMA3B-212ENST00000616701 FBLN1P23142 703 aa20.48■□□□□ 0.87
SEMA3B-212ENST00000616701 HDGFL2Q7Z4V5 671 aaPredicted RBP20.48■□□□□ 0.87
SEMA3B-212ENST00000616701 HDGFP51858 240 aaKnown RBP20.47■□□□□ 0.87
SEMA3B-212ENST00000616701 ABCC11Q96J66 1382 aa20.47■□□□□ 0.87
SEMA3B-212ENST00000616701 SLC26A8Q96RN1 970 aa20.47■□□□□ 0.87
SEMA3B-212ENST00000616701 CFAP53Q96M91 514 aa20.46■□□□□ 0.87
SEMA3B-212ENST00000616701 USP32Q8NFA0 1604 aa20.45■□□□□ 0.87
SEMA3B-212ENST00000616701 UBR1Q8IWV7 1749 aa20.45■□□□□ 0.86
SEMA3B-212ENST00000616701 NUTM2FA1L443 756 aa20.45■□□□□ 0.86
SEMA3B-212ENST00000616701 NINLQ9Y2I6 1382 aa20.44■□□□□ 0.86
SEMA3B-212ENST00000616701 IL27Q8NEV9 243 aa20.44■□□□□ 0.86
SEMA3B-212ENST00000616701 WASLO00401 505 aaPredicted RBP20.43■□□□□ 0.86
SEMA3B-212ENST00000616701 U2AF1L5P0DN76 240 aaPredicted RBP20.43■□□□□ 0.86
SEMA3B-212ENST00000616701 U2AF1Q01081 240 aaKnown RBP eCLIP20.43■□□□□ 0.86
SEMA3B-212ENST00000616701 SLFN5Q08AF3 891 aa20.43■□□□□ 0.86
SEMA3B-212ENST00000616701 SHPRHQ149N8 1683 aa20.43■□□□□ 0.86
SEMA3B-212ENST00000616701 NSD2O96028 1365 aa20.43■□□□□ 0.86
SEMA3B-212ENST00000616701 DLC1Q96QB1 1528 aa20.42■□□□□ 0.86
SEMA3B-212ENST00000616701 U2SURPO15042 1029 aaKnown RBP20.42■□□□□ 0.86
SEMA3B-212ENST00000616701 C20orf194Q5TEA3 1177 aa20.41■□□□□ 0.86
SEMA3B-212ENST00000616701 PPM1GO15355 546 aaPredicted RBP20.41■□□□□ 0.86
SEMA3B-212ENST00000616701 TCP11L2Q8N4U5 519 aa20.41■□□□□ 0.86
SEMA3B-212ENST00000616701 RUNDC1Q96C34 613 aa20.4■□□□□ 0.86
SEMA3B-212ENST00000616701 NUDT16Q96DE0 195 aaKnown RBP20.39■□□□□ 0.85
SEMA3B-212ENST00000616701 ZRANB1Q9UGI0 708 aa20.39■□□□□ 0.85
SEMA3B-212ENST00000616701 ROBO2Q9HCK4 1378 aa20.39■□□□□ 0.85
SEMA3B-212ENST00000616701 ADAMTS13Q76LX8 1427 aa20.38■□□□□ 0.85
SEMA3B-212ENST00000616701 WWC1Q8IX03 1113 aa20.38■□□□□ 0.85
SEMA3B-212ENST00000616701 CRBNQ96SW2 442 aa20.38■□□□□ 0.85
SEMA3B-212ENST00000616701 PPIP5K1Q6PFW1 1433 aa20.38■□□□□ 0.85
SEMA3B-212ENST00000616701 C3P01024 1663 aa20.38■□□□□ 0.85
SEMA3B-212ENST00000616701 EID1Q9Y6B2 187 aa20.37■□□□□ 0.85
SEMA3B-212ENST00000616701 NLRP1Q9C000 1473 aa20.37■□□□□ 0.85
SEMA3B-212ENST00000616701 NME9Q86XW9 330 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms