RNA–Protein interactions for RNA: ENST00000616553.1

AC009090.3-201, humanhuman

BASIC

Gene AC009090.3, Length 565 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009090.3-201ENST00000616553 MMP16P51512 607 aa11.4□□□□□ -0.58
AC009090.3-201ENST00000616553 AAASQ9NRG9 546 aa11.4□□□□□ -0.58
AC009090.3-201ENST00000616553 MDM2Q00987 491 aaPredicted RBP11.39□□□□□ -0.59
AC009090.3-201ENST00000616553 CRIPAKQ8N1N5 446 aa11.39□□□□□ -0.59
AC009090.3-201ENST00000616553 USP46P62068 366 aa11.38□□□□□ -0.59
AC009090.3-201ENST00000616553 ST8SIA5O15466 376 aa11.37□□□□□ -0.59
AC009090.3-201ENST00000616553 AVPP01185 164 aa11.37□□□□□ -0.59
AC009090.3-201ENST00000616553 CCDC102AQ96A19 550 aa11.36□□□□□ -0.59
AC009090.3-201ENST00000616553 ZBTB24O43167 697 aaPredicted RBP11.35□□□□□ -0.59
AC009090.3-201ENST00000616553 DXOO77932 396 aaKnown RBP11.35□□□□□ -0.59
AC009090.3-201ENST00000616553 USB1Q9BQ65 265 aaKnown RBP11.35□□□□□ -0.59
AC009090.3-201ENST00000616553 CYP4X1Q8N118 509 aa11.34□□□□□ -0.59
AC009090.3-201ENST00000616553 HOXA2O43364 376 aa11.33□□□□□ -0.6
AC009090.3-201ENST00000616553 TRIM32Q13049 653 aa11.33□□□□□ -0.6
AC009090.3-201ENST00000616553 HLA-CQ95604 372 aa11.33□□□□□ -0.6
AC009090.3-201ENST00000616553 WNT7AO00755 349 aa11.32□□□□□ -0.6
AC009090.3-201ENST00000616553 GPCPD1Q9NPB8 672 aa11.32□□□□□ -0.6
AC009090.3-201ENST00000616553 FAM217BQ9NTX9 383 aaPredicted RBP11.32□□□□□ -0.6
AC009090.3-201ENST00000616553 CLCN1P35523 988 aa11.31□□□□□ -0.6
AC009090.3-201ENST00000616553 CTC1Q2NKJ3 1217 aa11.3□□□□□ -0.6
AC009090.3-201ENST00000616553 SMCPP49901 116 aaPredicted RBP11.29□□□□□ -0.6
AC009090.3-201ENST00000616553 DACH1Q9UI36 760 aa11.27□□□□□ -0.61
AC009090.3-201ENST00000616553 TTC24A2A3L6 582 aaPredicted RBP11.26□□□□□ -0.61
AC009090.3-201ENST00000616553 AXIN1O15169 862 aa11.26□□□□□ -0.61
AC009090.3-201ENST00000616553 GUCA2AQ02747 115 aa11.26□□□□□ -0.61
AC009090.3-201ENST00000616553 SNIP1Q8TAD8 396 aaKnown RBP11.26□□□□□ -0.61
AC009090.3-201ENST00000616553 SMPD1P17405 629 aa11.25□□□□□ -0.61
AC009090.3-201ENST00000616553 KRI1Q8N9T8 703 aaKnown RBP11.25□□□□□ -0.61
AC009090.3-201ENST00000616553 MRGPRX2Q96LB1 330 aa11.25□□□□□ -0.61
AC009090.3-201ENST00000616553 REPIN1Q9BWE0 567 aaKnown RBP11.24□□□□□ -0.61
AC009090.3-201ENST00000616553 JUNDP17535 347 aa11.23□□□□□ -0.61
AC009090.3-201ENST00000616553 BARGINQ6ZT62 677 aa11.23□□□□□ -0.61
AC009090.3-201ENST00000616553 ZC3H15Q8WU90 426 aaKnown RBP11.23□□□□□ -0.61
AC009090.3-201ENST00000616553 ZMYND10O75800 440 aa11.22□□□□□ -0.61
AC009090.3-201ENST00000616553 LCE2AQ5TA79 106 aaPredicted RBP11.22□□□□□ -0.61
AC009090.3-201ENST00000616553 WNT7BP56706 349 aa11.21□□□□□ -0.61
AC009090.3-201ENST00000616553 RETREG3Q86VR2 466 aa11.21□□□□□ -0.61
AC009090.3-201ENST00000616553 NUTM1Q86Y26 1132 aa11.21□□□□□ -0.61
AC009090.3-201ENST00000616553 CCDC24Q8N4L8 307 aa11.21□□□□□ -0.61
AC009090.3-201ENST00000616553 SYMPKQ92797 1274 aaKnown RBP11.21□□□□□ -0.61
AC009090.3-201ENST00000616553 J3QL48 77 aa11.2□□□□□ -0.62
AC009090.3-201ENST00000616553 SKOR1P84550 965 aa11.2□□□□□ -0.62
AC009090.3-201ENST00000616553 GMPR2Q9P2T1 348 aaKnown RBP11.2□□□□□ -0.62
AC009090.3-201ENST00000616553 TREML4Q6UXN2 200 aa11.19□□□□□ -0.62
AC009090.3-201ENST00000616553 PCDHGC3Q9UN70 934 aa11.19□□□□□ -0.62
AC009090.3-201ENST00000616553 RC3H1Q5TC82 1133 aaKnown RBP11.18□□□□□ -0.62
AC009090.3-201ENST00000616553 FDX1P10109 184 aa11.17□□□□□ -0.62
AC009090.3-201ENST00000616553 SSTR3P32745 418 aaPredicted RBP11.17□□□□□ -0.62
AC009090.3-201ENST00000616553 C11orf95C9JLR9 678 aaPredicted RBP11.16□□□□□ -0.62
AC009090.3-201ENST00000616553 AMHR2Q16671 573 aa11.15□□□□□ -0.62
AC009090.3-201ENST00000616553 SPIRE2Q8WWL2 714 aa11.15□□□□□ -0.62
AC009090.3-201ENST00000616553 NUDT12Q9BQG2 462 aa11.15□□□□□ -0.62
AC009090.3-201ENST00000616553 PTCRAQ6ISU1 281 aaPredicted RBP11.14□□□□□ -0.63
AC009090.3-201ENST00000616553 HPS1Q92902 700 aa11.14□□□□□ -0.63
AC009090.3-201ENST00000616553 ATP13A2Q9NQ11 1180 aa11.14□□□□□ -0.63
AC009090.3-201ENST00000616553 C6orf229H3BNL8 230 aa11.12□□□□□ -0.63
AC009090.3-201ENST00000616553 TTLL12Q14166 644 aaPredicted RBP11.12□□□□□ -0.63
AC009090.3-201ENST00000616553 MS4A1P11836 297 aa11.11□□□□□ -0.63
AC009090.3-201ENST00000616553 SIAH2O43255 324 aa11.1□□□□□ -0.63
AC009090.3-201ENST00000616553 CCNYL3P0C7X3 344 aa11.1□□□□□ -0.63
AC009090.3-201ENST00000616553 MOXD2PA6NHM9 499 aa11.09□□□□□ -0.63
AC009090.3-201ENST00000616553 NDUFV2P19404 249 aa11.09□□□□□ -0.63
AC009090.3-201ENST00000616553 PTPRNQ16849 979 aa11.09□□□□□ -0.63
AC009090.3-201ENST00000616553 GIGYF2Q6Y7W6 1299 aaKnown RBP11.09□□□□□ -0.63
AC009090.3-201ENST00000616553 TRIM47Q96LD4 638 aa11.09□□□□□ -0.63
AC009090.3-201ENST00000616553 NFX1Q12986 1120 aaKnown RBP11.08□□□□□ -0.64
AC009090.3-201ENST00000616553 SENP2Q9HC62 589 aa11.08□□□□□ -0.64
AC009090.3-201ENST00000616553 WFS1O76024 890 aa11.07□□□□□ -0.64
AC009090.3-201ENST00000616553 ALDH1A1P00352 501 aa11.07□□□□□ -0.64
AC009090.3-201ENST00000616553 SNRPBP14678 240 aaKnown RBP11.07□□□□□ -0.64
AC009090.3-201ENST00000616553 EVA1BQ9NVM1 165 aa11.07□□□□□ -0.64
AC009090.3-201ENST00000616553 TRIM66O15016 1216 aa11.06□□□□□ -0.64
AC009090.3-201ENST00000616553 GJA5P36382 358 aa11.06□□□□□ -0.64
AC009090.3-201ENST00000616553 SH3BP2P78314 561 aa11.06□□□□□ -0.64
AC009090.3-201ENST00000616553 DESI1Q6ICB0 168 aa11.06□□□□□ -0.64
AC009090.3-201ENST00000616553 EHBP1Q8NDI1 1231 aa11.06□□□□□ -0.64
AC009090.3-201ENST00000616553 SPDYE5A6NIY4 337 aa11.05□□□□□ -0.64
AC009090.3-201ENST00000616553 PRR7Q8TB68 274 aa11.05□□□□□ -0.64
AC009090.3-201ENST00000616553 MTMR2Q13614 643 aa11.04□□□□□ -0.64
AC009090.3-201ENST00000616553 BEGAINQ9BUH8 593 aa11.04□□□□□ -0.64
AC009090.3-201ENST00000616553 UNC93B1Q9H1C4 597 aa11.04□□□□□ -0.64
AC009090.3-201ENST00000616553 PARP9Q8IXQ6 854 aa11.03□□□□□ -0.64
AC009090.3-201ENST00000616553 KIFC2Q96AC6 838 aa11.03□□□□□ -0.64
AC009090.3-201ENST00000616553 KCNH2Q12809 1159 aa11.02□□□□□ -0.65
AC009090.3-201ENST00000616553 AK7Q96M32 723 aa11.02□□□□□ -0.65
AC009090.3-201ENST00000616553 DIXDC1Q155Q3 683 aa11.01□□□□□ -0.65
AC009090.3-201ENST00000616553 TBC1D2Q9BYX2 928 aa11.01□□□□□ -0.65
AC009090.3-201ENST00000616553 RSBN1LQ6PCB5 846 aaPredicted RBP11□□□□□ -0.65
AC009090.3-201ENST00000616553 WIPF1O43516 503 aa10.99□□□□□ -0.65
AC009090.3-201ENST00000616553 BAP1Q92560 729 aa10.99□□□□□ -0.65
AC009090.3-201ENST00000616553 TERTO14746 1132 aaKnown RBP10.98□□□□□ -0.65
AC009090.3-201ENST00000616553 LCE2CQ5TA81 110 aa10.98□□□□□ -0.65
AC009090.3-201ENST00000616553 ZNF511Q8NB15 262 aa10.98□□□□□ -0.65
AC009090.3-201ENST00000616553 WASF2Q9Y6W5 498 aa10.98□□□□□ -0.65
AC009090.3-201ENST00000616553 SPTLC1O15269 473 aa10.97□□□□□ -0.65
AC009090.3-201ENST00000616553 LINC01559Q495D7 138 aa10.97□□□□□ -0.65
AC009090.3-201ENST00000616553 LYPD8Q6UX82 237 aa10.97□□□□□ -0.65
AC009090.3-201ENST00000616553 MPNDQ8N594 471 aa10.97□□□□□ -0.65
AC009090.3-201ENST00000616553 SLC24A3Q9HC58 644 aa10.97□□□□□ -0.65
AC009090.3-201ENST00000616553 CAPN5O15484 640 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms