RNA–Protein interactions for RNA: ENST00000616553.1

AC009090.3-201, humanhuman

BASIC

Gene AC009090.3, Length 565 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009090.3-201ENST00000616553 MMP16P51512 607 aa11.4□□□□□ -0.58
AC009090.3-201ENST00000616553 AAASQ9NRG9 546 aa11.4□□□□□ -0.58
AC009090.3-201ENST00000616553 MDM2Q00987 491 aaPredicted RBP11.39□□□□□ -0.59
AC009090.3-201ENST00000616553 CRIPAKQ8N1N5 446 aa11.39□□□□□ -0.59
AC009090.3-201ENST00000616553 USP46P62068 366 aa11.38□□□□□ -0.59
AC009090.3-201ENST00000616553 ST8SIA5O15466 376 aa11.37□□□□□ -0.59
AC009090.3-201ENST00000616553 AVPP01185 164 aa11.37□□□□□ -0.59
AC009090.3-201ENST00000616553 CCDC102AQ96A19 550 aa11.36□□□□□ -0.59
AC009090.3-201ENST00000616553 ZBTB24O43167 697 aaPredicted RBP11.35□□□□□ -0.59
AC009090.3-201ENST00000616553 DXOO77932 396 aaKnown RBP11.35□□□□□ -0.59
AC009090.3-201ENST00000616553 USB1Q9BQ65 265 aaKnown RBP11.35□□□□□ -0.59
AC009090.3-201ENST00000616553 CYP4X1Q8N118 509 aa11.34□□□□□ -0.59
AC009090.3-201ENST00000616553 HOXA2O43364 376 aa11.33□□□□□ -0.6
AC009090.3-201ENST00000616553 TRIM32Q13049 653 aa11.33□□□□□ -0.6
AC009090.3-201ENST00000616553 HLA-CQ95604 372 aa11.33□□□□□ -0.6
AC009090.3-201ENST00000616553 WNT7AO00755 349 aa11.32□□□□□ -0.6
AC009090.3-201ENST00000616553 GPCPD1Q9NPB8 672 aa11.32□□□□□ -0.6
AC009090.3-201ENST00000616553 FAM217BQ9NTX9 383 aaPredicted RBP11.32□□□□□ -0.6
AC009090.3-201ENST00000616553 CLCN1P35523 988 aa11.31□□□□□ -0.6
AC009090.3-201ENST00000616553 CTC1Q2NKJ3 1217 aa11.3□□□□□ -0.6
AC009090.3-201ENST00000616553 SMCPP49901 116 aaPredicted RBP11.29□□□□□ -0.6
AC009090.3-201ENST00000616553 DACH1Q9UI36 760 aa11.27□□□□□ -0.61
AC009090.3-201ENST00000616553 TTC24A2A3L6 582 aaPredicted RBP11.26□□□□□ -0.61
AC009090.3-201ENST00000616553 AXIN1O15169 862 aa11.26□□□□□ -0.61
AC009090.3-201ENST00000616553 GUCA2AQ02747 115 aa11.26□□□□□ -0.61
AC009090.3-201ENST00000616553 SNIP1Q8TAD8 396 aaKnown RBP11.26□□□□□ -0.61
AC009090.3-201ENST00000616553 SMPD1P17405 629 aa11.25□□□□□ -0.61
AC009090.3-201ENST00000616553 KRI1Q8N9T8 703 aaKnown RBP11.25□□□□□ -0.61
AC009090.3-201ENST00000616553 MRGPRX2Q96LB1 330 aa11.25□□□□□ -0.61
AC009090.3-201ENST00000616553 REPIN1Q9BWE0 567 aaKnown RBP11.24□□□□□ -0.61
AC009090.3-201ENST00000616553 JUNDP17535 347 aa11.23□□□□□ -0.61
AC009090.3-201ENST00000616553 BARGINQ6ZT62 677 aa11.23□□□□□ -0.61
AC009090.3-201ENST00000616553 ZC3H15Q8WU90 426 aaKnown RBP11.23□□□□□ -0.61
AC009090.3-201ENST00000616553 ZMYND10O75800 440 aa11.22□□□□□ -0.61
AC009090.3-201ENST00000616553 LCE2AQ5TA79 106 aaPredicted RBP11.22□□□□□ -0.61
AC009090.3-201ENST00000616553 WNT7BP56706 349 aa11.21□□□□□ -0.61
AC009090.3-201ENST00000616553 RETREG3Q86VR2 466 aa11.21□□□□□ -0.61
AC009090.3-201ENST00000616553 NUTM1Q86Y26 1132 aa11.21□□□□□ -0.61
AC009090.3-201ENST00000616553 CCDC24Q8N4L8 307 aa11.21□□□□□ -0.61
AC009090.3-201ENST00000616553 SYMPKQ92797 1274 aaKnown RBP11.21□□□□□ -0.61
AC009090.3-201ENST00000616553 J3QL48 77 aa11.2□□□□□ -0.62
AC009090.3-201ENST00000616553 SKOR1P84550 965 aa11.2□□□□□ -0.62
AC009090.3-201ENST00000616553 GMPR2Q9P2T1 348 aaKnown RBP11.2□□□□□ -0.62
AC009090.3-201ENST00000616553 TREML4Q6UXN2 200 aa11.19□□□□□ -0.62
AC009090.3-201ENST00000616553 PCDHGC3Q9UN70 934 aa11.19□□□□□ -0.62
AC009090.3-201ENST00000616553 RC3H1Q5TC82 1133 aaKnown RBP11.18□□□□□ -0.62
AC009090.3-201ENST00000616553 FDX1P10109 184 aa11.17□□□□□ -0.62
AC009090.3-201ENST00000616553 SSTR3P32745 418 aaPredicted RBP11.17□□□□□ -0.62
AC009090.3-201ENST00000616553 C11orf95C9JLR9 678 aaPredicted RBP11.16□□□□□ -0.62
AC009090.3-201ENST00000616553 AMHR2Q16671 573 aa11.15□□□□□ -0.62
AC009090.3-201ENST00000616553 SPIRE2Q8WWL2 714 aa11.15□□□□□ -0.62
AC009090.3-201ENST00000616553 NUDT12Q9BQG2 462 aa11.15□□□□□ -0.62
AC009090.3-201ENST00000616553 PTCRAQ6ISU1 281 aaPredicted RBP11.14□□□□□ -0.63
AC009090.3-201ENST00000616553 HPS1Q92902 700 aa11.14□□□□□ -0.63
AC009090.3-201ENST00000616553 ATP13A2Q9NQ11 1180 aa11.14□□□□□ -0.63
AC009090.3-201ENST00000616553 C6orf229H3BNL8 230 aa11.12□□□□□ -0.63
AC009090.3-201ENST00000616553 TTLL12Q14166 644 aaPredicted RBP11.12□□□□□ -0.63
AC009090.3-201ENST00000616553 MS4A1P11836 297 aa11.11□□□□□ -0.63
AC009090.3-201ENST00000616553 SIAH2O43255 324 aa11.1□□□□□ -0.63
AC009090.3-201ENST00000616553 CCNYL3P0C7X3 344 aa11.1□□□□□ -0.63
AC009090.3-201ENST00000616553 MOXD2PA6NHM9 499 aa11.09□□□□□ -0.63
AC009090.3-201ENST00000616553 NDUFV2P19404 249 aa11.09□□□□□ -0.63
AC009090.3-201ENST00000616553 PTPRNQ16849 979 aa11.09□□□□□ -0.63
AC009090.3-201ENST00000616553 GIGYF2Q6Y7W6 1299 aaKnown RBP11.09□□□□□ -0.63
AC009090.3-201ENST00000616553 TRIM47Q96LD4 638 aa11.09□□□□□ -0.63
AC009090.3-201ENST00000616553 NFX1Q12986 1120 aaKnown RBP11.08□□□□□ -0.64
AC009090.3-201ENST00000616553 SENP2Q9HC62 589 aa11.08□□□□□ -0.64
AC009090.3-201ENST00000616553 WFS1O76024 890 aa11.07□□□□□ -0.64
AC009090.3-201ENST00000616553 ALDH1A1P00352 501 aa11.07□□□□□ -0.64
AC009090.3-201ENST00000616553 SNRPBP14678 240 aaKnown RBP11.07□□□□□ -0.64
AC009090.3-201ENST00000616553 EVA1BQ9NVM1 165 aa11.07□□□□□ -0.64
AC009090.3-201ENST00000616553 TRIM66O15016 1216 aa11.06□□□□□ -0.64
AC009090.3-201ENST00000616553 GJA5P36382 358 aa11.06□□□□□ -0.64
AC009090.3-201ENST00000616553 SH3BP2P78314 561 aa11.06□□□□□ -0.64
AC009090.3-201ENST00000616553 DESI1Q6ICB0 168 aa11.06□□□□□ -0.64
AC009090.3-201ENST00000616553 EHBP1Q8NDI1 1231 aa11.06□□□□□ -0.64
AC009090.3-201ENST00000616553 SPDYE5A6NIY4 337 aa11.05□□□□□ -0.64
AC009090.3-201ENST00000616553 PRR7Q8TB68 274 aa11.05□□□□□ -0.64
AC009090.3-201ENST00000616553 MTMR2Q13614 643 aa11.04□□□□□ -0.64
AC009090.3-201ENST00000616553 BEGAINQ9BUH8 593 aa11.04□□□□□ -0.64
AC009090.3-201ENST00000616553 UNC93B1Q9H1C4 597 aa11.04□□□□□ -0.64
AC009090.3-201ENST00000616553 PARP9Q8IXQ6 854 aa11.03□□□□□ -0.64
AC009090.3-201ENST00000616553 KIFC2Q96AC6 838 aa11.03□□□□□ -0.64
AC009090.3-201ENST00000616553 KCNH2Q12809 1159 aa11.02□□□□□ -0.65
AC009090.3-201ENST00000616553 AK7Q96M32 723 aa11.02□□□□□ -0.65
AC009090.3-201ENST00000616553 DIXDC1Q155Q3 683 aa11.01□□□□□ -0.65
AC009090.3-201ENST00000616553 TBC1D2Q9BYX2 928 aa11.01□□□□□ -0.65
AC009090.3-201ENST00000616553 RSBN1LQ6PCB5 846 aaPredicted RBP11□□□□□ -0.65
AC009090.3-201ENST00000616553 WIPF1O43516 503 aa10.99□□□□□ -0.65
AC009090.3-201ENST00000616553 BAP1Q92560 729 aa10.99□□□□□ -0.65
AC009090.3-201ENST00000616553 TERTO14746 1132 aaKnown RBP10.98□□□□□ -0.65
AC009090.3-201ENST00000616553 LCE2CQ5TA81 110 aa10.98□□□□□ -0.65
AC009090.3-201ENST00000616553 ZNF511Q8NB15 262 aa10.98□□□□□ -0.65
AC009090.3-201ENST00000616553 WASF2Q9Y6W5 498 aa10.98□□□□□ -0.65
AC009090.3-201ENST00000616553 SPTLC1O15269 473 aa10.97□□□□□ -0.65
AC009090.3-201ENST00000616553 LINC01559Q495D7 138 aa10.97□□□□□ -0.65
AC009090.3-201ENST00000616553 LYPD8Q6UX82 237 aa10.97□□□□□ -0.65
AC009090.3-201ENST00000616553 MPNDQ8N594 471 aa10.97□□□□□ -0.65
AC009090.3-201ENST00000616553 SLC24A3Q9HC58 644 aa10.97□□□□□ -0.65
AC009090.3-201ENST00000616553 CAPN5O15484 640 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms