RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 C20orf194Q5TEA3 1177 aa16.6■□□□□ 0.25
PPP4R3B-206ENST00000616407 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.59■□□□□ 0.25
PPP4R3B-206ENST00000616407 PDE3AQ14432 1141 aa16.59■□□□□ 0.25
PPP4R3B-206ENST00000616407 GNAI1P63096 354 aa16.58■□□□□ 0.25
PPP4R3B-206ENST00000616407 WDR63Q8IWG1 891 aa16.58■□□□□ 0.25
PPP4R3B-206ENST00000616407 GOLGA6L22H0YM25 854 aa16.58■□□□□ 0.24
PPP4R3B-206ENST00000616407 ANKRD45Q5TZF3 282 aa16.58■□□□□ 0.24
PPP4R3B-206ENST00000616407 NUTM2GQ5VZR2 741 aa16.57■□□□□ 0.24
PPP4R3B-206ENST00000616407 DUSP27Q5VZP5 1158 aa16.56■□□□□ 0.24
PPP4R3B-206ENST00000616407 KIF16BQ96L93 1317 aa16.56■□□□□ 0.24
PPP4R3B-206ENST00000616407 CSB-PGBD3P0DP91 1061 aa16.56■□□□□ 0.24
PPP4R3B-206ENST00000616407 ARHGEF5Q12774 1597 aa16.55■□□□□ 0.24
PPP4R3B-206ENST00000616407 ADGBQ8N7X0 1667 aa16.55■□□□□ 0.24
PPP4R3B-206ENST00000616407 NCLP19338 710 aaKnown RBP16.55■□□□□ 0.24
PPP4R3B-206ENST00000616407 NLRP6P59044 892 aa16.54■□□□□ 0.24
PPP4R3B-206ENST00000616407 CCDC61Q9Y6R9 512 aa16.54■□□□□ 0.24
PPP4R3B-206ENST00000616407 HMMRO75330 724 aa16.53■□□□□ 0.24
PPP4R3B-206ENST00000616407 SKAP1Q86WV1 359 aa16.53■□□□□ 0.24
PPP4R3B-206ENST00000616407 NUDT16Q96DE0 195 aaKnown RBP16.53■□□□□ 0.24
PPP4R3B-206ENST00000616407 TMPOP42166 694 aaKnown RBP16.52■□□□□ 0.24
PPP4R3B-206ENST00000616407 RRS1Q15050 365 aaKnown RBP16.52■□□□□ 0.24
PPP4R3B-206ENST00000616407 ZNF692Q9BU19 519 aaPredicted RBP16.52■□□□□ 0.24
PPP4R3B-206ENST00000616407 SAMD9LQ8IVG5 1584 aa16.52■□□□□ 0.24
PPP4R3B-206ENST00000616407 CARD14Q9BXL6 1004 aa16.52■□□□□ 0.24
PPP4R3B-206ENST00000616407 API5Q9BZZ5 524 aaKnown RBP16.52■□□□□ 0.24
PPP4R3B-206ENST00000616407 BACH2Q9BYV9 841 aa16.52■□□□□ 0.23
PPP4R3B-206ENST00000616407 PSME1Q06323 249 aa16.51■□□□□ 0.23
PPP4R3B-206ENST00000616407 AAMPQ13685 434 aa16.51■□□□□ 0.23
PPP4R3B-206ENST00000616407 NECTIN2Q92692 538 aa16.51■□□□□ 0.23
PPP4R3B-206ENST00000616407 COL17A1Q9UMD9 1497 aaPredicted RBP16.51■□□□□ 0.23
PPP4R3B-206ENST00000616407 SULT6B1Q6IMI4 303 aa16.5■□□□□ 0.23
PPP4R3B-206ENST00000616407 LNPKQ9C0E8 428 aa16.5■□□□□ 0.23
PPP4R3B-206ENST00000616407 GPRASP1Q5JY77 1395 aa16.5■□□□□ 0.23
PPP4R3B-206ENST00000616407 THEMISQ8N1K5 641 aaPredicted RBP16.5■□□□□ 0.23
PPP4R3B-206ENST00000616407 CFAP44Q96MT7 982 aa16.5■□□□□ 0.23
PPP4R3B-206ENST00000616407 NOB1Q9ULX3 412 aaKnown RBP16.49■□□□□ 0.23
PPP4R3B-206ENST00000616407 EIF2AK4Q9P2K8 1649 aaKnown RBP16.49■□□□□ 0.23
PPP4R3B-206ENST00000616407 ATP7AQ04656 1500 aa16.49■□□□□ 0.23
PPP4R3B-206ENST00000616407 MAST1Q9Y2H9 1570 aa16.49■□□□□ 0.23
PPP4R3B-206ENST00000616407 FCHSD2O94868 740 aa16.49■□□□□ 0.23
PPP4R3B-206ENST00000616407 ASXL1Q8IXJ9 1541 aa16.48■□□□□ 0.23
PPP4R3B-206ENST00000616407 CEBPAP49715 358 aaPredicted RBP16.48■□□□□ 0.23
PPP4R3B-206ENST00000616407 CHMP4AQ9BY43 222 aa16.48■□□□□ 0.23
PPP4R3B-206ENST00000616407 TSPYL4Q9UJ04 414 aa16.48■□□□□ 0.23
PPP4R3B-206ENST00000616407 TTC37Q6PGP7 1564 aa16.47■□□□□ 0.23
PPP4R3B-206ENST00000616407 NME9Q86XW9 330 aa16.47■□□□□ 0.23
PPP4R3B-206ENST00000616407 PDZRN3Q9UPQ7 1066 aa16.47■□□□□ 0.23
PPP4R3B-206ENST00000616407 ERCC6L2Q5T890 1561 aa16.47■□□□□ 0.23
PPP4R3B-206ENST00000616407 RARSP54136 660 aaKnown RBP16.46■□□□□ 0.23
PPP4R3B-206ENST00000616407 TWISTNBQ3B726 338 aaPredicted RBP16.46■□□□□ 0.23
PPP4R3B-206ENST00000616407 TEFQ10587 303 aa16.46■□□□□ 0.23
PPP4R3B-206ENST00000616407 TPRNQ4KMQ1 711 aa16.46■□□□□ 0.23
PPP4R3B-206ENST00000616407 ABTB2Q8N961 1025 aa16.46■□□□□ 0.23
PPP4R3B-206ENST00000616407 THUMPD2Q9BTF0 503 aaKnown RBP16.46■□□□□ 0.23
PPP4R3B-206ENST00000616407 KCNJ4P48050 445 aa16.46■□□□□ 0.23
PPP4R3B-206ENST00000616407 WASLO00401 505 aaPredicted RBP16.45■□□□□ 0.22
PPP4R3B-206ENST00000616407 EIF2S2P20042 333 aaKnown RBP16.45■□□□□ 0.22
PPP4R3B-206ENST00000616407 FBLN1P23142 703 aa16.45■□□□□ 0.22
PPP4R3B-206ENST00000616407 ATF7IPQ6VMQ6 1270 aa16.45■□□□□ 0.22
PPP4R3B-206ENST00000616407 PPP6R1Q9UPN7 881 aa16.45■□□□□ 0.22
PPP4R3B-206ENST00000616407 NKTRP30414 1462 aaKnown RBP16.45■□□□□ 0.22
PPP4R3B-206ENST00000616407 LRPPRCP42704 1394 aaKnown RBP16.45■□□□□ 0.22
PPP4R3B-206ENST00000616407 LRRIQ1Q96JM4 1722 aa16.45■□□□□ 0.22
PPP4R3B-206ENST00000616407 TRIM6-TRIM34B2RNG4 842 aa16.45■□□□□ 0.22
PPP4R3B-206ENST00000616407 EMILIN1Q9Y6C2 1016 aa16.45■□□□□ 0.22
PPP4R3B-206ENST00000616407 CT47B1P0C2W7 299 aaPredicted RBP16.44■□□□□ 0.22
PPP4R3B-206ENST00000616407 MCCP23508 829 aa16.44■□□□□ 0.22
PPP4R3B-206ENST00000616407 MVPQ14764 893 aaKnown RBP16.44■□□□□ 0.22
PPP4R3B-206ENST00000616407 CHD1O14646 1710 aa16.44■□□□□ 0.22
PPP4R3B-206ENST00000616407 RTN4Q9NQC3 1192 aaKnown RBP16.44■□□□□ 0.22
PPP4R3B-206ENST00000616407 UHRF1BP1LA0JNW5 1464 aa16.43■□□□□ 0.22
PPP4R3B-206ENST00000616407 MYO5CQ9NQX4 1742 aa16.43■□□□□ 0.22
PPP4R3B-206ENST00000616407 FYB1O15117 783 aa16.43■□□□□ 0.22
PPP4R3B-206ENST00000616407 FKBP5Q13451 457 aaPredicted RBP16.43■□□□□ 0.22
PPP4R3B-206ENST00000616407 FOXD4L1Q9NU39 408 aa16.43■□□□□ 0.22
PPP4R3B-206ENST00000616407 MSH5O43196 834 aa16.42■□□□□ 0.22
PPP4R3B-206ENST00000616407 NFE2L2Q16236 605 aa16.42■□□□□ 0.22
PPP4R3B-206ENST00000616407 C1orf141Q5JVX7 400 aa16.42■□□□□ 0.22
PPP4R3B-206ENST00000616407 C1orf115Q9H7X2 142 aa16.42■□□□□ 0.22
PPP4R3B-206ENST00000616407 PLEKHH1Q9ULM0 1364 aa16.41■□□□□ 0.22
PPP4R3B-206ENST00000616407 GZF1Q9H116 711 aaPredicted RBP16.41■□□□□ 0.22
PPP4R3B-206ENST00000616407 NINLQ9Y2I6 1382 aa16.41■□□□□ 0.22
PPP4R3B-206ENST00000616407 SSH1Q8WYL5 1049 aa16.41■□□□□ 0.22
PPP4R3B-206ENST00000616407 CDC42BPAQ5VT25 1732 aa16.41■□□□□ 0.22
PPP4R3B-206ENST00000616407 PREX2Q70Z35 1606 aa16.41■□□□□ 0.22
PPP4R3B-206ENST00000616407 ANKRD36BQ8N2N9 1353 aa16.41■□□□□ 0.22
PPP4R3B-206ENST00000616407 PLA2R1Q13018 1463 aa16.4■□□□□ 0.22
PPP4R3B-206ENST00000616407 ESCO1Q5FWF5 840 aa16.4■□□□□ 0.22
PPP4R3B-206ENST00000616407 NSD2O96028 1365 aa16.4■□□□□ 0.22
PPP4R3B-206ENST00000616407 USP35Q9P2H5 1018 aa16.4■□□□□ 0.22
PPP4R3B-206ENST00000616407 TRIM44Q96DX7 344 aaPredicted RBP16.39■□□□□ 0.21
PPP4R3B-206ENST00000616407 ZNF330Q9Y3S2 320 aaPredicted RBP16.39■□□□□ 0.21
PPP4R3B-206ENST00000616407 KIAA1211Q6ZU35 1233 aa16.39■□□□□ 0.21
PPP4R3B-206ENST00000616407 ATP10AO60312 1499 aa16.38■□□□□ 0.21
PPP4R3B-206ENST00000616407 DCTN1Q14203 1278 aa16.38■□□□□ 0.21
PPP4R3B-206ENST00000616407 POGZQ7Z3K3 1410 aa16.38■□□□□ 0.21
PPP4R3B-206ENST00000616407 KDM5CP41229 1560 aa16.37■□□□□ 0.21
PPP4R3B-206ENST00000616407 PIK3C2GO75747 1445 aa16.37■□□□□ 0.21
PPP4R3B-206ENST00000616407 GAS2L2Q8NHY3 880 aa16.37■□□□□ 0.21
PPP4R3B-206ENST00000616407 TMEM57Q8N5G2 664 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms