RNA–Protein interactions for RNA: ENST00000616002.1

RABGAP1-213, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene RABGAP1, Length 1,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-213ENST00000616002 UPF1Q92900 1129 aaKnown RBP eCLIP15.58■□□□□ 0.09
RABGAP1-213ENST00000616002 RAB3GAP2Q9H2M9 1393 aa15.58■□□□□ 0.08
RABGAP1-213ENST00000616002 ITGAEP38570 1179 aa15.57■□□□□ 0.08
RABGAP1-213ENST00000616002 ASXL1Q8IXJ9 1541 aa15.56■□□□□ 0.08
RABGAP1-213ENST00000616002 ZNF326Q5BKZ1 582 aaKnown RBP15.56■□□□□ 0.08
RABGAP1-213ENST00000616002 XRN1Q8IZH2 1706 aaKnown RBP15.55■□□□□ 0.08
RABGAP1-213ENST00000616002 SETBP1Q9Y6X0 1596 aa15.54■□□□□ 0.08
RABGAP1-213ENST00000616002 MST1RQ04912 1400 aa15.54■□□□□ 0.08
RABGAP1-213ENST00000616002 LRRC59Q96AG4 307 aaKnown RBP15.53■□□□□ 0.08
RABGAP1-213ENST00000616002 AFF2P51816 1311 aa15.53■□□□□ 0.08
RABGAP1-213ENST00000616002 NRXN3Q9Y4C0 1643 aa15.53■□□□□ 0.08
RABGAP1-213ENST00000616002 CDK12Q9NYV4 1490 aaPredicted RBP15.53■□□□□ 0.08
RABGAP1-213ENST00000616002 TSHZ2Q9NRE2 1034 aa15.53■□□□□ 0.08
RABGAP1-213ENST00000616002 SPHKAPQ2M3C7 1700 aa15.52■□□□□ 0.08
RABGAP1-213ENST00000616002 CCER2I3L3R5 266 aa15.52■□□□□ 0.07
RABGAP1-213ENST00000616002 METP08581 1390 aa15.52■□□□□ 0.07
RABGAP1-213ENST00000616002 NHSL1Q5SYE7 1610 aa15.51■□□□□ 0.07
RABGAP1-213ENST00000616002 C8orf37Q96NL8 207 aa15.5■□□□□ 0.07
RABGAP1-213ENST00000616002 ADGRL3Q9HAR2 1447 aa15.5■□□□□ 0.07
RABGAP1-213ENST00000616002 DDX17Q92841 729 aaKnown RBP15.49■□□□□ 0.07
RABGAP1-213ENST00000616002 ERICH6Q7L0X2 663 aa15.48■□□□□ 0.07
RABGAP1-213ENST00000616002 PNPLA6Q8IY17 1366 aa15.47■□□□□ 0.07
RABGAP1-213ENST00000616002 ANP32EQ9BTT0 268 aa15.47■□□□□ 0.07
RABGAP1-213ENST00000616002 QTRT2Q9H974 415 aaKnown RBP15.47■□□□□ 0.07
RABGAP1-213ENST00000616002 RBM6P78332 1123 aaKnown RBP15.46■□□□□ 0.07
RABGAP1-213ENST00000616002 NALCNQ8IZF0 1738 aa15.46■□□□□ 0.06
RABGAP1-213ENST00000616002 CLTCL1P53675 1640 aa15.45■□□□□ 0.06
RABGAP1-213ENST00000616002 NGLY1Q96IV0 654 aa15.45■□□□□ 0.06
RABGAP1-213ENST00000616002 NEXMIFQ5QGS0 1516 aa15.44■□□□□ 0.06
RABGAP1-213ENST00000616002 RGS12O14924 1447 aa15.44■□□□□ 0.06
RABGAP1-213ENST00000616002 ADAMTS2O95450 1211 aa15.44■□□□□ 0.06
RABGAP1-213ENST00000616002 C1orf167Q5SNV9 1468 aa15.43■□□□□ 0.06
RABGAP1-213ENST00000616002 KIF1BO60333 1816 aa15.42■□□□□ 0.06
RABGAP1-213ENST00000616002 VGFO15240 615 aaPredicted RBP15.41■□□□□ 0.06
RABGAP1-213ENST00000616002 MSH5O43196 834 aa15.41■□□□□ 0.06
RABGAP1-213ENST00000616002 PTCH1Q13635 1447 aa15.41■□□□□ 0.06
RABGAP1-213ENST00000616002 ORAI2Q96SN7 254 aa15.4■□□□□ 0.06
RABGAP1-213ENST00000616002 ROBO2Q9HCK4 1378 aa15.4■□□□□ 0.06
RABGAP1-213ENST00000616002 SOS2Q07890 1332 aaPredicted RBP15.39■□□□□ 0.05
RABGAP1-213ENST00000616002 LAMC1P11047 1609 aa15.38■□□□□ 0.05
RABGAP1-213ENST00000616002 USP21Q9UK80 565 aa15.38■□□□□ 0.05
RABGAP1-213ENST00000616002 ATAD2Q6PL18 1390 aa15.37■□□□□ 0.05
RABGAP1-213ENST00000616002 TRPC5Q9UL62 973 aaPredicted RBP15.36■□□□□ 0.05
RABGAP1-213ENST00000616002 HFM1A2PYH4 1435 aa15.36■□□□□ 0.05
RABGAP1-213ENST00000616002 RPGRIP1LQ68CZ1 1315 aa15.35■□□□□ 0.05
RABGAP1-213ENST00000616002 NEFLP07196 543 aa15.35■□□□□ 0.05
RABGAP1-213ENST00000616002 NAIPQ13075 1403 aa15.35■□□□□ 0.05
RABGAP1-213ENST00000616002 PRAG1Q86YV5 1406 aa15.34■□□□□ 0.05
RABGAP1-213ENST00000616002 FNBP4Q8N3X1 1017 aaPredicted RBP15.34■□□□□ 0.05
RABGAP1-213ENST00000616002 ANP32CO43423 234 aa15.33■□□□□ 0.05
RABGAP1-213ENST00000616002 ESCO1Q5FWF5 840 aa15.32■□□□□ 0.04
RABGAP1-213ENST00000616002 NPHP3Q7Z494 1330 aa15.32■□□□□ 0.04
RABGAP1-213ENST00000616002 DDX10Q13206 875 aaKnown RBP15.32■□□□□ 0.04
RABGAP1-213ENST00000616002 ERICH6BQ5W0A0 696 aa15.32■□□□□ 0.04
RABGAP1-213ENST00000616002 COL22A1Q8NFW1 1626 aaPredicted RBP15.31■□□□□ 0.04
RABGAP1-213ENST00000616002 ATRNO75882 1429 aa15.3■□□□□ 0.04
RABGAP1-213ENST00000616002 KDM2AQ9Y2K7 1162 aa15.3■□□□□ 0.04
RABGAP1-213ENST00000616002 PPLO60437 1756 aa15.3■□□□□ 0.04
RABGAP1-213ENST00000616002 CDC42BPGQ6DT37 1551 aa15.3■□□□□ 0.04
RABGAP1-213ENST00000616002 MYOM2P54296 1465 aa15.29■□□□□ 0.04
RABGAP1-213ENST00000616002 FOXO3O43524 673 aa15.28■□□□□ 0.04
RABGAP1-213ENST00000616002 XPCQ01831 940 aaPredicted RBP15.28■□□□□ 0.04
RABGAP1-213ENST00000616002 ZRANB1Q9UGI0 708 aa15.28■□□□□ 0.04
RABGAP1-213ENST00000616002 LRPPRCP42704 1394 aaKnown RBP15.28■□□□□ 0.04
RABGAP1-213ENST00000616002 SIN3AQ96ST3 1273 aa15.28■□□□□ 0.04
RABGAP1-213ENST00000616002 PXDNQ92626 1479 aa15.27■□□□□ 0.03
RABGAP1-213ENST00000616002 BCL9LQ86UU0 1499 aa15.26■□□□□ 0.03
RABGAP1-213ENST00000616002 CCDC125Q86Z20 511 aa15.26■□□□□ 0.03
RABGAP1-213ENST00000616002 STK26Q9P289 416 aa15.26■□□□□ 0.03
RABGAP1-213ENST00000616002 MARF1Q9Y4F3 1742 aaKnown RBP15.25■□□□□ 0.03
RABGAP1-213ENST00000616002 NUTM2FA1L443 756 aa15.25■□□□□ 0.03
RABGAP1-213ENST00000616002 GJD4Q96KN9 370 aaPredicted RBP15.25■□□□□ 0.03
RABGAP1-213ENST00000616002 ADGRF5Q8IZF2 1346 aa15.24■□□□□ 0.03
RABGAP1-213ENST00000616002 WAPLQ7Z5K2 1190 aa15.24■□□□□ 0.03
RABGAP1-213ENST00000616002 TONSLQ96HA7 1378 aa15.24■□□□□ 0.03
RABGAP1-213ENST00000616002 SRCAPQ6ZRS2 3230 aa15.24■□□□□ 0.03
RABGAP1-213ENST00000616002 RGL3Q3MIN7 710 aa15.24■□□□□ 0.03
RABGAP1-213ENST00000616002 CCDC144AA2RUR9 1427 aa15.23■□□□□ 0.03
RABGAP1-213ENST00000616002 TECPR2O15040 1411 aa15.23■□□□□ 0.03
RABGAP1-213ENST00000616002 ANKRD30BQ9BXX2 1392 aa15.22■□□□□ 0.03
RABGAP1-213ENST00000616002 UNC5CLQ8IV45 518 aa15.21■□□□□ 0.03
RABGAP1-213ENST00000616002 RBM19Q9Y4C8 960 aaKnown RBP15.21■□□□□ 0.03
RABGAP1-213ENST00000616002 ABCC11Q96J66 1382 aa15.21■□□□□ 0.03
RABGAP1-213ENST00000616002 TMEM132EQ6IEE7 984 aa15.2■□□□□ 0.02
RABGAP1-213ENST00000616002 CNKSR2Q8WXI2 1034 aa15.2■□□□□ 0.02
RABGAP1-213ENST00000616002 EP400Q96L91 3159 aa15.2■□□□□ 0.02
RABGAP1-213ENST00000616002 SPATA31A3Q5VYP0 1347 aa15.2■□□□□ 0.02
RABGAP1-213ENST00000616002 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.19■□□□□ 0.02
RABGAP1-213ENST00000616002 PLEKHH1Q9ULM0 1364 aa15.19■□□□□ 0.02
RABGAP1-213ENST00000616002 KIF1AQ12756 1690 aa15.18■□□□□ 0.02
RABGAP1-213ENST00000616002 FANCIQ9NVI1 1328 aa15.18■□□□□ 0.02
RABGAP1-213ENST00000616002 SPATA31E1Q6ZUB1 1445 aa15.18■□□□□ 0.02
RABGAP1-213ENST00000616002 SLIT2O94813 1529 aa15.18■□□□□ 0.02
RABGAP1-213ENST00000616002 FMN2Q9NZ56 1722 aa15.18■□□□□ 0.02
RABGAP1-213ENST00000616002 TMEM132AQ24JP5 1023 aa15.18■□□□□ 0.02
RABGAP1-213ENST00000616002 KRT28Q7Z3Y7 464 aa15.18■□□□□ 0.02
RABGAP1-213ENST00000616002 RALGAPBQ86X10 1494 aa15.18■□□□□ 0.02
RABGAP1-213ENST00000616002 KNDC1Q76NI1 1749 aa15.17■□□□□ 0.02
RABGAP1-213ENST00000616002 BLMP54132 1417 aaPredicted RBP15.17■□□□□ 0.02
RABGAP1-213ENST00000616002 YTHDC2Q9H6S0 1430 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms