RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 RBM42Q9BTD8 480 aaKnown RBP4.72□□□□□ -1.65
LTN1-207ENST00000614971 SIL1Q9H173 461 aa4.72□□□□□ -1.65
LTN1-207ENST00000614971 FBXW7Q969H0 707 aa4.72□□□□□ -1.65
LTN1-207ENST00000614971 CHMP4BQ9H444 224 aaKnown RBP4.72□□□□□ -1.65
LTN1-207ENST00000614971 PDE3BQ13370 1112 aa4.72□□□□□ -1.65
LTN1-207ENST00000614971 NEUROD6Q96NK8 337 aa4.72□□□□□ -1.65
LTN1-207ENST00000614971 EMILIN1Q9Y6C2 1016 aa4.72□□□□□ -1.65
LTN1-207ENST00000614971 IFT140Q96RY7 1462 aa4.72□□□□□ -1.65
LTN1-207ENST00000614971 MCCP23508 829 aa4.72□□□□□ -1.65
LTN1-207ENST00000614971 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.72□□□□□ -1.65
LTN1-207ENST00000614971 SPINK5Q9NQ38 1064 aaPredicted RBP4.72□□□□□ -1.65
LTN1-207ENST00000614971 KIAA1107Q9UPP5 1409 aa4.72□□□□□ -1.65
LTN1-207ENST00000614971 ANO2Q9NQ90 1003 aa4.72□□□□□ -1.65
LTN1-207ENST00000614971 ERICH3Q5RHP9 1530 aa4.72□□□□□ -1.65
LTN1-207ENST00000614971 FYB1O15117 783 aa4.72□□□□□ -1.65
LTN1-207ENST00000614971 PTCD1O75127 700 aaKnown RBP4.72□□□□□ -1.65
LTN1-207ENST00000614971 HMMRO75330 724 aa4.72□□□□□ -1.65
LTN1-207ENST00000614971 LMOD3Q0VAK6 560 aa4.71□□□□□ -1.65
LTN1-207ENST00000614971 HFM1A2PYH4 1435 aa4.71□□□□□ -1.65
LTN1-207ENST00000614971 MEX3CQ5U5Q3 659 aaKnown RBP4.71□□□□□ -1.65
LTN1-207ENST00000614971 PPP1R1BQ9UD71 204 aaPredicted RBP4.71□□□□□ -1.65
LTN1-207ENST00000614971 NOB1Q9ULX3 412 aaKnown RBP4.71□□□□□ -1.65
LTN1-207ENST00000614971 PTPRKQ15262 1439 aa4.71□□□□□ -1.65
LTN1-207ENST00000614971 APPP05067 770 aa4.71□□□□□ -1.66
LTN1-207ENST00000614971 DNMBPQ6XZF7 1577 aa4.71□□□□□ -1.66
LTN1-207ENST00000614971 RIC3Q7Z5B4 369 aa4.71□□□□□ -1.66
LTN1-207ENST00000614971 DRC7Q8IY82 874 aa4.71□□□□□ -1.66
LTN1-207ENST00000614971 PHF23Q9BUL5 403 aaPredicted RBP4.71□□□□□ -1.66
LTN1-207ENST00000614971 ZRANB1Q9UGI0 708 aa4.71□□□□□ -1.66
LTN1-207ENST00000614971 G3V3G9 751 aa4.71□□□□□ -1.66
LTN1-207ENST00000614971 ADAMTS2O95450 1211 aa4.71□□□□□ -1.66
LTN1-207ENST00000614971 SLC4A2P04920 1241 aa4.71□□□□□ -1.66
LTN1-207ENST00000614971 DCAF8Q5TAQ9 597 aa4.71□□□□□ -1.66
LTN1-207ENST00000614971 FAM83GA6ND36 823 aa4.71□□□□□ -1.66
LTN1-207ENST00000614971 ANXA1P04083 346 aa4.71□□□□□ -1.66
LTN1-207ENST00000614971 ABCC5O15440 1437 aa4.71□□□□□ -1.66
LTN1-207ENST00000614971 PLEKHH2Q8IVE3 1493 aa4.7□□□□□ -1.66
LTN1-207ENST00000614971 CENPQQ7L2Z9 268 aaPredicted RBP4.7□□□□□ -1.66
LTN1-207ENST00000614971 JARID2Q92833 1246 aaPredicted RBP4.7□□□□□ -1.66
LTN1-207ENST00000614971 HMGXB3Q12766 1538 aa4.7□□□□□ -1.66
LTN1-207ENST00000614971 HSPA2P54652 639 aa4.7□□□□□ -1.66
LTN1-207ENST00000614971 TWISTNBQ3B726 338 aaPredicted RBP4.7□□□□□ -1.66
LTN1-207ENST00000614971 TOM1L2Q6ZVM7 507 aa4.7□□□□□ -1.66
LTN1-207ENST00000614971 WWC3Q9ULE0 1092 aa4.7□□□□□ -1.66
LTN1-207ENST00000614971 THOC2Q8NI27 1593 aaKnown RBP4.7□□□□□ -1.66
LTN1-207ENST00000614971 CDK11BP21127 795 aaKnown RBP4.7□□□□□ -1.66
LTN1-207ENST00000614971 NUDT16Q96DE0 195 aaKnown RBP4.7□□□□□ -1.66
LTN1-207ENST00000614971 IL1RAPL2Q9NP60 686 aa4.7□□□□□ -1.66
LTN1-207ENST00000614971 CD109Q6YHK3 1445 aa4.7□□□□□ -1.66
LTN1-207ENST00000614971 PIP4K2AP48426 406 aaPredicted RBP4.7□□□□□ -1.66
LTN1-207ENST00000614971 NEXNQ0ZGT2 675 aa4.7□□□□□ -1.66
LTN1-207ENST00000614971 CHRNA2Q15822 529 aa4.7□□□□□ -1.66
LTN1-207ENST00000614971 MCTP1Q6DN14 999 aa4.7□□□□□ -1.66
LTN1-207ENST00000614971 F6X3S4 739 aa4.69□□□□□ -1.66
LTN1-207ENST00000614971 SURF6O75683 361 aaKnown RBP4.69□□□□□ -1.66
LTN1-207ENST00000614971 MPNDQ8N594 471 aa4.69□□□□□ -1.66
LTN1-207ENST00000614971 IQGAP2Q13576 1575 aa4.69□□□□□ -1.66
LTN1-207ENST00000614971 ABCA10Q8WWZ4 1543 aa4.69□□□□□ -1.66
LTN1-207ENST00000614971 KIAA0586Q9BVV6 1533 aa4.69□□□□□ -1.66
LTN1-207ENST00000614971 MAGI1Q96QZ7 1491 aaPredicted RBP4.69□□□□□ -1.66
LTN1-207ENST00000614971 ZNF530Q6P9A1 599 aaPredicted RBP4.69□□□□□ -1.66
LTN1-207ENST00000614971 PRDM11Q9NQV5 511 aa4.69□□□□□ -1.66
LTN1-207ENST00000614971 GRIN2AQ12879 1464 aa4.69□□□□□ -1.66
LTN1-207ENST00000614971 DIAPH3Q9NSV4 1193 aa4.69□□□□□ -1.66
LTN1-207ENST00000614971 DDX19BQ9UMR2 479 aa4.69□□□□□ -1.66
LTN1-207ENST00000614971 NSD3Q9BZ95 1437 aa4.69□□□□□ -1.66
LTN1-207ENST00000614971 IFIT2P09913 472 aaKnown RBP4.69□□□□□ -1.66
LTN1-207ENST00000614971 HDGFL1Q5TGJ6 251 aa4.69□□□□□ -1.66
LTN1-207ENST00000614971 BICDL1Q6ZP65 573 aa4.69□□□□□ -1.66
LTN1-207ENST00000614971 CABLES1Q8TDN4 633 aa4.69□□□□□ -1.66
LTN1-207ENST00000614971 CAMSAP2Q08AD1 1489 aa4.69□□□□□ -1.66
LTN1-207ENST00000614971 GNAI1P63096 354 aa4.68□□□□□ -1.66
LTN1-207ENST00000614971 VPS53Q5VIR6 699 aa4.68□□□□□ -1.66
LTN1-207ENST00000614971 PDZRN3Q9UPQ7 1066 aa4.68□□□□□ -1.66
LTN1-207ENST00000614971 ANKRD30BQ9BXX2 1392 aa4.68□□□□□ -1.66
LTN1-207ENST00000614971 MPRIPQ6WCQ1 1025 aa4.68□□□□□ -1.66
LTN1-207ENST00000614971 WWC1Q8IX03 1113 aa4.68□□□□□ -1.66
LTN1-207ENST00000614971 THEMISQ8N1K5 641 aaPredicted RBP4.68□□□□□ -1.66
LTN1-207ENST00000614971 DNAJC2Q99543 621 aaKnown RBP4.68□□□□□ -1.66
LTN1-207ENST00000614971 AMOTL2Q9Y2J4 779 aa4.68□□□□□ -1.66
LTN1-207ENST00000614971 TSHZ3Q63HK5 1081 aa4.68□□□□□ -1.66
LTN1-207ENST00000614971 EXOC6BQ9Y2D4 811 aa4.68□□□□□ -1.66
LTN1-207ENST00000614971 EHBP1L1Q8N3D4 1523 aa4.68□□□□□ -1.66
LTN1-207ENST00000614971 RTEL1-TNFRSF6BF6WH68 1400 aa4.68□□□□□ -1.66
LTN1-207ENST00000614971 SMARCA5O60264 1052 aaPredicted RBP4.68□□□□□ -1.66
LTN1-207ENST00000614971 PPFIA3O75145 1194 aa4.68□□□□□ -1.66
LTN1-207ENST00000614971 UBTFL1P0CB47 393 aaPredicted RBP4.68□□□□□ -1.66
LTN1-207ENST00000614971 GPATCH3Q96I76 525 aa4.68□□□□□ -1.66
LTN1-207ENST00000614971 LARP6Q9BRS8 491 aaKnown RBP4.68□□□□□ -1.66
LTN1-207ENST00000614971 CCDC61Q9Y6R9 512 aa4.68□□□□□ -1.66
LTN1-207ENST00000614971 SUPT6HQ7KZ85 1726 aaKnown RBP4.67□□□□□ -1.66
LTN1-207ENST00000614971 NCOA1Q15788 1441 aa4.67□□□□□ -1.66
LTN1-207ENST00000614971 VPS37CA5D8V6 355 aaPredicted RBP4.67□□□□□ -1.66
LTN1-207ENST00000614971 VPS37DQ86XT2 251 aa4.67□□□□□ -1.66
LTN1-207ENST00000614971 RASSF8Q8NHQ8 419 aa4.67□□□□□ -1.66
LTN1-207ENST00000614971 TNNQ9UQP3 1299 aa4.67□□□□□ -1.66
LTN1-207ENST00000614971 DISP3Q9P2K9 1392 aa4.67□□□□□ -1.66
LTN1-207ENST00000614971 ANKLE2Q86XL3 938 aa4.67□□□□□ -1.66
LTN1-207ENST00000614971 G3BP1Q13283 466 aaKnown RBP eCLIP4.67□□□□□ -1.66
LTN1-207ENST00000614971 CCDC27Q2M243 656 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms