RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 RBM6P78332 1123 aaKnown RBP26.62■■□□□ 1.85
SMN2-213ENST00000614240 ESCO1Q5FWF5 840 aa26.62■■□□□ 1.85
SMN2-213ENST00000614240 ANKRD30BQ9BXX2 1392 aa26.58■■□□□ 1.85
SMN2-213ENST00000614240 WAPLQ7Z5K2 1190 aa26.57■■□□□ 1.84
SMN2-213ENST00000614240 NPHP3Q7Z494 1330 aa26.57■■□□□ 1.84
SMN2-213ENST00000614240 LAMC1P11047 1609 aa26.55■■□□□ 1.84
SMN2-213ENST00000614240 NUTM2FA1L443 756 aa26.55■■□□□ 1.84
SMN2-213ENST00000614240 TMEM132EQ6IEE7 984 aa26.55■■□□□ 1.84
SMN2-213ENST00000614240 USP21Q9UK80 565 aa26.55■■□□□ 1.84
SMN2-213ENST00000614240 FOXO3O43524 673 aa26.54■■□□□ 1.84
SMN2-213ENST00000614240 SPATA31E1Q6ZUB1 1445 aa26.54■■□□□ 1.84
SMN2-213ENST00000614240 XPCQ01831 940 aaPredicted RBP26.53■■□□□ 1.84
SMN2-213ENST00000614240 LRPPRCP42704 1394 aaKnown RBP26.53■■□□□ 1.84
SMN2-213ENST00000614240 RGS12O14924 1447 aa26.52■■□□□ 1.84
SMN2-213ENST00000614240 CDC42BPGQ6DT37 1551 aa26.52■■□□□ 1.84
SMN2-213ENST00000614240 TRPC5Q9UL62 973 aaPredicted RBP26.51■■□□□ 1.83
SMN2-213ENST00000614240 ABCC11Q96J66 1382 aa26.49■■□□□ 1.83
SMN2-213ENST00000614240 TECPR2O15040 1411 aa26.48■■□□□ 1.83
SMN2-213ENST00000614240 ACIN1Q9UKV3 1341 aaKnown RBP26.48■■□□□ 1.83
SMN2-213ENST00000614240 FNBP4Q8N3X1 1017 aaPredicted RBP26.47■■□□□ 1.83
SMN2-213ENST00000614240 PLEKHH1Q9ULM0 1364 aa26.46■■□□□ 1.83
SMN2-213ENST00000614240 PIK3C2GO75747 1445 aa26.45■■□□□ 1.82
SMN2-213ENST00000614240 YTHDC2Q9H6S0 1430 aaKnown RBP26.44■■□□□ 1.82
SMN2-213ENST00000614240 PXDNQ92626 1479 aa26.43■■□□□ 1.82
SMN2-213ENST00000614240 COL22A1Q8NFW1 1626 aaPredicted RBP26.42■■□□□ 1.82
SMN2-213ENST00000614240 MYOM2P54296 1465 aa26.42■■□□□ 1.82
SMN2-213ENST00000614240 C14orf93Q9H972 538 aaKnown RBP26.41■■□□□ 1.82
SMN2-213ENST00000614240 IFT172Q9UG01 1749 aa26.41■■□□□ 1.82
SMN2-213ENST00000614240 SIRT1Q96EB6 747 aa26.4■■□□□ 1.82
SMN2-213ENST00000614240 DHX57Q6P158 1386 aaKnown RBP26.4■■□□□ 1.82
SMN2-213ENST00000614240 ATAD2Q6PL18 1390 aa26.4■■□□□ 1.82
SMN2-213ENST00000614240 CFAP70Q5T0N1 1121 aa26.39■■□□□ 1.82
SMN2-213ENST00000614240 ATRNO75882 1429 aa26.39■■□□□ 1.81
SMN2-213ENST00000614240 KRT28Q7Z3Y7 464 aa26.37■■□□□ 1.81
SMN2-213ENST00000614240 KNDC1Q76NI1 1749 aa26.36■■□□□ 1.81
SMN2-213ENST00000614240 SAFB2Q14151 953 aaKnown RBP eCLIP26.36■■□□□ 1.81
SMN2-213ENST00000614240 SPATA31A3Q5VYP0 1347 aa26.36■■□□□ 1.81
SMN2-213ENST00000614240 HAP1P54257 671 aaPredicted RBP26.35■■□□□ 1.81
SMN2-213ENST00000614240 PSME1Q06323 249 aa26.34■■□□□ 1.81
SMN2-213ENST00000614240 PHF8Q9UPP1 1060 aa26.34■■□□□ 1.81
SMN2-213ENST00000614240 PRAM1Q96QH2 718 aa26.33■■□□□ 1.81
SMN2-213ENST00000614240 POGKQ9P215 609 aa26.33■■□□□ 1.81
SMN2-213ENST00000614240 BCL9LQ86UU0 1499 aa26.33■■□□□ 1.81
SMN2-213ENST00000614240 FMN2Q9NZ56 1722 aa26.32■■□□□ 1.8
SMN2-213ENST00000614240 PLEKHG5O94827 1062 aa26.32■■□□□ 1.8
SMN2-213ENST00000614240 GJD4Q96KN9 370 aaPredicted RBP26.32■■□□□ 1.8
SMN2-213ENST00000614240 KIF1AQ12756 1690 aa26.3■■□□□ 1.8
SMN2-213ENST00000614240 RAB3GAP2Q9H2M9 1393 aa26.3■■□□□ 1.8
SMN2-213ENST00000614240 NRXN1Q9ULB1 1477 aa26.3■■□□□ 1.8
SMN2-213ENST00000614240 LMOD2Q6P5Q4 547 aa26.29■■□□□ 1.8
SMN2-213ENST00000614240 UNC5CLQ8IV45 518 aa26.29■■□□□ 1.8
SMN2-213ENST00000614240 MARF1Q9Y4F3 1742 aaKnown RBP26.26■■□□□ 1.79
SMN2-213ENST00000614240 CABLES1Q8TDN4 633 aa26.25■■□□□ 1.79
SMN2-213ENST00000614240 KDM2AQ9Y2K7 1162 aa26.25■■□□□ 1.79
SMN2-213ENST00000614240 TNS3Q68CZ2 1445 aa26.24■■□□□ 1.79
SMN2-213ENST00000614240 PMFBP1Q8TBY8 1022 aa26.23■■□□□ 1.79
SMN2-213ENST00000614240 TRAK1Q9UPV9 953 aa26.23■■□□□ 1.79
SMN2-213ENST00000614240 CCDC125Q86Z20 511 aa26.22■■□□□ 1.79
SMN2-213ENST00000614240 SBNO1A3KN83 1393 aa26.21■■□□□ 1.79
SMN2-213ENST00000614240 SLIT2O94813 1529 aa26.21■■□□□ 1.79
SMN2-213ENST00000614240 DCAF11Q8TEB1 546 aa26.21■■□□□ 1.79
SMN2-213ENST00000614240 HIRIP3Q9BW71 556 aaPredicted RBP26.2■■□□□ 1.78
SMN2-213ENST00000614240 CCDC9Q9Y3X0 531 aaKnown RBP26.2■■□□□ 1.78
SMN2-213ENST00000614240 ARHGEF10O15013 1369 aa26.2■■□□□ 1.78
SMN2-213ENST00000614240 RALGAPBQ86X10 1494 aa26.19■■□□□ 1.78
SMN2-213ENST00000614240 ZRANB1Q9UGI0 708 aa26.19■■□□□ 1.78
SMN2-213ENST00000614240 DLC1Q96QB1 1528 aa26.19■■□□□ 1.78
SMN2-213ENST00000614240 MINK1Q8N4C8 1332 aaPredicted RBP26.18■■□□□ 1.78
SMN2-213ENST00000614240 RGPD8O14715 1765 aaPredicted RBP26.18■■□□□ 1.78
SMN2-213ENST00000614240 USP32Q8NFA0 1604 aa26.17■■□□□ 1.78
SMN2-213ENST00000614240 ANKARQ7Z5J8 1434 aa26.17■■□□□ 1.78
SMN2-213ENST00000614240 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.15■■□□□ 1.78
SMN2-213ENST00000614240 VPS72Q15906 364 aa26.15■■□□□ 1.78
SMN2-213ENST00000614240 SEPT12Q8IYM1 358 aa26.14■■□□□ 1.78
SMN2-213ENST00000614240 EIF3AQ14152 1382 aaKnown RBP26.14■■□□□ 1.78
SMN2-213ENST00000614240 GPRASP1Q5JY77 1395 aa26.14■■□□□ 1.78
SMN2-213ENST00000614240 STAC3Q96MF2 364 aa26.13■■□□□ 1.77
SMN2-213ENST00000614240 ADGRB1O14514 1584 aa26.12■■□□□ 1.77
SMN2-213ENST00000614240 GLI3P10071 1580 aa26.12■■□□□ 1.77
SMN2-213ENST00000614240 FAM83GA6ND36 823 aa26.11■■□□□ 1.77
SMN2-213ENST00000614240 WASLO00401 505 aaPredicted RBP26.1■■□□□ 1.77
SMN2-213ENST00000614240 SF3B2Q13435 895 aaKnown RBP26.1■■□□□ 1.77
SMN2-213ENST00000614240 ADGRB2O60241 1585 aa26.09■■□□□ 1.77
SMN2-213ENST00000614240 A0A0G2JS52 829 aa26.09■■□□□ 1.77
SMN2-213ENST00000614240 MYT1Q01538 1121 aa26.09■■□□□ 1.77
SMN2-213ENST00000614240 NGDNQ8NEJ9 315 aaKnown RBP26.09■■□□□ 1.77
SMN2-213ENST00000614240 BLMP54132 1417 aaPredicted RBP26.07■■□□□ 1.76
SMN2-213ENST00000614240 PAK3O75914 559 aaPredicted RBP26.07■■□□□ 1.76
SMN2-213ENST00000614240 PRR36Q9H6K5 1346 aa26.07■■□□□ 1.76
SMN2-213ENST00000614240 HRCP23327 699 aa26.06■■□□□ 1.76
SMN2-213ENST00000614240 KRT27Q7Z3Y8 459 aa26.05■■□□□ 1.76
SMN2-213ENST00000614240 TULP4Q9NRJ4 1543 aa26.04■■□□□ 1.76
SMN2-213ENST00000614240 PLCH1Q4KWH8 1693 aa26.04■■□□□ 1.76
SMN2-213ENST00000614240 ONECUT3O60422 494 aaPredicted RBP26.04■■□□□ 1.76
SMN2-213ENST00000614240 BTG4Q9NY30 223 aa26.04■■□□□ 1.76
SMN2-213ENST00000614240 NWD2Q9ULI1 1742 aa26.02■■□□□ 1.76
SMN2-213ENST00000614240 DEFB132Q7Z7B7 95 aa26.01■■□□□ 1.75
SMN2-213ENST00000614240 ABCA3Q99758 1704 aa26.01■■□□□ 1.75
SMN2-213ENST00000614240 FAM98CQ17RN3 349 aaKnown RBP26■■□□□ 1.75
SMN2-213ENST00000614240 NUDT16Q96DE0 195 aaKnown RBP25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms