RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 APAF1O14727 1248 aa10.9□□□□□ -0.66
PDE6A-204ENST00000613228 SOX12O15370 315 aa10.9□□□□□ -0.66
PDE6A-204ENST00000613228 KIF16BQ96L93 1317 aa10.9□□□□□ -0.66
PDE6A-204ENST00000613228 GPRASP1Q5JY77 1395 aa10.89□□□□□ -0.67
PDE6A-204ENST00000613228 ZCCHC11Q5TAX3 1644 aaKnown RBP10.89□□□□□ -0.67
PDE6A-204ENST00000613228 API5Q9BZZ5 524 aaKnown RBP10.89□□□□□ -0.67
PDE6A-204ENST00000613228 DNTTIP2Q5QJE6 756 aaKnown RBP10.89□□□□□ -0.67
PDE6A-204ENST00000613228 SAMD9LQ8IVG5 1584 aa10.89□□□□□ -0.67
PDE6A-204ENST00000613228 WDR63Q8IWG1 891 aa10.89□□□□□ -0.67
PDE6A-204ENST00000613228 DDX19BQ9UMR2 479 aa10.89□□□□□ -0.67
PDE6A-204ENST00000613228 ABCC1P33527 1531 aa10.88□□□□□ -0.67
PDE6A-204ENST00000613228 HSCBQ8IWL3 235 aa10.88□□□□□ -0.67
PDE6A-204ENST00000613228 MBD5Q9P267 1494 aa10.88□□□□□ -0.67
PDE6A-204ENST00000613228 NSD3Q9BZ95 1437 aa10.88□□□□□ -0.67
PDE6A-204ENST00000613228 RIPK4P57078 832 aa10.88□□□□□ -0.67
PDE6A-204ENST00000613228 PLXNC1O60486 1568 aa10.87□□□□□ -0.67
PDE6A-204ENST00000613228 C1orf141Q5JVX7 400 aa10.87□□□□□ -0.67
PDE6A-204ENST00000613228 MAP7D2Q96T17 732 aa10.87□□□□□ -0.67
PDE6A-204ENST00000613228 PLEKHG5O94827 1062 aa10.87□□□□□ -0.67
PDE6A-204ENST00000613228 ATP10AO60312 1499 aa10.87□□□□□ -0.67
PDE6A-204ENST00000613228 ANKLE2Q86XL3 938 aa10.87□□□□□ -0.67
PDE6A-204ENST00000613228 ADAMTS8Q9UP79 889 aa10.87□□□□□ -0.67
PDE6A-204ENST00000613228 PSME1Q06323 249 aa10.86□□□□□ -0.67
PDE6A-204ENST00000613228 TNRQ92752 1358 aa10.86□□□□□ -0.67
PDE6A-204ENST00000613228 GPATCH3Q96I76 525 aa10.86□□□□□ -0.67
PDE6A-204ENST00000613228 ZMYND15Q9H091 742 aa10.86□□□□□ -0.67
PDE6A-204ENST00000613228 GOLGA6L3A6NEY3 463 aa10.86□□□□□ -0.67
PDE6A-204ENST00000613228 TNNT3P45378 269 aaPredicted RBP10.85□□□□□ -0.67
PDE6A-204ENST00000613228 MTHFSP49914 203 aa10.85□□□□□ -0.67
PDE6A-204ENST00000613228 ADGRF5Q8IZF2 1346 aa10.85□□□□□ -0.67
PDE6A-204ENST00000613228 GAS2L2Q8NHY3 880 aa10.85□□□□□ -0.67
PDE6A-204ENST00000613228 ASXL1Q8IXJ9 1541 aa10.85□□□□□ -0.67
PDE6A-204ENST00000613228 PTMAP06454 111 aaKnown RBP10.85□□□□□ -0.67
PDE6A-204ENST00000613228 HSP90AB1P08238 724 aaKnown RBP10.84□□□□□ -0.67
PDE6A-204ENST00000613228 GGNBP2Q9H3C7 697 aa10.84□□□□□ -0.67
PDE6A-204ENST00000613228 RRP7AQ9Y3A4 280 aaKnown RBP10.84□□□□□ -0.67
PDE6A-204ENST00000613228 ABCC11Q96J66 1382 aa10.84□□□□□ -0.67
PDE6A-204ENST00000613228 TPM2P07951 284 aa10.84□□□□□ -0.67
PDE6A-204ENST00000613228 ATF3P18847 181 aa10.84□□□□□ -0.67
PDE6A-204ENST00000613228 CRBNQ96SW2 442 aa10.84□□□□□ -0.67
PDE6A-204ENST00000613228 ANKRD36BQ8N2N9 1353 aa10.84□□□□□ -0.67
PDE6A-204ENST00000613228 TTC37Q6PGP7 1564 aa10.84□□□□□ -0.67
PDE6A-204ENST00000613228 DZIP1LQ8IYY4 767 aaKnown RBP10.84□□□□□ -0.67
PDE6A-204ENST00000613228 ZNF428Q96B54 188 aa10.84□□□□□ -0.67
PDE6A-204ENST00000613228 SHROOM2Q13796 1616 aa10.83□□□□□ -0.68
PDE6A-204ENST00000613228 CROCC2H7BZ55 1655 aa10.82□□□□□ -0.68
PDE6A-204ENST00000613228 INSRP06213 1382 aa10.82□□□□□ -0.68
PDE6A-204ENST00000613228 PDE3AQ14432 1141 aa10.82□□□□□ -0.68
PDE6A-204ENST00000613228 MTERF4Q7Z6M4 381 aaKnown RBP10.82□□□□□ -0.68
PDE6A-204ENST00000613228 MAGI2Q86UL8 1455 aa10.82□□□□□ -0.68
PDE6A-204ENST00000613228 A0A0G2JS52 829 aa10.82□□□□□ -0.68
PDE6A-204ENST00000613228 IDI1Q13907 227 aa10.82□□□□□ -0.68
PDE6A-204ENST00000613228 SLC12A5Q9H2X9 1139 aa10.82□□□□□ -0.68
PDE6A-204ENST00000613228 ZFYVE16Q7Z3T8 1539 aa10.82□□□□□ -0.68
PDE6A-204ENST00000613228 COL17A1Q9UMD9 1497 aaPredicted RBP10.82□□□□□ -0.68
PDE6A-204ENST00000613228 DISP3Q9P2K9 1392 aa10.82□□□□□ -0.68
PDE6A-204ENST00000613228 EXOC6Q8TAG9 804 aa10.82□□□□□ -0.68
PDE6A-204ENST00000613228 FAM161AQ3B820 660 aa10.82□□□□□ -0.68
PDE6A-204ENST00000613228 FCHSD2O94868 740 aa10.81□□□□□ -0.68
PDE6A-204ENST00000613228 CABP1Q9NZU7 370 aa10.81□□□□□ -0.68
PDE6A-204ENST00000613228 CLASP1Q7Z460 1538 aa10.81□□□□□ -0.68
PDE6A-204ENST00000613228 MLH3Q9UHC1 1453 aa10.81□□□□□ -0.68
PDE6A-204ENST00000613228 TCP11L2Q8N4U5 519 aa10.81□□□□□ -0.68
PDE6A-204ENST00000613228 TRPM2O94759 1503 aa10.81□□□□□ -0.68
PDE6A-204ENST00000613228 CHAF1AQ13111 956 aaPredicted RBP10.81□□□□□ -0.68
PDE6A-204ENST00000613228 RIMS2Q9UQ26 1411 aa10.8□□□□□ -0.68
PDE6A-204ENST00000613228 C11orf95C9JLR9 678 aaPredicted RBP10.8□□□□□ -0.68
PDE6A-204ENST00000613228 CCDC61Q9Y6R9 512 aa10.8□□□□□ -0.68
PDE6A-204ENST00000613228 NPC1L1Q9UHC9 1359 aa10.8□□□□□ -0.68
PDE6A-204ENST00000613228 TEFQ10587 303 aa10.8□□□□□ -0.68
PDE6A-204ENST00000613228 PARD3Q8TEW0 1356 aa10.79□□□□□ -0.68
PDE6A-204ENST00000613228 NUDT16Q96DE0 195 aaKnown RBP10.79□□□□□ -0.68
PDE6A-204ENST00000613228 NUTM2FA1L443 756 aa10.79□□□□□ -0.68
PDE6A-204ENST00000613228 PDIA4P13667 645 aaKnown RBP10.79□□□□□ -0.68
PDE6A-204ENST00000613228 KIAA1211Q6ZU35 1233 aa10.78□□□□□ -0.68
PDE6A-204ENST00000613228 CDC42BPAQ5VT25 1732 aa10.78□□□□□ -0.68
PDE6A-204ENST00000613228 WASLO00401 505 aaPredicted RBP10.78□□□□□ -0.68
PDE6A-204ENST00000613228 HECW2Q9P2P5 1572 aa10.78□□□□□ -0.68
PDE6A-204ENST00000613228 IQGAP3Q86VI3 1631 aa10.78□□□□□ -0.68
PDE6A-204ENST00000613228 MYOM2P54296 1465 aa10.78□□□□□ -0.68
PDE6A-204ENST00000613228 UNC13BO14795 1591 aa10.77□□□□□ -0.68
PDE6A-204ENST00000613228 APPP05067 770 aa10.77□□□□□ -0.68
PDE6A-204ENST00000613228 PIK3C2GO75747 1445 aa10.77□□□□□ -0.68
PDE6A-204ENST00000613228 DDX58O95786 925 aaKnown RBP10.77□□□□□ -0.69
PDE6A-204ENST00000613228 NLRP6P59044 892 aa10.77□□□□□ -0.69
PDE6A-204ENST00000613228 LTV1Q96GA3 475 aaPredicted RBP10.77□□□□□ -0.69
PDE6A-204ENST00000613228 CLUAP1Q96AJ1 413 aa10.77□□□□□ -0.69
PDE6A-204ENST00000613228 PLEKHO1Q53GL0 409 aaPredicted RBP10.77□□□□□ -0.69
PDE6A-204ENST00000613228 BRPF3Q9ULD4 1205 aa10.76□□□□□ -0.69
PDE6A-204ENST00000613228 KCNJ4P48050 445 aa10.76□□□□□ -0.69
PDE6A-204ENST00000613228 KCNH5Q8NCM2 988 aa10.76□□□□□ -0.69
PDE6A-204ENST00000613228 PROSER2Q86WR7 435 aaPredicted RBP10.76□□□□□ -0.69
PDE6A-204ENST00000613228 TTC5Q8N0Z6 440 aa10.76□□□□□ -0.69
PDE6A-204ENST00000613228 PRKAR2BP31323 418 aa10.76□□□□□ -0.69
PDE6A-204ENST00000613228 TSPYL4Q9UJ04 414 aa10.76□□□□□ -0.69
PDE6A-204ENST00000613228 SLFN5Q08AF3 891 aa10.75□□□□□ -0.69
PDE6A-204ENST00000613228 HSP90AB4PQ58FF6 505 aa10.75□□□□□ -0.69
PDE6A-204ENST00000613228 TET3O43151 1660 aa10.75□□□□□ -0.69
PDE6A-204ENST00000613228 ZFYVE9O95405 1425 aa10.75□□□□□ -0.69
PDE6A-204ENST00000613228 PDE4AP27815 886 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms