RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 BRWD3Q6RI45 1802 aa15.98■□□□□ 0.15
SSX3-204ENST00000612497 MYOM2P54296 1465 aa15.97■□□□□ 0.15
SSX3-204ENST00000612497 PSDA5PKW4 1024 aaPredicted RBP15.97■□□□□ 0.15
SSX3-204ENST00000612497 RALGAPBQ86X10 1494 aa15.95■□□□□ 0.14
SSX3-204ENST00000612497 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.94■□□□□ 0.14
SSX3-204ENST00000612497 LOC105371045A0A1W2PR82 267 aa15.94■□□□□ 0.14
SSX3-204ENST00000612497 UNC5CLQ8IV45 518 aa15.94■□□□□ 0.14
SSX3-204ENST00000612497 GLI3P10071 1580 aa15.94■□□□□ 0.14
SSX3-204ENST00000612497 NPHP3Q7Z494 1330 aa15.94■□□□□ 0.14
SSX3-204ENST00000612497 NUP155O75694 1391 aa15.93■□□□□ 0.14
SSX3-204ENST00000612497 HRCP23327 699 aa15.93■□□□□ 0.14
SSX3-204ENST00000612497 XPCQ01831 940 aaPredicted RBP15.93■□□□□ 0.14
SSX3-204ENST00000612497 ESCO1Q5FWF5 840 aa15.93■□□□□ 0.14
SSX3-204ENST00000612497 SEPT12Q8IYM1 358 aa15.92■□□□□ 0.14
SSX3-204ENST00000612497 SPHKAPQ2M3C7 1700 aa15.91■□□□□ 0.14
SSX3-204ENST00000612497 ROBO2Q9HCK4 1378 aa15.91■□□□□ 0.14
SSX3-204ENST00000612497 FOXO3O43524 673 aa15.9■□□□□ 0.14
SSX3-204ENST00000612497 PXDNQ92626 1479 aa15.89■□□□□ 0.13
SSX3-204ENST00000612497 BAG6P46379 1132 aa15.88■□□□□ 0.13
SSX3-204ENST00000612497 KRT27Q7Z3Y8 459 aa15.88■□□□□ 0.13
SSX3-204ENST00000612497 SLIT2O94813 1529 aa15.88■□□□□ 0.13
SSX3-204ENST00000612497 NEXMIFQ5QGS0 1516 aa15.88■□□□□ 0.13
SSX3-204ENST00000612497 CCDC9Q9Y3X0 531 aaKnown RBP15.87■□□□□ 0.13
SSX3-204ENST00000612497 LRPPRCP42704 1394 aaKnown RBP15.86■□□□□ 0.13
SSX3-204ENST00000612497 HFM1A2PYH4 1435 aa15.85■□□□□ 0.13
SSX3-204ENST00000612497 A0A0G2JS52 829 aa15.84■□□□□ 0.13
SSX3-204ENST00000612497 YY1P25490 414 aa15.84■□□□□ 0.13
SSX3-204ENST00000612497 HAP1P54257 671 aaPredicted RBP15.84■□□□□ 0.13
SSX3-204ENST00000612497 MYT1Q01538 1121 aa15.84■□□□□ 0.13
SSX3-204ENST00000612497 VPS72Q15906 364 aa15.84■□□□□ 0.13
SSX3-204ENST00000612497 KIF1BO60333 1816 aa15.83■□□□□ 0.12
SSX3-204ENST00000612497 NUTM2FA1L443 756 aa15.83■□□□□ 0.12
SSX3-204ENST00000612497 R3HDM1Q15032 1099 aaKnown RBP15.83■□□□□ 0.12
SSX3-204ENST00000612497 VGFO15240 615 aaPredicted RBP15.82■□□□□ 0.12
SSX3-204ENST00000612497 ONECUT3O60422 494 aaPredicted RBP15.82■□□□□ 0.12
SSX3-204ENST00000612497 EN1Q05925 392 aaPredicted RBP15.82■□□□□ 0.12
SSX3-204ENST00000612497 ROCK1Q13464 1354 aa15.82■□□□□ 0.12
SSX3-204ENST00000612497 CDC42BPGQ6DT37 1551 aa15.82■□□□□ 0.12
SSX3-204ENST00000612497 CLTCL1P53675 1640 aa15.82■□□□□ 0.12
SSX3-204ENST00000612497 USP32Q8NFA0 1604 aa15.82■□□□□ 0.12
SSX3-204ENST00000612497 PLEKHG5O94827 1062 aa15.81■□□□□ 0.12
SSX3-204ENST00000612497 SPATA31A3Q5VYP0 1347 aa15.81■□□□□ 0.12
SSX3-204ENST00000612497 PRAG1Q86YV5 1406 aa15.8■□□□□ 0.12
SSX3-204ENST00000612497 PLCH1Q4KWH8 1693 aa15.79■□□□□ 0.12
SSX3-204ENST00000612497 NWD2Q9ULI1 1742 aa15.78■□□□□ 0.12
SSX3-204ENST00000612497 CABLES1Q8TDN4 633 aa15.78■□□□□ 0.12
SSX3-204ENST00000612497 KRT28Q7Z3Y7 464 aa15.77■□□□□ 0.12
SSX3-204ENST00000612497 RGPD1P0DJD0 1748 aa15.77■□□□□ 0.11
SSX3-204ENST00000612497 NAIPQ13075 1403 aa15.77■□□□□ 0.11
SSX3-204ENST00000612497 ITGAEP38570 1179 aa15.76■□□□□ 0.11
SSX3-204ENST00000612497 CCDC144AA2RUR9 1427 aa15.76■□□□□ 0.11
SSX3-204ENST00000612497 FAM98CQ17RN3 349 aaKnown RBP15.75■□□□□ 0.11
SSX3-204ENST00000612497 FAM182BQ5T319 152 aa15.74■□□□□ 0.11
SSX3-204ENST00000612497 WAPLQ7Z5K2 1190 aa15.74■□□□□ 0.11
SSX3-204ENST00000612497 KIF1AQ12756 1690 aa15.73■□□□□ 0.11
SSX3-204ENST00000612497 LMOD2Q6P5Q4 547 aa15.73■□□□□ 0.11
SSX3-204ENST00000612497 STK26Q9P289 416 aa15.73■□□□□ 0.11
SSX3-204ENST00000612497 FAM83GA6ND36 823 aa15.72■□□□□ 0.11
SSX3-204ENST00000612497 PSME1Q06323 249 aa15.72■□□□□ 0.11
SSX3-204ENST00000612497 EZH2Q15910 746 aaKnown RBP15.72■□□□□ 0.11
SSX3-204ENST00000612497 RPGRIP1LQ68CZ1 1315 aa15.71■□□□□ 0.11
SSX3-204ENST00000612497 TNS3Q68CZ2 1445 aa15.71■□□□□ 0.11
SSX3-204ENST00000612497 PPLO60437 1756 aa15.7■□□□□ 0.1
SSX3-204ENST00000612497 FMN2Q9NZ56 1722 aa15.7■□□□□ 0.1
SSX3-204ENST00000612497 RGPD8O14715 1765 aaPredicted RBP15.7■□□□□ 0.1
SSX3-204ENST00000612497 ABCA3Q99758 1704 aa15.69■□□□□ 0.1
SSX3-204ENST00000612497 TNS1Q9HBL0 1735 aaKnown RBP15.69■□□□□ 0.1
SSX3-204ENST00000612497 DCAF8L1A6NGE4 600 aa15.69■□□□□ 0.1
SSX3-204ENST00000612497 DISP2A7MBM2 1401 aa15.68■□□□□ 0.1
SSX3-204ENST00000612497 BTG4Q9NY30 223 aa15.68■□□□□ 0.1
SSX3-204ENST00000612497 PHF8Q9UPP1 1060 aa15.68■□□□□ 0.1
SSX3-204ENST00000612497 NRAPQ86VF7 1730 aa15.67■□□□□ 0.1
SSX3-204ENST00000612497 ARHGEF10O15013 1369 aa15.66■□□□□ 0.1
SSX3-204ENST00000612497 PLEKHH1Q9ULM0 1364 aa15.66■□□□□ 0.1
SSX3-204ENST00000612497 CAMKK2Q96RR4 588 aa15.66■□□□□ 0.1
SSX3-204ENST00000612497 PPP1R1BQ9UD71 204 aaPredicted RBP15.66■□□□□ 0.1
SSX3-204ENST00000612497 SBNO1A3KN83 1393 aa15.65■□□□□ 0.1
SSX3-204ENST00000612497 TRIM37O94972 964 aa15.65■□□□□ 0.1
SSX3-204ENST00000612497 TECPR2O15040 1411 aa15.65■□□□□ 0.1
SSX3-204ENST00000612497 ADGRB2O60241 1585 aa15.64■□□□□ 0.09
SSX3-204ENST00000612497 APBA3O96018 575 aa15.64■□□□□ 0.09
SSX3-204ENST00000612497 TMEM132EQ6IEE7 984 aa15.63■□□□□ 0.09
SSX3-204ENST00000612497 SPATA31A5Q5VU36 1347 aa15.63■□□□□ 0.09
SSX3-204ENST00000612497 SPATA31A7Q8IWB4 1347 aa15.63■□□□□ 0.09
SSX3-204ENST00000612497 IFT172Q9UG01 1749 aa15.63■□□□□ 0.09
SSX3-204ENST00000612497 ABCC11Q96J66 1382 aa15.62■□□□□ 0.09
SSX3-204ENST00000612497 FAM196AQ6ZSG2 479 aa15.62■□□□□ 0.09
SSX3-204ENST00000612497 KNDC1Q76NI1 1749 aa15.62■□□□□ 0.09
SSX3-204ENST00000612497 ADGRF5Q8IZF2 1346 aa15.62■□□□□ 0.09
SSX3-204ENST00000612497 COL14A1Q05707 1796 aaKnown RBP15.62■□□□□ 0.09
SSX3-204ENST00000612497 NBPF8Q3BBV2 869 aa15.61■□□□□ 0.09
SSX3-204ENST00000612497 NBPF14Q5TI25 921 aa15.61■□□□□ 0.09
SSX3-204ENST00000612497 PARD3Q8TEW0 1356 aa15.61■□□□□ 0.09
SSX3-204ENST00000612497 THSD7AQ9UPZ6 1657 aa15.6■□□□□ 0.09
SSX3-204ENST00000612497 NRXN1Q9ULB1 1477 aa15.6■□□□□ 0.09
SSX3-204ENST00000612497 SPON1Q9HCB6 807 aa15.6■□□□□ 0.09
SSX3-204ENST00000612497 RRBP1Q9P2E9 1410 aaKnown RBP15.59■□□□□ 0.09
SSX3-204ENST00000612497 KCNQ2O43526 872 aa15.58■□□□□ 0.08
SSX3-204ENST00000612497 ADRA2BP18089 450 aa15.58■□□□□ 0.08
SSX3-204ENST00000612497 PMFBP1Q8TBY8 1022 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 510.7 ms