RNA–Protein interactions for RNA: ENST00000612303.1

NEAT1-204, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 3 BASIC

Gene NEAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-204ENST00000612303 XRN1Q8IZH2 1706 aaKnown RBP18.33■□□□□ 0.52
NEAT1-204ENST00000612303 SAFB2Q14151 953 aaKnown RBP eCLIP18.33■□□□□ 0.52
NEAT1-204ENST00000612303 ROBO2Q9HCK4 1378 aa18.32■□□□□ 0.52
NEAT1-204ENST00000612303 PLEKHH1Q9ULM0 1364 aa18.32■□□□□ 0.52
NEAT1-204ENST00000612303 MINK1Q8N4C8 1332 aaPredicted RBP18.32■□□□□ 0.52
NEAT1-204ENST00000612303 MYOM1P52179 1685 aa18.31■□□□□ 0.52
NEAT1-204ENST00000612303 PANK3Q9H999 370 aa18.31■□□□□ 0.52
NEAT1-204ENST00000612303 LMTK3Q96Q04 1460 aa18.31■□□□□ 0.52
NEAT1-204ENST00000612303 PER1O15534 1290 aaPredicted RBP18.3■□□□□ 0.52
NEAT1-204ENST00000612303 ATAD2Q6PL18 1390 aa18.3■□□□□ 0.52
NEAT1-204ENST00000612303 NINLQ9Y2I6 1382 aa18.3■□□□□ 0.52
NEAT1-204ENST00000612303 CDK19Q9BWU1 502 aa18.29■□□□□ 0.52
NEAT1-204ENST00000612303 ADGRB2O60241 1585 aa18.27■□□□□ 0.52
NEAT1-204ENST00000612303 CCER2I3L3R5 266 aa18.27■□□□□ 0.52
NEAT1-204ENST00000612303 WASLO00401 505 aaPredicted RBP18.27■□□□□ 0.52
NEAT1-204ENST00000612303 KCNA6P17658 529 aa18.27■□□□□ 0.52
NEAT1-204ENST00000612303 SRPK2P78362 688 aaKnown RBP18.27■□□□□ 0.52
NEAT1-204ENST00000612303 KTN1Q86UP2 1357 aaKnown RBP18.27■□□□□ 0.51
NEAT1-204ENST00000612303 PRKRIP1Q9H875 184 aaPredicted RBP18.26■□□□□ 0.51
NEAT1-204ENST00000612303 CABP2Q9NPB3 220 aa18.26■□□□□ 0.51
NEAT1-204ENST00000612303 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.26■□□□□ 0.51
NEAT1-204ENST00000612303 HSPA2P54652 639 aa18.25■□□□□ 0.51
NEAT1-204ENST00000612303 NWD1Q149M9 1564 aa18.23■□□□□ 0.51
NEAT1-204ENST00000612303 NPC1L1Q9UHC9 1359 aa18.23■□□□□ 0.51
NEAT1-204ENST00000612303 SLC12A5Q9H2X9 1139 aa18.23■□□□□ 0.51
NEAT1-204ENST00000612303 KNSTRNQ9Y448 316 aa18.23■□□□□ 0.51
NEAT1-204ENST00000612303 RALBP1Q15311 655 aa18.22■□□□□ 0.51
NEAT1-204ENST00000612303 TMC1Q8TDI8 760 aa18.22■□□□□ 0.51
NEAT1-204ENST00000612303 STRCQ7RTU9 1775 aa18.22■□□□□ 0.51
NEAT1-204ENST00000612303 ANKRD36BQ8N2N9 1353 aa18.2■□□□□ 0.5
NEAT1-204ENST00000612303 TERF2IPQ9NYB0 399 aa18.19■□□□□ 0.5
NEAT1-204ENST00000612303 AMER1Q5JTC6 1135 aaPredicted RBP18.18■□□□□ 0.5
NEAT1-204ENST00000612303 NUDT16Q96DE0 195 aaKnown RBP18.18■□□□□ 0.5
NEAT1-204ENST00000612303 CARD14Q9BXL6 1004 aa18.18■□□□□ 0.5
NEAT1-204ENST00000612303 CCDC61Q9Y6R9 512 aa18.18■□□□□ 0.5
NEAT1-204ENST00000612303 NKTRP30414 1462 aaKnown RBP18.18■□□□□ 0.5
NEAT1-204ENST00000612303 PARD3Q8TEW0 1356 aa18.17■□□□□ 0.5
NEAT1-204ENST00000612303 ATP7BP35670 1465 aa18.16■□□□□ 0.5
NEAT1-204ENST00000612303 USP32Q8NFA0 1604 aa18.16■□□□□ 0.5
NEAT1-204ENST00000612303 HDGFL2Q7Z4V5 671 aaPredicted RBP18.15■□□□□ 0.5
NEAT1-204ENST00000612303 CABP1Q9NZU7 370 aa18.15■□□□□ 0.5
NEAT1-204ENST00000612303 DMRT2Q9Y5R5 561 aa18.14■□□□□ 0.49
NEAT1-204ENST00000612303 NCOA3Q9Y6Q9 1424 aa18.14■□□□□ 0.49
NEAT1-204ENST00000612303 PLEKHG3A1L390 1219 aa18.13■□□□□ 0.49
NEAT1-204ENST00000612303 PROSER2Q86WR7 435 aaPredicted RBP18.13■□□□□ 0.49
NEAT1-204ENST00000612303 PRR36Q9H6K5 1346 aa18.13■□□□□ 0.49
NEAT1-204ENST00000612303 PPIP5K1Q6PFW1 1433 aa18.13■□□□□ 0.49
NEAT1-204ENST00000612303 ANKARQ7Z5J8 1434 aa18.13■□□□□ 0.49
NEAT1-204ENST00000612303 NSD3Q9BZ95 1437 aa18.13■□□□□ 0.49
NEAT1-204ENST00000612303 ADGRL3Q9HAR2 1447 aa18.13■□□□□ 0.49
NEAT1-204ENST00000612303 CD163L1Q9NR16 1453 aa18.13■□□□□ 0.49
NEAT1-204ENST00000612303 CDC42BPGQ6DT37 1551 aa18.13■□□□□ 0.49
NEAT1-204ENST00000612303 MYBBP1AQ9BQG0 1328 aaKnown RBP18.12■□□□□ 0.49
NEAT1-204ENST00000612303 A0A1W2PP64 1363 aa18.12■□□□□ 0.49
NEAT1-204ENST00000612303 NALCNQ8IZF0 1738 aa18.12■□□□□ 0.49
NEAT1-204ENST00000612303 FMN2Q9NZ56 1722 aa18.12■□□□□ 0.49
NEAT1-204ENST00000612303 CC2D1BQ5T0F9 858 aaKnown RBP18.11■□□□□ 0.49
NEAT1-204ENST00000612303 ZNF692Q9BU19 519 aaPredicted RBP18.11■□□□□ 0.49
NEAT1-204ENST00000612303 CGNL1Q0VF96 1302 aa18.11■□□□□ 0.49
NEAT1-204ENST00000612303 CPSF1Q10570 1443 aaKnown RBP18.11■□□□□ 0.49
NEAT1-204ENST00000612303 TOPAZ1Q8N9V7 1692 aa18.11■□□□□ 0.49
NEAT1-204ENST00000612303 ITSN1Q15811 1721 aa18.11■□□□□ 0.49
NEAT1-204ENST00000612303 NSD2O96028 1365 aa18.1■□□□□ 0.49
NEAT1-204ENST00000612303 STRCP1A6NGW2 1772 aa18.09■□□□□ 0.49
NEAT1-204ENST00000612303 AKAP12Q02952 1782 aa18.08■□□□□ 0.48
NEAT1-204ENST00000612303 BRD4O60885 1362 aaPredicted RBP18.07■□□□□ 0.48
NEAT1-204ENST00000612303 NLRP13Q86W25 1043 aa18.07■□□□□ 0.48
NEAT1-204ENST00000612303 C19orf44Q9H6X5 657 aa18.07■□□□□ 0.48
NEAT1-204ENST00000612303 CNGB1Q14028 1251 aaPredicted RBP18.06■□□□□ 0.48
NEAT1-204ENST00000612303 RGPD8O14715 1765 aaPredicted RBP18.06■□□□□ 0.48
NEAT1-204ENST00000612303 MON2Q7Z3U7 1717 aa18.06■□□□□ 0.48
NEAT1-204ENST00000612303 EDC4Q6P2E9 1401 aaKnown RBP18.06■□□□□ 0.48
NEAT1-204ENST00000612303 C14orf37Q86TY3 774 aa18.05■□□□□ 0.48
NEAT1-204ENST00000612303 MRS2Q9HD23 443 aa18.05■□□□□ 0.48
NEAT1-204ENST00000612303 TMEM94Q12767 1356 aa18.04■□□□□ 0.48
NEAT1-204ENST00000612303 ACEP12821 1306 aa18.03■□□□□ 0.48
NEAT1-204ENST00000612303 CCDC184Q52MB2 194 aa18.03■□□□□ 0.48
NEAT1-204ENST00000612303 DCCP43146 1447 aa18.03■□□□□ 0.48
NEAT1-204ENST00000612303 POLR3AO14802 1390 aaPredicted RBP18.03■□□□□ 0.48
NEAT1-204ENST00000612303 NUTM2FA1L443 756 aa18.02■□□□□ 0.48
NEAT1-204ENST00000612303 FYB1O15117 783 aa18.02■□□□□ 0.48
NEAT1-204ENST00000612303 PPP2R1AP30153 589 aa18.02■□□□□ 0.48
NEAT1-204ENST00000612303 MORC1Q86VD1 984 aa18.02■□□□□ 0.48
NEAT1-204ENST00000612303 RBM33Q96EV2 1170 aaKnown RBP18.02■□□□□ 0.48
NEAT1-204ENST00000612303 ANKRD26Q9UPS8 1709 aa18.02■□□□□ 0.48
NEAT1-204ENST00000612303 KIF20BQ96Q89 1820 aa18.01■□□□□ 0.47
NEAT1-204ENST00000612303 NGDNQ8NEJ9 315 aaKnown RBP17.99■□□□□ 0.47
NEAT1-204ENST00000612303 USP6P35125 1406 aa17.98■□□□□ 0.47
NEAT1-204ENST00000612303 ATF3P18847 181 aa17.98■□□□□ 0.47
NEAT1-204ENST00000612303 PHF8Q9UPP1 1060 aa17.98■□□□□ 0.47
NEAT1-204ENST00000612303 XIRP1Q702N8 1843 aaKnown RBP17.98■□□□□ 0.47
NEAT1-204ENST00000612303 LRRC7Q96NW7 1537 aa17.98■□□□□ 0.47
NEAT1-204ENST00000612303 SSH2Q76I76 1423 aa17.98■□□□□ 0.47
NEAT1-204ENST00000612303 ZNF335Q9H4Z2 1342 aaPredicted RBP17.98■□□□□ 0.47
NEAT1-204ENST00000612303 CADPS2Q86UW7 1296 aa17.97■□□□□ 0.47
NEAT1-204ENST00000612303 PNISRQ8TF01 805 aaKnown RBP17.97■□□□□ 0.47
NEAT1-204ENST00000612303 TTC21BQ7Z4L5 1316 aa17.97■□□□□ 0.47
NEAT1-204ENST00000612303 TTC21AQ8NDW8 1320 aa17.97■□□□□ 0.47
NEAT1-204ENST00000612303 NRKQ7Z2Y5 1582 aa17.96■□□□□ 0.47
NEAT1-204ENST00000612303 MSH6P52701 1360 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms