RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 BRMS1Q9HCU9 246 aa14.84□□□□□ -0.03
HLCS-207ENST00000612277 ZNHIT6Q9NWK9 470 aaKnown RBP14.84□□□□□ -0.03
HLCS-207ENST00000612277 PIP4K2AP48426 406 aaPredicted RBP14.84□□□□□ -0.03
HLCS-207ENST00000612277 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.84□□□□□ -0.03
HLCS-207ENST00000612277 PAK3O75914 559 aaPredicted RBP14.83□□□□□ -0.03
HLCS-207ENST00000612277 CEP63Q96MT8 703 aa14.83□□□□□ -0.04
HLCS-207ENST00000612277 SPATA24Q86W54 205 aa14.83□□□□□ -0.04
HLCS-207ENST00000612277 C22orf23Q9BZE7 217 aa14.83□□□□□ -0.04
HLCS-207ENST00000612277 GOLGA6L10A0A0M3HER8 536 aa14.83□□□□□ -0.04
HLCS-207ENST00000612277 NLRP13Q86W25 1043 aa14.83□□□□□ -0.04
HLCS-207ENST00000612277 BCCIPQ9P287 314 aaKnown RBP eCLIP14.83□□□□□ -0.04
HLCS-207ENST00000612277 LUC7LQ9NQ29 371 aaKnown RBP14.82□□□□□ -0.04
HLCS-207ENST00000612277 IFIT2P09913 472 aaKnown RBP14.82□□□□□ -0.04
HLCS-207ENST00000612277 IBSPP21815 317 aaPredicted RBP14.82□□□□□ -0.04
HLCS-207ENST00000612277 RBM25P49756 843 aaKnown RBP14.82□□□□□ -0.04
HLCS-207ENST00000612277 CCDC91Q7Z6B0 441 aa14.82□□□□□ -0.04
HLCS-207ENST00000612277 PLIN1O60240 522 aa14.81□□□□□ -0.04
HLCS-207ENST00000612277 KINO60870 393 aaKnown RBP14.81□□□□□ -0.04
HLCS-207ENST00000612277 MAP2K1Q02750 393 aaPredicted RBP14.81□□□□□ -0.04
HLCS-207ENST00000612277 IPO4Q8TEX9 1081 aaKnown RBP14.81□□□□□ -0.04
HLCS-207ENST00000612277 MYO15BQ96JP2 1530 aa14.81□□□□□ -0.04
HLCS-207ENST00000612277 FAM107BQ9H098 131 aa14.81□□□□□ -0.04
HLCS-207ENST00000612277 GTF2E1P29083 439 aaPredicted RBP14.8□□□□□ -0.04
HLCS-207ENST00000612277 BRPF1P55201 1214 aaPredicted RBP14.8□□□□□ -0.04
HLCS-207ENST00000612277 PPFIBP1Q86W92 1011 aa14.8□□□□□ -0.04
HLCS-207ENST00000612277 STK26Q9P289 416 aa14.8□□□□□ -0.04
HLCS-207ENST00000612277 E9PSI1 815 aa14.79□□□□□ -0.04
HLCS-207ENST00000612277 PRDM10Q9NQV6 1147 aa14.79□□□□□ -0.04
HLCS-207ENST00000612277 CFAP45Q9UL16 551 aa14.79□□□□□ -0.04
HLCS-207ENST00000612277 DDX19BQ9UMR2 479 aa14.79□□□□□ -0.04
HLCS-207ENST00000612277 CCNB3Q8WWL7 1395 aa14.79□□□□□ -0.04
HLCS-207ENST00000612277 MICALCLQ6ZW33 695 aa14.79□□□□□ -0.04
HLCS-207ENST00000612277 XBP1P17861 261 aa14.79□□□□□ -0.04
HLCS-207ENST00000612277 TMCO3Q6UWJ1 677 aa14.78□□□□□ -0.04
HLCS-207ENST00000612277 COG6Q9Y2V7 657 aa14.78□□□□□ -0.04
HLCS-207ENST00000612277 SERPINC1P01008 464 aa14.78□□□□□ -0.04
HLCS-207ENST00000612277 PAF1Q8N7H5 531 aa14.78□□□□□ -0.04
HLCS-207ENST00000612277 TXLNAP40222 546 aa14.78□□□□□ -0.04
HLCS-207ENST00000612277 SETD5Q9C0A6 1442 aa14.78□□□□□ -0.04
HLCS-207ENST00000612277 PPM1EQ8WY54 764 aa14.78□□□□□ -0.04
HLCS-207ENST00000612277 STAMBPO95630 424 aa14.77□□□□□ -0.04
HLCS-207ENST00000612277 GBP3Q9H0R5 595 aa14.77□□□□□ -0.04
HLCS-207ENST00000612277 SEPT11Q9NVA2 429 aaKnown RBP14.77□□□□□ -0.05
HLCS-207ENST00000612277 CGNQ9P2M7 1197 aaKnown RBP14.77□□□□□ -0.05
HLCS-207ENST00000612277 ROCK1Q13464 1354 aa14.77□□□□□ -0.05
HLCS-207ENST00000612277 PRPF40AO75400 957 aaKnown RBP14.77□□□□□ -0.05
HLCS-207ENST00000612277 FMNL2Q96PY5 1086 aa14.77□□□□□ -0.05
HLCS-207ENST00000612277 CBFA2T2O43439 604 aa14.76□□□□□ -0.05
HLCS-207ENST00000612277 CBX1P83916 185 aa14.76□□□□□ -0.05
HLCS-207ENST00000612277 KIF15Q9NS87 1388 aa14.76□□□□□ -0.05
HLCS-207ENST00000612277 CCDC27Q2M243 656 aa14.76□□□□□ -0.05
HLCS-207ENST00000612277 BCL2L13Q9BXK5 485 aa14.76□□□□□ -0.05
HLCS-207ENST00000612277 TNNT1P13805 278 aa14.76□□□□□ -0.05
HLCS-207ENST00000612277 DACH1Q9UI36 760 aa14.76□□□□□ -0.05
HLCS-207ENST00000612277 MYBBP1AQ9BQG0 1328 aaKnown RBP14.75□□□□□ -0.05
HLCS-207ENST00000612277 CCDC192P0DO97 292 aa14.75□□□□□ -0.05
HLCS-207ENST00000612277 GRPEL1Q9HAV7 217 aa14.75□□□□□ -0.05
HLCS-207ENST00000612277 TERF2IPQ9NYB0 399 aa14.75□□□□□ -0.05
HLCS-207ENST00000612277 PSMA5P28066 241 aa14.75□□□□□ -0.05
HLCS-207ENST00000612277 ZNF396Q96N95 335 aaPredicted RBP14.75□□□□□ -0.05
HLCS-207ENST00000612277 CRACR2AQ9BSW2 395 aa14.74□□□□□ -0.05
HLCS-207ENST00000612277 CFAP57Q96MR6 1250 aa14.74□□□□□ -0.05
HLCS-207ENST00000612277 LRRFIP2Q9Y608 721 aaKnown RBP14.74□□□□□ -0.05
HLCS-207ENST00000612277 RALYLQ86SE5 291 aaKnown RBP14.74□□□□□ -0.05
HLCS-207ENST00000612277 FAM177A1Q8N128 213 aaPredicted RBP14.74□□□□□ -0.05
HLCS-207ENST00000612277 CDC45O75419 566 aa14.74□□□□□ -0.05
HLCS-207ENST00000612277 RRP7AQ9Y3A4 280 aaKnown RBP14.74□□□□□ -0.05
HLCS-207ENST00000612277 TNIKQ9UKE5 1360 aa14.74□□□□□ -0.05
HLCS-207ENST00000612277 CLGNO14967 610 aa14.73□□□□□ -0.05
HLCS-207ENST00000612277 RNF187Q5TA31 235 aaPredicted RBP14.73□□□□□ -0.05
HLCS-207ENST00000612277 GTF2A1P52655 376 aaPredicted RBP14.73□□□□□ -0.05
HLCS-207ENST00000612277 ERC2O15083 957 aa14.73□□□□□ -0.05
HLCS-207ENST00000612277 UBXN4Q92575 508 aa14.73□□□□□ -0.05
HLCS-207ENST00000612277 ZBED9Q6R2W3 1325 aa14.73□□□□□ -0.05
HLCS-207ENST00000612277 CDK5RAP3Q96JB5 506 aa14.73□□□□□ -0.05
HLCS-207ENST00000612277 CCDC148Q8NFR7 591 aa14.72□□□□□ -0.05
HLCS-207ENST00000612277 C9orf78Q9NZ63 289 aaPredicted RBP14.72□□□□□ -0.05
HLCS-207ENST00000612277 NINLQ9Y2I6 1382 aa14.71□□□□□ -0.05
HLCS-207ENST00000612277 JAKMIP3Q5VZ66 844 aa14.71□□□□□ -0.05
HLCS-207ENST00000612277 HOMEZQ8IX15 550 aa14.71□□□□□ -0.05
HLCS-207ENST00000612277 ESPNB1AK53 854 aa14.71□□□□□ -0.06
HLCS-207ENST00000612277 MAP9Q49MG5 647 aa14.71□□□□□ -0.06
HLCS-207ENST00000612277 G3BP1Q13283 466 aaKnown RBP eCLIP14.7□□□□□ -0.06
HLCS-207ENST00000612277 CEP164Q9UPV0 1460 aa14.7□□□□□ -0.06
HLCS-207ENST00000612277 WWC2Q6AWC2 1192 aa14.7□□□□□ -0.06
HLCS-207ENST00000612277 TRERF1Q96PN7 1200 aa14.7□□□□□ -0.06
HLCS-207ENST00000612277 IRX3P78415 501 aaPredicted RBP14.7□□□□□ -0.06
HLCS-207ENST00000612277 MCM3P25205 808 aa14.7□□□□□ -0.06
HLCS-207ENST00000612277 DZIP1LQ8IYY4 767 aaKnown RBP14.7□□□□□ -0.06
HLCS-207ENST00000612277 PDCL3Q9H2J4 239 aa14.7□□□□□ -0.06
HLCS-207ENST00000612277 TNMDQ9H2S6 317 aa14.7□□□□□ -0.06
HLCS-207ENST00000612277 AMPHP49418 695 aa14.69□□□□□ -0.06
HLCS-207ENST00000612277 WRNQ14191 1432 aaPredicted RBP eCLIP14.69□□□□□ -0.06
HLCS-207ENST00000612277 SMC1AQ14683 1233 aaKnown RBP14.69□□□□□ -0.06
HLCS-207ENST00000612277 TAF4BQ92750 862 aa14.69□□□□□ -0.06
HLCS-207ENST00000612277 API5Q9BZZ5 524 aaKnown RBP14.69□□□□□ -0.06
HLCS-207ENST00000612277 ELL2O00472 640 aaPredicted RBP14.69□□□□□ -0.06
HLCS-207ENST00000612277 PDCP20941 246 aa14.69□□□□□ -0.06
HLCS-207ENST00000612277 UBE2Q2Q8WVN8 375 aa14.69□□□□□ -0.06
HLCS-207ENST00000612277 MCM2P49736 904 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms