RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 CENPJQ9HC77 1338 aaPredicted RBP27.12■■□□□ 1.93
SRRM3-205ENST00000612155 EIF3AQ14152 1382 aaKnown RBP27.11■■□□□ 1.93
SRRM3-205ENST00000612155 MINK1Q8N4C8 1332 aaPredicted RBP27.1■■□□□ 1.93
SRRM3-205ENST00000612155 TECPR2O15040 1411 aa27.1■■□□□ 1.93
SRRM3-205ENST00000612155 TESK2Q96S53 571 aa27.09■■□□□ 1.93
SRRM3-205ENST00000612155 KNDC1Q76NI1 1749 aa27.09■■□□□ 1.93
SRRM3-205ENST00000612155 CPS1P31327 1500 aa27.09■■□□□ 1.93
SRRM3-205ENST00000612155 QRICH2Q9H0J4 1663 aa27.07■■□□□ 1.92
SRRM3-205ENST00000612155 DLC1Q96QB1 1528 aa27.06■■□□□ 1.92
SRRM3-205ENST00000612155 PROSER2Q86WR7 435 aaPredicted RBP27.05■■□□□ 1.92
SRRM3-205ENST00000612155 NWD1Q149M9 1564 aa27.04■■□□□ 1.92
SRRM3-205ENST00000612155 POLR3GLQ9BT43 218 aa27.04■■□□□ 1.92
SRRM3-205ENST00000612155 PTCH1Q13635 1447 aa27.04■■□□□ 1.92
SRRM3-205ENST00000612155 FAM135BQ49AJ0 1406 aa27.02■■□□□ 1.92
SRRM3-205ENST00000612155 DISP3Q9P2K9 1392 aa27.02■■□□□ 1.92
SRRM3-205ENST00000612155 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.02■■□□□ 1.92
SRRM3-205ENST00000612155 C14orf37Q86TY3 774 aa26.99■■□□□ 1.91
SRRM3-205ENST00000612155 SIRT1Q96EB6 747 aa26.99■■□□□ 1.91
SRRM3-205ENST00000612155 NUTM2FA1L443 756 aa26.98■■□□□ 1.91
SRRM3-205ENST00000612155 TMEM94Q12767 1356 aa26.97■■□□□ 1.91
SRRM3-205ENST00000612155 NKTRP30414 1462 aaKnown RBP26.95■■□□□ 1.91
SRRM3-205ENST00000612155 CABP2Q9NPB3 220 aa26.95■■□□□ 1.9
SRRM3-205ENST00000612155 TULP4Q9NRJ4 1543 aa26.95■■□□□ 1.9
SRRM3-205ENST00000612155 TMF1P82094 1093 aa26.94■■□□□ 1.9
SRRM3-205ENST00000612155 CCDC184Q52MB2 194 aa26.94■■□□□ 1.9
SRRM3-205ENST00000612155 PRKRIP1Q9H875 184 aaPredicted RBP26.94■■□□□ 1.9
SRRM3-205ENST00000612155 NALCNQ8IZF0 1738 aa26.93■■□□□ 1.9
SRRM3-205ENST00000612155 CDK19Q9BWU1 502 aa26.92■■□□□ 1.9
SRRM3-205ENST00000612155 LRRC7Q96NW7 1537 aa26.92■■□□□ 1.9
SRRM3-205ENST00000612155 SRPK2P78362 688 aaKnown RBP26.91■■□□□ 1.9
SRRM3-205ENST00000612155 SBNO2Q9Y2G9 1366 aa26.91■■□□□ 1.9
SRRM3-205ENST00000612155 XIRP1Q702N8 1843 aaKnown RBP26.89■■□□□ 1.9
SRRM3-205ENST00000612155 EVC2Q86UK5 1308 aa26.89■■□□□ 1.9
SRRM3-205ENST00000612155 WASLO00401 505 aaPredicted RBP26.89■■□□□ 1.9
SRRM3-205ENST00000612155 LTBP4Q8N2S1 1624 aa26.87■■□□□ 1.89
SRRM3-205ENST00000612155 ADGRL3Q9HAR2 1447 aa26.86■■□□□ 1.89
SRRM3-205ENST00000612155 PRR36Q9H6K5 1346 aa26.82■■□□□ 1.88
SRRM3-205ENST00000612155 C19orf44Q9H6X5 657 aa26.82■■□□□ 1.88
SRRM3-205ENST00000612155 ADGRB2O60241 1585 aa26.82■■□□□ 1.88
SRRM3-205ENST00000612155 TMC1Q8TDI8 760 aa26.81■■□□□ 1.88
SRRM3-205ENST00000612155 NUDT16Q96DE0 195 aaKnown RBP26.79■■□□□ 1.88
SRRM3-205ENST00000612155 SLC12A5Q9H2X9 1139 aa26.78■■□□□ 1.88
SRRM3-205ENST00000612155 MSH6P52701 1360 aa26.78■■□□□ 1.88
SRRM3-205ENST00000612155 RGPD8O14715 1765 aaPredicted RBP26.78■■□□□ 1.88
SRRM3-205ENST00000612155 SLC24A1O60721 1099 aa26.76■■□□□ 1.87
SRRM3-205ENST00000612155 ATF3P18847 181 aa26.76■■□□□ 1.87
SRRM3-205ENST00000612155 CDCA8Q53HL2 280 aa26.76■■□□□ 1.87
SRRM3-205ENST00000612155 CDC42BPGQ6DT37 1551 aa26.76■■□□□ 1.87
SRRM3-205ENST00000612155 USP32Q8NFA0 1604 aa26.75■■□□□ 1.87
SRRM3-205ENST00000612155 CABP1Q9NZU7 370 aa26.75■■□□□ 1.87
SRRM3-205ENST00000612155 FMN2Q9NZ56 1722 aa26.75■■□□□ 1.87
SRRM3-205ENST00000612155 ATP7BP35670 1465 aa26.74■■□□□ 1.87
SRRM3-205ENST00000612155 PMFBP1Q8TBY8 1022 aa26.73■■□□□ 1.87
SRRM3-205ENST00000612155 SUPT16HQ9Y5B9 1047 aaKnown RBP26.73■■□□□ 1.87
SRRM3-205ENST00000612155 NCOA3Q9Y6Q9 1424 aa26.73■■□□□ 1.87
SRRM3-205ENST00000612155 MYOM1P52179 1685 aa26.72■■□□□ 1.87
SRRM3-205ENST00000612155 ORAI2Q96SN7 254 aa26.71■■□□□ 1.87
SRRM3-205ENST00000612155 PPIP5K1Q6PFW1 1433 aa26.7■■□□□ 1.87
SRRM3-205ENST00000612155 HNRNPUQ00839 825 aaKnown RBP eCLIP26.7■■□□□ 1.87
SRRM3-205ENST00000612155 MRS2Q9HD23 443 aa26.7■■□□□ 1.87
SRRM3-205ENST00000612155 ESCO1Q5FWF5 840 aa26.7■■□□□ 1.86
SRRM3-205ENST00000612155 CCDC61Q9Y6R9 512 aa26.7■■□□□ 1.86
SRRM3-205ENST00000612155 ATAD2Q6PL18 1390 aa26.69■■□□□ 1.86
SRRM3-205ENST00000612155 CADPS2Q86UW7 1296 aa26.69■■□□□ 1.86
SRRM3-205ENST00000612155 CNGB1Q14028 1251 aaPredicted RBP26.68■■□□□ 1.86
SRRM3-205ENST00000612155 MST1RQ04912 1400 aa26.68■■□□□ 1.86
SRRM3-205ENST00000612155 PANK3Q9H999 370 aa26.67■■□□□ 1.86
SRRM3-205ENST00000612155 C1orf167Q5SNV9 1468 aa26.65■■□□□ 1.86
SRRM3-205ENST00000612155 DCCP43146 1447 aa26.65■■□□□ 1.86
SRRM3-205ENST00000612155 PUS7Q96PZ0 661 aaKnown RBP26.65■■□□□ 1.86
SRRM3-205ENST00000612155 FAM9BQ8IZU0 186 aa26.64■■□□□ 1.85
SRRM3-205ENST00000612155 SLAIN2Q9P270 581 aa26.64■■□□□ 1.85
SRRM3-205ENST00000612155 DDX17Q92841 729 aaKnown RBP26.63■■□□□ 1.85
SRRM3-205ENST00000612155 TOPAZ1Q8N9V7 1692 aa26.63■■□□□ 1.85
SRRM3-205ENST00000612155 ANKARQ7Z5J8 1434 aa26.62■■□□□ 1.85
SRRM3-205ENST00000612155 CERKQ8TCT0 537 aa26.62■■□□□ 1.85
SRRM3-205ENST00000612155 ACEP12821 1306 aa26.61■■□□□ 1.85
SRRM3-205ENST00000612155 CD163L1Q9NR16 1453 aa26.61■■□□□ 1.85
SRRM3-205ENST00000612155 A0A1W2PP64 1363 aa26.61■■□□□ 1.85
SRRM3-205ENST00000612155 CARD14Q9BXL6 1004 aa26.61■■□□□ 1.85
SRRM3-205ENST00000612155 PHF8Q9UPP1 1060 aa26.61■■□□□ 1.85
SRRM3-205ENST00000612155 XPCQ01831 940 aaPredicted RBP26.6■■□□□ 1.85
SRRM3-205ENST00000612155 NGDNQ8NEJ9 315 aaKnown RBP26.6■■□□□ 1.85
SRRM3-205ENST00000612155 FOXO3O43524 673 aa26.58■■□□□ 1.85
SRRM3-205ENST00000612155 ITSN1Q15811 1721 aa26.58■■□□□ 1.85
SRRM3-205ENST00000612155 PLEKHG3A1L390 1219 aa26.57■■□□□ 1.84
SRRM3-205ENST00000612155 PIP4K2BP78356 416 aa26.56■■□□□ 1.84
SRRM3-205ENST00000612155 BRINP3Q76B58 766 aa26.56■■□□□ 1.84
SRRM3-205ENST00000612155 PER1O15534 1290 aaPredicted RBP26.55■■□□□ 1.84
SRRM3-205ENST00000612155 TERF2IPQ9NYB0 399 aa26.55■■□□□ 1.84
SRRM3-205ENST00000612155 ANKRD36BQ8N2N9 1353 aa26.55■■□□□ 1.84
SRRM3-205ENST00000612155 UBAP1LF5GYI3 381 aa26.54■■□□□ 1.84
SRRM3-205ENST00000612155 HDGFL2Q7Z4V5 671 aaPredicted RBP26.54■■□□□ 1.84
SRRM3-205ENST00000612155 KTN1Q86UP2 1357 aaKnown RBP26.53■■□□□ 1.84
SRRM3-205ENST00000612155 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.53■■□□□ 1.84
SRRM3-205ENST00000612155 NINLQ9Y2I6 1382 aa26.53■■□□□ 1.84
SRRM3-205ENST00000612155 CPSF1Q10570 1443 aaKnown RBP26.52■■□□□ 1.84
SRRM3-205ENST00000612155 NSD3Q9BZ95 1437 aa26.52■■□□□ 1.84
SRRM3-205ENST00000612155 POLR3AO14802 1390 aaPredicted RBP26.5■■□□□ 1.83
SRRM3-205ENST00000612155 PSME1Q06323 249 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms