RNA–Protein interactions for RNA: ENST00000611969.4

LINC00116-203, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LINC00116, Length 441 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-203ENST00000611969 BRWD3Q6RI45 1802 aa21.15■□□□□ 0.98
LINC00116-203ENST00000611969 PRAG1Q86YV5 1406 aa21.14■□□□□ 0.98
LINC00116-203ENST00000611969 PXDNQ92626 1479 aa21.13■□□□□ 0.97
LINC00116-203ENST00000611969 CDC42BPGQ6DT37 1551 aa21.13■□□□□ 0.97
LINC00116-203ENST00000611969 GLI3P10071 1580 aa21.12■□□□□ 0.97
LINC00116-203ENST00000611969 PPLO60437 1756 aa21.12■□□□□ 0.97
LINC00116-203ENST00000611969 ITGAEP38570 1179 aa21.1■□□□□ 0.97
LINC00116-203ENST00000611969 LRP5O75197 1615 aa21.07■□□□□ 0.96
LINC00116-203ENST00000611969 HFM1A2PYH4 1435 aa21.05■□□□□ 0.96
LINC00116-203ENST00000611969 FOXD1Q16676 465 aa21.05■□□□□ 0.96
LINC00116-203ENST00000611969 RALGAPBQ86X10 1494 aa21.05■□□□□ 0.96
LINC00116-203ENST00000611969 USP32Q8NFA0 1604 aa21.04■□□□□ 0.96
LINC00116-203ENST00000611969 XPCQ01831 940 aaPredicted RBP21.04■□□□□ 0.96
LINC00116-203ENST00000611969 CCDC125Q86Z20 511 aa21.04■□□□□ 0.96
LINC00116-203ENST00000611969 GJD4Q96KN9 370 aaPredicted RBP21.03■□□□□ 0.96
LINC00116-203ENST00000611969 BLMP54132 1417 aaPredicted RBP21.03■□□□□ 0.96
LINC00116-203ENST00000611969 NPHP3Q7Z494 1330 aa21.03■□□□□ 0.96
LINC00116-203ENST00000611969 PLCH1Q4KWH8 1693 aa21.02■□□□□ 0.96
LINC00116-203ENST00000611969 FMN2Q9NZ56 1722 aa21.01■□□□□ 0.95
LINC00116-203ENST00000611969 SLIT2O94813 1529 aa21.01■□□□□ 0.95
LINC00116-203ENST00000611969 ABCA3Q99758 1704 aa21.01■□□□□ 0.95
LINC00116-203ENST00000611969 ESCO1Q5FWF5 840 aa21■□□□□ 0.95
LINC00116-203ENST00000611969 NAIPQ13075 1403 aa20.99■□□□□ 0.95
LINC00116-203ENST00000611969 KIF1AQ12756 1690 aa20.99■□□□□ 0.95
LINC00116-203ENST00000611969 KNDC1Q76NI1 1749 aa20.98■□□□□ 0.95
LINC00116-203ENST00000611969 FOXO3O43524 673 aa20.98■□□□□ 0.95
LINC00116-203ENST00000611969 DEFB132Q7Z7B7 95 aa20.98■□□□□ 0.95
LINC00116-203ENST00000611969 RGPD8O14715 1765 aaPredicted RBP20.97■□□□□ 0.95
LINC00116-203ENST00000611969 IFT172Q9UG01 1749 aa20.96■□□□□ 0.95
LINC00116-203ENST00000611969 VGFO15240 615 aaPredicted RBP20.96■□□□□ 0.95
LINC00116-203ENST00000611969 NWD2Q9ULI1 1742 aa20.95■□□□□ 0.94
LINC00116-203ENST00000611969 NUTM2FA1L443 756 aa20.94■□□□□ 0.94
LINC00116-203ENST00000611969 UNC5CLQ8IV45 518 aa20.94■□□□□ 0.94
LINC00116-203ENST00000611969 TECPR2O15040 1411 aa20.92■□□□□ 0.94
LINC00116-203ENST00000611969 NRAPQ86VF7 1730 aa20.9■□□□□ 0.94
LINC00116-203ENST00000611969 LRPPRCP42704 1394 aaKnown RBP20.9■□□□□ 0.94
LINC00116-203ENST00000611969 PLEKHH1Q9ULM0 1364 aa20.9■□□□□ 0.94
LINC00116-203ENST00000611969 SPATA31A3Q5VYP0 1347 aa20.9■□□□□ 0.94
LINC00116-203ENST00000611969 CCDC144AA2RUR9 1427 aa20.89■□□□□ 0.94
LINC00116-203ENST00000611969 RPGRIP1LQ68CZ1 1315 aa20.89■□□□□ 0.93
LINC00116-203ENST00000611969 WAPLQ7Z5K2 1190 aa20.88■□□□□ 0.93
LINC00116-203ENST00000611969 PPARGC1BQ86YN6 1023 aaKnown RBP20.88■□□□□ 0.93
LINC00116-203ENST00000611969 RRBP1Q9P2E9 1410 aaKnown RBP20.87■□□□□ 0.93
LINC00116-203ENST00000611969 SEPT12Q8IYM1 358 aa20.87■□□□□ 0.93
LINC00116-203ENST00000611969 STK26Q9P289 416 aa20.86■□□□□ 0.93
LINC00116-203ENST00000611969 TNS3Q68CZ2 1445 aa20.86■□□□□ 0.93
LINC00116-203ENST00000611969 ADGRF5Q8IZF2 1346 aa20.85■□□□□ 0.93
LINC00116-203ENST00000611969 PSDA5PKW4 1024 aaPredicted RBP20.85■□□□□ 0.93
LINC00116-203ENST00000611969 RGPD1P0DJD0 1748 aa20.84■□□□□ 0.93
LINC00116-203ENST00000611969 SF3B2Q13435 895 aaKnown RBP20.84■□□□□ 0.93
LINC00116-203ENST00000611969 VPS72Q15906 364 aa20.83■□□□□ 0.93
LINC00116-203ENST00000611969 CABLES1Q8TDN4 633 aa20.83■□□□□ 0.93
LINC00116-203ENST00000611969 TNS1Q9HBL0 1735 aaKnown RBP20.83■□□□□ 0.92
LINC00116-203ENST00000611969 PLEKHG5O94827 1062 aa20.82■□□□□ 0.92
LINC00116-203ENST00000611969 KRT28Q7Z3Y7 464 aa20.8■□□□□ 0.92
LINC00116-203ENST00000611969 KRT27Q7Z3Y8 459 aa20.8■□□□□ 0.92
LINC00116-203ENST00000611969 PIK3C2GO75747 1445 aa20.79■□□□□ 0.92
LINC00116-203ENST00000611969 TRPM3Q9HCF6 1732 aaPredicted RBP20.79■□□□□ 0.92
LINC00116-203ENST00000611969 ABCC11Q96J66 1382 aa20.79■□□□□ 0.92
LINC00116-203ENST00000611969 SPATA31E1Q6ZUB1 1445 aa20.78■□□□□ 0.92
LINC00116-203ENST00000611969 NRXN1Q9ULB1 1477 aa20.78■□□□□ 0.92
LINC00116-203ENST00000611969 ONECUT3O60422 494 aaPredicted RBP20.78■□□□□ 0.92
LINC00116-203ENST00000611969 HRCP23327 699 aa20.78■□□□□ 0.92
LINC00116-203ENST00000611969 HAP1P54257 671 aaPredicted RBP20.78■□□□□ 0.92
LINC00116-203ENST00000611969 TMEM132EQ6IEE7 984 aa20.78■□□□□ 0.92
LINC00116-203ENST00000611969 CCDC9Q9Y3X0 531 aaKnown RBP20.78■□□□□ 0.92
LINC00116-203ENST00000611969 YTHDC2Q9H6S0 1430 aaKnown RBP20.78■□□□□ 0.92
LINC00116-203ENST00000611969 SLC4A1APQ9BWU0 796 aaKnown RBP20.77■□□□□ 0.92
LINC00116-203ENST00000611969 CRYBG1Q9Y4K1 1723 aa20.76■□□□□ 0.91
LINC00116-203ENST00000611969 THSD7AQ9UPZ6 1657 aa20.76■□□□□ 0.91
LINC00116-203ENST00000611969 COL14A1Q05707 1796 aaKnown RBP20.75■□□□□ 0.91
LINC00116-203ENST00000611969 ALS2Q96Q42 1657 aa20.75■□□□□ 0.91
LINC00116-203ENST00000611969 BAG6P46379 1132 aa20.74■□□□□ 0.91
LINC00116-203ENST00000611969 SBNO1A3KN83 1393 aa20.73■□□□□ 0.91
LINC00116-203ENST00000611969 A0A0G2JS52 829 aa20.73■□□□□ 0.91
LINC00116-203ENST00000611969 MYT1Q01538 1121 aa20.73■□□□□ 0.91
LINC00116-203ENST00000611969 PHF8Q9UPP1 1060 aa20.73■□□□□ 0.91
LINC00116-203ENST00000611969 RGL3Q3MIN7 710 aa20.72■□□□□ 0.91
LINC00116-203ENST00000611969 ADGRB2O60241 1585 aa20.72■□□□□ 0.91
LINC00116-203ENST00000611969 ARHGEF10O15013 1369 aa20.72■□□□□ 0.91
LINC00116-203ENST00000611969 ANKRD30BQ9BXX2 1392 aa20.72■□□□□ 0.91
LINC00116-203ENST00000611969 FAM83GA6ND36 823 aa20.71■□□□□ 0.91
LINC00116-203ENST00000611969 FAM98CQ17RN3 349 aaKnown RBP20.71■□□□□ 0.91
LINC00116-203ENST00000611969 EN1Q05925 392 aaPredicted RBP20.7■□□□□ 0.9
LINC00116-203ENST00000611969 FAM182BQ5T319 152 aa20.7■□□□□ 0.9
LINC00116-203ENST00000611969 LMOD2Q6P5Q4 547 aa20.7■□□□□ 0.9
LINC00116-203ENST00000611969 PSME1Q06323 249 aa20.69■□□□□ 0.9
LINC00116-203ENST00000611969 R3HDM1Q15032 1099 aaKnown RBP20.68■□□□□ 0.9
LINC00116-203ENST00000611969 DISP2A7MBM2 1401 aa20.68■□□□□ 0.9
LINC00116-203ENST00000611969 RREB1Q92766 1687 aa20.67■□□□□ 0.9
LINC00116-203ENST00000611969 NUP188Q5SRE5 1749 aa20.65■□□□□ 0.9
LINC00116-203ENST00000611969 BTG4Q9NY30 223 aa20.65■□□□□ 0.9
LINC00116-203ENST00000611969 ANKARQ7Z5J8 1434 aa20.64■□□□□ 0.89
LINC00116-203ENST00000611969 SAFB2Q14151 953 aaKnown RBP eCLIP20.64■□□□□ 0.89
LINC00116-203ENST00000611969 PMFBP1Q8TBY8 1022 aa20.63■□□□□ 0.89
LINC00116-203ENST00000611969 SIRT1Q96EB6 747 aa20.62■□□□□ 0.89
LINC00116-203ENST00000611969 PHRF1Q9P1Y6 1649 aaKnown RBP20.62■□□□□ 0.89
LINC00116-203ENST00000611969 DLC1Q96QB1 1528 aa20.62■□□□□ 0.89
LINC00116-203ENST00000611969 SPATA31A5Q5VU36 1347 aa20.61■□□□□ 0.89
LINC00116-203ENST00000611969 SPATA31A7Q8IWB4 1347 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms