RNA–Protein interactions for RNA: ENST00000611947.1

U3.50-201, humanhuman

BASIC

Gene U3, Length 228 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U3.50-201ENST00000611947 PNPLA6Q8IY17 1366 aa13.55□□□□□ -0.24
U3.50-201ENST00000611947 TECPR2O15040 1411 aa13.55□□□□□ -0.24
U3.50-201ENST00000611947 IFT172Q9UG01 1749 aa13.54□□□□□ -0.24
U3.50-201ENST00000611947 WAPLQ7Z5K2 1190 aa13.54□□□□□ -0.24
U3.50-201ENST00000611947 SIRT1Q96EB6 747 aa13.54□□□□□ -0.24
U3.50-201ENST00000611947 C8orf37Q96NL8 207 aa13.54□□□□□ -0.24
U3.50-201ENST00000611947 C14orf93Q9H972 538 aaKnown RBP13.54□□□□□ -0.24
U3.50-201ENST00000611947 AFF2P51816 1311 aa13.54□□□□□ -0.24
U3.50-201ENST00000611947 RAB3GAP2Q9H2M9 1393 aa13.54□□□□□ -0.24
U3.50-201ENST00000611947 PIK3C2GO75747 1445 aa13.54□□□□□ -0.24
U3.50-201ENST00000611947 LAMC1P11047 1609 aa13.53□□□□□ -0.24
U3.50-201ENST00000611947 NGLY1Q96IV0 654 aa13.53□□□□□ -0.24
U3.50-201ENST00000611947 DHX57Q6P158 1386 aaKnown RBP13.53□□□□□ -0.24
U3.50-201ENST00000611947 CDC42BPGQ6DT37 1551 aa13.53□□□□□ -0.24
U3.50-201ENST00000611947 ADAMTS2O95450 1211 aa13.52□□□□□ -0.25
U3.50-201ENST00000611947 HRCP23327 699 aa13.52□□□□□ -0.25
U3.50-201ENST00000611947 YTHDC2Q9H6S0 1430 aaKnown RBP13.52□□□□□ -0.25
U3.50-201ENST00000611947 QTRT2Q9H974 415 aaKnown RBP13.51□□□□□ -0.25
U3.50-201ENST00000611947 FOXO3O43524 673 aa13.5□□□□□ -0.25
U3.50-201ENST00000611947 RBM6P78332 1123 aaKnown RBP13.5□□□□□ -0.25
U3.50-201ENST00000611947 CFAP70Q5T0N1 1121 aa13.5□□□□□ -0.25
U3.50-201ENST00000611947 STAC3Q96MF2 364 aa13.5□□□□□ -0.25
U3.50-201ENST00000611947 KNDC1Q76NI1 1749 aa13.5□□□□□ -0.25
U3.50-201ENST00000611947 MYOM2P54296 1465 aa13.49□□□□□ -0.25
U3.50-201ENST00000611947 CDK12Q9NYV4 1490 aaPredicted RBP13.49□□□□□ -0.25
U3.50-201ENST00000611947 NUTM2FA1L443 756 aa13.49□□□□□ -0.25
U3.50-201ENST00000611947 POGKQ9P215 609 aa13.48□□□□□ -0.25
U3.50-201ENST00000611947 NRXN1Q9ULB1 1477 aa13.48□□□□□ -0.25
U3.50-201ENST00000611947 PLEKHH1Q9ULM0 1364 aa13.47□□□□□ -0.25
U3.50-201ENST00000611947 USP21Q9UK80 565 aa13.47□□□□□ -0.25
U3.50-201ENST00000611947 PSME1Q06323 249 aa13.46□□□□□ -0.25
U3.50-201ENST00000611947 PRAM1Q96QH2 718 aa13.46□□□□□ -0.25
U3.50-201ENST00000611947 TRPC5Q9UL62 973 aaPredicted RBP13.46□□□□□ -0.25
U3.50-201ENST00000611947 XPCQ01831 940 aaPredicted RBP13.45□□□□□ -0.26
U3.50-201ENST00000611947 FNBP4Q8N3X1 1017 aaPredicted RBP13.45□□□□□ -0.26
U3.50-201ENST00000611947 DCAF11Q8TEB1 546 aa13.45□□□□□ -0.26
U3.50-201ENST00000611947 UPF1Q92900 1129 aaKnown RBP eCLIP13.45□□□□□ -0.26
U3.50-201ENST00000611947 KDM2AQ9Y2K7 1162 aa13.45□□□□□ -0.26
U3.50-201ENST00000611947 PXDNQ92626 1479 aa13.44□□□□□ -0.26
U3.50-201ENST00000611947 COL22A1Q8NFW1 1626 aaPredicted RBP13.44□□□□□ -0.26
U3.50-201ENST00000611947 KRT28Q7Z3Y7 464 aa13.44□□□□□ -0.26
U3.50-201ENST00000611947 PHF8Q9UPP1 1060 aa13.44□□□□□ -0.26
U3.50-201ENST00000611947 SAFB2Q14151 953 aaKnown RBP eCLIP13.43□□□□□ -0.26
U3.50-201ENST00000611947 FMN2Q9NZ56 1722 aa13.43□□□□□ -0.26
U3.50-201ENST00000611947 KIF1AQ12756 1690 aa13.43□□□□□ -0.26
U3.50-201ENST00000611947 SPATA31A3Q5VYP0 1347 aa13.41□□□□□ -0.26
U3.50-201ENST00000611947 DLC1Q96QB1 1528 aa13.41□□□□□ -0.26
U3.50-201ENST00000611947 HAP1P54257 671 aaPredicted RBP13.41□□□□□ -0.26
U3.50-201ENST00000611947 TRAK1Q9UPV9 953 aa13.41□□□□□ -0.26
U3.50-201ENST00000611947 EIF3AQ14152 1382 aaKnown RBP13.41□□□□□ -0.26
U3.50-201ENST00000611947 RGS12O14924 1447 aa13.39□□□□□ -0.27
U3.50-201ENST00000611947 ANKARQ7Z5J8 1434 aa13.39□□□□□ -0.27
U3.50-201ENST00000611947 LMOD2Q6P5Q4 547 aa13.38□□□□□ -0.27
U3.50-201ENST00000611947 RGPD8O14715 1765 aaPredicted RBP13.37□□□□□ -0.27
U3.50-201ENST00000611947 SBNO1A3KN83 1393 aa13.37□□□□□ -0.27
U3.50-201ENST00000611947 ARHGEF10O15013 1369 aa13.37□□□□□ -0.27
U3.50-201ENST00000611947 ATAD2Q6PL18 1390 aa13.37□□□□□ -0.27
U3.50-201ENST00000611947 MARF1Q9Y4F3 1742 aaKnown RBP13.37□□□□□ -0.27
U3.50-201ENST00000611947 ATRNO75882 1429 aa13.37□□□□□ -0.27
U3.50-201ENST00000611947 MINK1Q8N4C8 1332 aaPredicted RBP13.37□□□□□ -0.27
U3.50-201ENST00000611947 ADGRB1O14514 1584 aa13.37□□□□□ -0.27
U3.50-201ENST00000611947 GPRASP1Q5JY77 1395 aa13.36□□□□□ -0.27
U3.50-201ENST00000611947 UNC5CLQ8IV45 518 aa13.36□□□□□ -0.27
U3.50-201ENST00000611947 PMFBP1Q8TBY8 1022 aa13.36□□□□□ -0.27
U3.50-201ENST00000611947 GJD4Q96KN9 370 aaPredicted RBP13.36□□□□□ -0.27
U3.50-201ENST00000611947 HIRIP3Q9BW71 556 aaPredicted RBP13.36□□□□□ -0.27
U3.50-201ENST00000611947 TNS3Q68CZ2 1445 aa13.36□□□□□ -0.27
U3.50-201ENST00000611947 BCL9LQ86UU0 1499 aa13.36□□□□□ -0.27
U3.50-201ENST00000611947 WASLO00401 505 aaPredicted RBP13.35□□□□□ -0.27
U3.50-201ENST00000611947 ADGRB2O60241 1585 aa13.34□□□□□ -0.27
U3.50-201ENST00000611947 NGDNQ8NEJ9 315 aaKnown RBP13.33□□□□□ -0.28
U3.50-201ENST00000611947 PLEKHG5O94827 1062 aa13.32□□□□□ -0.28
U3.50-201ENST00000611947 CCDC125Q86Z20 511 aa13.32□□□□□ -0.28
U3.50-201ENST00000611947 CABLES1Q8TDN4 633 aa13.32□□□□□ -0.28
U3.50-201ENST00000611947 SLIT2O94813 1529 aa13.31□□□□□ -0.28
U3.50-201ENST00000611947 TULP4Q9NRJ4 1543 aa13.31□□□□□ -0.28
U3.50-201ENST00000611947 USP32Q8NFA0 1604 aa13.31□□□□□ -0.28
U3.50-201ENST00000611947 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.3□□□□□ -0.28
U3.50-201ENST00000611947 CCDC9Q9Y3X0 531 aaKnown RBP13.3□□□□□ -0.28
U3.50-201ENST00000611947 PAK3O75914 559 aaPredicted RBP13.29□□□□□ -0.28
U3.50-201ENST00000611947 VPS72Q15906 364 aa13.29□□□□□ -0.28
U3.50-201ENST00000611947 NUDT16Q96DE0 195 aaKnown RBP13.29□□□□□ -0.28
U3.50-201ENST00000611947 PRR36Q9H6K5 1346 aa13.29□□□□□ -0.28
U3.50-201ENST00000611947 FAM83GA6ND36 823 aa13.28□□□□□ -0.28
U3.50-201ENST00000611947 CDK19Q9BWU1 502 aa13.28□□□□□ -0.28
U3.50-201ENST00000611947 RALGAPBQ86X10 1494 aa13.28□□□□□ -0.28
U3.50-201ENST00000611947 KIAA1210Q9ULL0 1709 aa13.27□□□□□ -0.28
U3.50-201ENST00000611947 CCDC61Q9Y6R9 512 aa13.27□□□□□ -0.29
U3.50-201ENST00000611947 ARHGEF28Q8N1W1 1705 aaKnown RBP13.27□□□□□ -0.29
U3.50-201ENST00000611947 ITSN1Q15811 1721 aa13.26□□□□□ -0.29
U3.50-201ENST00000611947 NWD2Q9ULI1 1742 aa13.26□□□□□ -0.29
U3.50-201ENST00000611947 ONECUT3O60422 494 aaPredicted RBP13.25□□□□□ -0.29
U3.50-201ENST00000611947 SEPT12Q8IYM1 358 aa13.25□□□□□ -0.29
U3.50-201ENST00000611947 BTG4Q9NY30 223 aa13.25□□□□□ -0.29
U3.50-201ENST00000611947 TRPM3Q9HCF6 1732 aaPredicted RBP13.25□□□□□ -0.29
U3.50-201ENST00000611947 SF3B2Q13435 895 aaKnown RBP13.24□□□□□ -0.29
U3.50-201ENST00000611947 NBPF1Q3BBV0 1214 aa13.24□□□□□ -0.29
U3.50-201ENST00000611947 GLI3P10071 1580 aa13.24□□□□□ -0.29
U3.50-201ENST00000611947 ABCA3Q99758 1704 aa13.23□□□□□ -0.29
U3.50-201ENST00000611947 A0A0G2JS52 829 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms