RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 WAPLQ7Z5K2 1190 aa32.04■■■□□ 2.72
CBWD3-207ENST00000611426 PNPLA6Q8IY17 1366 aa32.01■■■□□ 2.72
CBWD3-207ENST00000611426 ABCC11Q96J66 1382 aa32.01■■■□□ 2.72
CBWD3-207ENST00000611426 TECPR2O15040 1411 aa32.01■■■□□ 2.71
CBWD3-207ENST00000611426 LAMC1P11047 1609 aa31.98■■■□□ 2.71
CBWD3-207ENST00000611426 ESCO1Q5FWF5 840 aa31.98■■■□□ 2.71
CBWD3-207ENST00000611426 SOS2Q07890 1332 aaPredicted RBP31.98■■■□□ 2.71
CBWD3-207ENST00000611426 CDC42BPGQ6DT37 1551 aa31.98■■■□□ 2.71
CBWD3-207ENST00000611426 C14orf93Q9H972 538 aaKnown RBP31.97■■■□□ 2.71
CBWD3-207ENST00000611426 YTHDC2Q9H6S0 1430 aaKnown RBP31.96■■■□□ 2.71
CBWD3-207ENST00000611426 AFF2P51816 1311 aa31.94■■■□□ 2.7
CBWD3-207ENST00000611426 KNDC1Q76NI1 1749 aa31.94■■■□□ 2.7
CBWD3-207ENST00000611426 CFAP70Q5T0N1 1121 aa31.94■■■□□ 2.7
CBWD3-207ENST00000611426 C8orf37Q96NL8 207 aa31.94■■■□□ 2.7
CBWD3-207ENST00000611426 PLEKHH1Q9ULM0 1364 aa31.93■■■□□ 2.7
CBWD3-207ENST00000611426 MYOM2P54296 1465 aa31.92■■■□□ 2.7
CBWD3-207ENST00000611426 NUTM2FA1L443 756 aa31.92■■■□□ 2.7
CBWD3-207ENST00000611426 RXRBP28702 533 aa31.92■■■□□ 2.7
CBWD3-207ENST00000611426 NRXN1Q9ULB1 1477 aa31.91■■■□□ 2.7
CBWD3-207ENST00000611426 DHX57Q6P158 1386 aaKnown RBP31.9■■■□□ 2.7
CBWD3-207ENST00000611426 NPHP3Q7Z494 1330 aa31.9■■■□□ 2.7
CBWD3-207ENST00000611426 SIRT1Q96EB6 747 aa31.9■■■□□ 2.7
CBWD3-207ENST00000611426 ADAMTS2O95450 1211 aa31.89■■■□□ 2.7
CBWD3-207ENST00000611426 HRCP23327 699 aa31.88■■■□□ 2.69
CBWD3-207ENST00000611426 FOXO3O43524 673 aa31.87■■■□□ 2.69
CBWD3-207ENST00000611426 NGLY1Q96IV0 654 aa31.85■■■□□ 2.69
CBWD3-207ENST00000611426 XPCQ01831 940 aaPredicted RBP31.82■■■□□ 2.69
CBWD3-207ENST00000611426 QTRT2Q9H974 415 aaKnown RBP31.82■■■□□ 2.69
CBWD3-207ENST00000611426 KDM2AQ9Y2K7 1162 aa31.81■■■□□ 2.68
CBWD3-207ENST00000611426 PXDNQ92626 1479 aa31.81■■■□□ 2.68
CBWD3-207ENST00000611426 FMN2Q9NZ56 1722 aa31.8■■■□□ 2.68
CBWD3-207ENST00000611426 PRAM1Q96QH2 718 aa31.8■■■□□ 2.68
CBWD3-207ENST00000611426 SAFB2Q14151 953 aaKnown RBP eCLIP31.79■■■□□ 2.68
CBWD3-207ENST00000611426 DCAF11Q8TEB1 546 aa31.79■■■□□ 2.68
CBWD3-207ENST00000611426 COL22A1Q8NFW1 1626 aaPredicted RBP31.77■■■□□ 2.68
CBWD3-207ENST00000611426 POGKQ9P215 609 aa31.77■■■□□ 2.68
CBWD3-207ENST00000611426 CDK12Q9NYV4 1490 aaPredicted RBP31.77■■■□□ 2.68
CBWD3-207ENST00000611426 RBM6P78332 1123 aaKnown RBP31.76■■■□□ 2.67
CBWD3-207ENST00000611426 USP21Q9UK80 565 aa31.73■■■□□ 2.67
CBWD3-207ENST00000611426 STAC3Q96MF2 364 aa31.72■■■□□ 2.67
CBWD3-207ENST00000611426 KIF1AQ12756 1690 aa31.71■■■□□ 2.67
CBWD3-207ENST00000611426 TRAK1Q9UPV9 953 aa31.71■■■□□ 2.67
CBWD3-207ENST00000611426 DLC1Q96QB1 1528 aa31.71■■■□□ 2.67
CBWD3-207ENST00000611426 KRT28Q7Z3Y7 464 aa31.7■■■□□ 2.67
CBWD3-207ENST00000611426 FNBP4Q8N3X1 1017 aaPredicted RBP31.7■■■□□ 2.67
CBWD3-207ENST00000611426 PHF8Q9UPP1 1060 aa31.7■■■□□ 2.67
CBWD3-207ENST00000611426 UPF1Q92900 1129 aaKnown RBP eCLIP31.69■■■□□ 2.66
CBWD3-207ENST00000611426 ADGRB1O14514 1584 aa31.69■■■□□ 2.66
CBWD3-207ENST00000611426 RGPD8O14715 1765 aaPredicted RBP31.69■■■□□ 2.66
CBWD3-207ENST00000611426 SPATA31A3Q5VYP0 1347 aa31.67■■■□□ 2.66
CBWD3-207ENST00000611426 TRPC5Q9UL62 973 aaPredicted RBP31.67■■■□□ 2.66
CBWD3-207ENST00000611426 PSME1Q06323 249 aa31.65■■■□□ 2.66
CBWD3-207ENST00000611426 RGS12O14924 1447 aa31.64■■■□□ 2.66
CBWD3-207ENST00000611426 HIRIP3Q9BW71 556 aaPredicted RBP31.62■■■□□ 2.65
CBWD3-207ENST00000611426 MINK1Q8N4C8 1332 aaPredicted RBP31.6■■■□□ 2.65
CBWD3-207ENST00000611426 MARF1Q9Y4F3 1742 aaKnown RBP31.6■■■□□ 2.65
CBWD3-207ENST00000611426 ANKARQ7Z5J8 1434 aa31.59■■■□□ 2.65
CBWD3-207ENST00000611426 PMFBP1Q8TBY8 1022 aa31.58■■■□□ 2.65
CBWD3-207ENST00000611426 ADGRB2O60241 1585 aa31.58■■■□□ 2.65
CBWD3-207ENST00000611426 ATRNO75882 1429 aa31.57■■■□□ 2.64
CBWD3-207ENST00000611426 TNS3Q68CZ2 1445 aa31.56■■■□□ 2.64
CBWD3-207ENST00000611426 BCL9LQ86UU0 1499 aa31.56■■■□□ 2.64
CBWD3-207ENST00000611426 USP32Q8NFA0 1604 aa31.55■■■□□ 2.64
CBWD3-207ENST00000611426 HAP1P54257 671 aaPredicted RBP31.55■■■□□ 2.64
CBWD3-207ENST00000611426 LMOD2Q6P5Q4 547 aa31.55■■■□□ 2.64
CBWD3-207ENST00000611426 SBNO1A3KN83 1393 aa31.54■■■□□ 2.64
CBWD3-207ENST00000611426 EIF3AQ14152 1382 aaKnown RBP31.53■■■□□ 2.64
CBWD3-207ENST00000611426 WASLO00401 505 aaPredicted RBP31.53■■■□□ 2.64
CBWD3-207ENST00000611426 PLEKHG5O94827 1062 aa31.53■■■□□ 2.64
CBWD3-207ENST00000611426 CABLES1Q8TDN4 633 aa31.51■■■□□ 2.63
CBWD3-207ENST00000611426 PRR36Q9H6K5 1346 aa31.49■■■□□ 2.63
CBWD3-207ENST00000611426 ARHGEF10O15013 1369 aa31.49■■■□□ 2.63
CBWD3-207ENST00000611426 UNC5CLQ8IV45 518 aa31.48■■■□□ 2.63
CBWD3-207ENST00000611426 GJD4Q96KN9 370 aaPredicted RBP31.48■■■□□ 2.63
CBWD3-207ENST00000611426 TULP4Q9NRJ4 1543 aa31.47■■■□□ 2.63
CBWD3-207ENST00000611426 GPRASP1Q5JY77 1395 aa31.45■■■□□ 2.63
CBWD3-207ENST00000611426 SLIT2O94813 1529 aa31.45■■■□□ 2.63
CBWD3-207ENST00000611426 ARHGEF28Q8N1W1 1705 aaKnown RBP31.45■■■□□ 2.63
CBWD3-207ENST00000611426 ATAD2Q6PL18 1390 aa31.44■■■□□ 2.62
CBWD3-207ENST00000611426 NGDNQ8NEJ9 315 aaKnown RBP31.43■■■□□ 2.62
CBWD3-207ENST00000611426 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.42■■■□□ 2.62
CBWD3-207ENST00000611426 KIAA1210Q9ULL0 1709 aa31.4■■■□□ 2.62
CBWD3-207ENST00000611426 NUDT16Q96DE0 195 aaKnown RBP31.39■■■□□ 2.62
CBWD3-207ENST00000611426 NBPF1Q3BBV0 1214 aa31.38■■■□□ 2.61
CBWD3-207ENST00000611426 TRPM3Q9HCF6 1732 aaPredicted RBP31.38■■■□□ 2.61
CBWD3-207ENST00000611426 CDK19Q9BWU1 502 aa31.37■■■□□ 2.61
CBWD3-207ENST00000611426 ABCA3Q99758 1704 aa31.36■■■□□ 2.61
CBWD3-207ENST00000611426 PAK3O75914 559 aaPredicted RBP31.36■■■□□ 2.61
CBWD3-207ENST00000611426 RALGAPBQ86X10 1494 aa31.36■■■□□ 2.61
CBWD3-207ENST00000611426 FAM83GA6ND36 823 aa31.34■■■□□ 2.61
CBWD3-207ENST00000611426 ALS2Q96Q42 1657 aa31.32■■■□□ 2.61
CBWD3-207ENST00000611426 GLI3P10071 1580 aa31.32■■■□□ 2.61
CBWD3-207ENST00000611426 ATP7BP35670 1465 aa31.32■■■□□ 2.61
CBWD3-207ENST00000611426 VPS72Q15906 364 aa31.32■■■□□ 2.6
CBWD3-207ENST00000611426 ITSN1Q15811 1721 aa31.32■■■□□ 2.6
CBWD3-207ENST00000611426 PLCH1Q4KWH8 1693 aa31.32■■■□□ 2.6
CBWD3-207ENST00000611426 CCDC9Q9Y3X0 531 aaKnown RBP31.31■■■□□ 2.6
CBWD3-207ENST00000611426 NWD2Q9ULI1 1742 aa31.31■■■□□ 2.6
CBWD3-207ENST00000611426 EP400Q96L91 3159 aa31.29■■■□□ 2.6
CBWD3-207ENST00000611426 L3MBTL2Q969R5 705 aa31.29■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms