RNA–Protein interactions for RNA: ENST00000611412.4

VPS45-212, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 5 BASIC

Gene VPS45, Length 2,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-212ENST00000611412 NWD1Q149M9 1564 aa16.65■□□□□ 0.26
VPS45-212ENST00000611412 TMF1P82094 1093 aa16.65■□□□□ 0.26
VPS45-212ENST00000611412 SIRT1Q96EB6 747 aa16.65■□□□□ 0.26
VPS45-212ENST00000611412 KIF7Q2M1P5 1343 aa16.65■□□□□ 0.26
VPS45-212ENST00000611412 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.64■□□□□ 0.25
VPS45-212ENST00000611412 PROSER2Q86WR7 435 aaPredicted RBP16.64■□□□□ 0.25
VPS45-212ENST00000611412 CCDC7Q96M83 1385 aa16.63■□□□□ 0.25
VPS45-212ENST00000611412 TULP4Q9NRJ4 1543 aa16.62■□□□□ 0.25
VPS45-212ENST00000611412 SBNO2Q9Y2G9 1366 aa16.62■□□□□ 0.25
VPS45-212ENST00000611412 CABP2Q9NPB3 220 aa16.61■□□□□ 0.25
VPS45-212ENST00000611412 C14orf37Q86TY3 774 aa16.61■□□□□ 0.25
VPS45-212ENST00000611412 EVC2Q86UK5 1308 aa16.6■□□□□ 0.25
VPS45-212ENST00000611412 NUTM2FA1L443 756 aa16.6■□□□□ 0.25
VPS45-212ENST00000611412 SRPK2P78362 688 aaKnown RBP16.6■□□□□ 0.25
VPS45-212ENST00000611412 CDK19Q9BWU1 502 aa16.6■□□□□ 0.25
VPS45-212ENST00000611412 NKTRP30414 1462 aaKnown RBP16.59■□□□□ 0.25
VPS45-212ENST00000611412 DDX10Q13206 875 aaKnown RBP16.59■□□□□ 0.25
VPS45-212ENST00000611412 TMEM94Q12767 1356 aa16.58■□□□□ 0.24
VPS45-212ENST00000611412 WASLO00401 505 aaPredicted RBP16.58■□□□□ 0.24
VPS45-212ENST00000611412 NALCNQ8IZF0 1738 aa16.58■□□□□ 0.24
VPS45-212ENST00000611412 SLC24A1O60721 1099 aa16.55■□□□□ 0.24
VPS45-212ENST00000611412 CDCA8Q53HL2 280 aa16.55■□□□□ 0.24
VPS45-212ENST00000611412 LRRC7Q96NW7 1537 aa16.55■□□□□ 0.24
VPS45-212ENST00000611412 TMC1Q8TDI8 760 aa16.54■□□□□ 0.24
VPS45-212ENST00000611412 ADGRB2O60241 1585 aa16.54■□□□□ 0.24
VPS45-212ENST00000611412 ADGRL3Q9HAR2 1447 aa16.54■□□□□ 0.24
VPS45-212ENST00000611412 XIRP1Q702N8 1843 aaKnown RBP16.52■□□□□ 0.24
VPS45-212ENST00000611412 PRR36Q9H6K5 1346 aa16.51■□□□□ 0.23
VPS45-212ENST00000611412 NUDT16Q96DE0 195 aaKnown RBP16.51■□□□□ 0.23
VPS45-212ENST00000611412 SLC12A5Q9H2X9 1139 aa16.51■□□□□ 0.23
VPS45-212ENST00000611412 MYOM1P52179 1685 aa16.5■□□□□ 0.23
VPS45-212ENST00000611412 C19orf44Q9H6X5 657 aa16.5■□□□□ 0.23
VPS45-212ENST00000611412 LTBP4Q8N2S1 1624 aa16.5■□□□□ 0.23
VPS45-212ENST00000611412 CDC42BPGQ6DT37 1551 aa16.49■□□□□ 0.23
VPS45-212ENST00000611412 ATP7BP35670 1465 aa16.49■□□□□ 0.23
VPS45-212ENST00000611412 CABP1Q9NZU7 370 aa16.49■□□□□ 0.23
VPS45-212ENST00000611412 FMN2Q9NZ56 1722 aa16.48■□□□□ 0.23
VPS45-212ENST00000611412 USP32Q8NFA0 1604 aa16.48■□□□□ 0.23
VPS45-212ENST00000611412 ATAD2Q6PL18 1390 aa16.48■□□□□ 0.23
VPS45-212ENST00000611412 PANK3Q9H999 370 aa16.47■□□□□ 0.23
VPS45-212ENST00000611412 MSH6P52701 1360 aa16.47■□□□□ 0.23
VPS45-212ENST00000611412 RGPD8O14715 1765 aaPredicted RBP16.47■□□□□ 0.23
VPS45-212ENST00000611412 ATF3P18847 181 aa16.47■□□□□ 0.23
VPS45-212ENST00000611412 CNGB1Q14028 1251 aaPredicted RBP16.47■□□□□ 0.23
VPS45-212ENST00000611412 DIEXFQ68CQ4 756 aaKnown RBP16.47■□□□□ 0.23
VPS45-212ENST00000611412 PUS7Q96PZ0 661 aaKnown RBP16.47■□□□□ 0.23
VPS45-212ENST00000611412 PPIP5K1Q6PFW1 1433 aa16.47■□□□□ 0.23
VPS45-212ENST00000611412 NCOA3Q9Y6Q9 1424 aa16.46■□□□□ 0.23
VPS45-212ENST00000611412 PMFBP1Q8TBY8 1022 aa16.46■□□□□ 0.22
VPS45-212ENST00000611412 CCDC61Q9Y6R9 512 aa16.46■□□□□ 0.22
VPS45-212ENST00000611412 ESCO1Q5FWF5 840 aa16.43■□□□□ 0.22
VPS45-212ENST00000611412 ORAI2Q96SN7 254 aa16.43■□□□□ 0.22
VPS45-212ENST00000611412 CADPS2Q86UW7 1296 aa16.42■□□□□ 0.22
VPS45-212ENST00000611412 TOPAZ1Q8N9V7 1692 aa16.42■□□□□ 0.22
VPS45-212ENST00000611412 ANKARQ7Z5J8 1434 aa16.42■□□□□ 0.22
VPS45-212ENST00000611412 A0A1W2PP64 1363 aa16.42■□□□□ 0.22
VPS45-212ENST00000611412 CD163L1Q9NR16 1453 aa16.41■□□□□ 0.22
VPS45-212ENST00000611412 CARD14Q9BXL6 1004 aa16.41■□□□□ 0.22
VPS45-212ENST00000611412 DCCP43146 1447 aa16.41■□□□□ 0.22
VPS45-212ENST00000611412 MST1RQ04912 1400 aa16.41■□□□□ 0.22
VPS45-212ENST00000611412 C1orf167Q5SNV9 1468 aa16.41■□□□□ 0.22
VPS45-212ENST00000611412 ACEP12821 1306 aa16.4■□□□□ 0.22
VPS45-212ENST00000611412 ANKRD36BQ8N2N9 1353 aa16.39■□□□□ 0.21
VPS45-212ENST00000611412 NINLQ9Y2I6 1382 aa16.39■□□□□ 0.21
VPS45-212ENST00000611412 ITSN1Q15811 1721 aa16.39■□□□□ 0.21
VPS45-212ENST00000611412 HDGFL2Q7Z4V5 671 aaPredicted RBP16.39■□□□□ 0.21
VPS45-212ENST00000611412 NGDNQ8NEJ9 315 aaKnown RBP16.39■□□□□ 0.21
VPS45-212ENST00000611412 TERF2IPQ9NYB0 399 aa16.39■□□□□ 0.21
VPS45-212ENST00000611412 PHF8Q9UPP1 1060 aa16.39■□□□□ 0.21
VPS45-212ENST00000611412 PLEKHG3A1L390 1219 aa16.38■□□□□ 0.21
VPS45-212ENST00000611412 PER1O15534 1290 aaPredicted RBP16.38■□□□□ 0.21
VPS45-212ENST00000611412 NSD3Q9BZ95 1437 aa16.38■□□□□ 0.21
VPS45-212ENST00000611412 KTN1Q86UP2 1357 aaKnown RBP16.37■□□□□ 0.21
VPS45-212ENST00000611412 SLAIN2Q9P270 581 aa16.37■□□□□ 0.21
VPS45-212ENST00000611412 KNSTRNQ9Y448 316 aa16.36■□□□□ 0.21
VPS45-212ENST00000611412 DDX17Q92841 729 aaKnown RBP16.36■□□□□ 0.21
VPS45-212ENST00000611412 CPSF1Q10570 1443 aaKnown RBP16.36■□□□□ 0.21
VPS45-212ENST00000611412 FOXO3O43524 673 aa16.35■□□□□ 0.21
VPS45-212ENST00000611412 XPCQ01831 940 aaPredicted RBP16.35■□□□□ 0.21
VPS45-212ENST00000611412 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.35■□□□□ 0.21
VPS45-212ENST00000611412 CC2D1BQ5T0F9 858 aaKnown RBP16.34■□□□□ 0.21
VPS45-212ENST00000611412 AKAP12Q02952 1782 aa16.34■□□□□ 0.21
VPS45-212ENST00000611412 BRINP3Q76B58 766 aa16.33■□□□□ 0.21
VPS45-212ENST00000611412 POLR3AO14802 1390 aaPredicted RBP16.33■□□□□ 0.2
VPS45-212ENST00000611412 CERKQ8TCT0 537 aa16.33■□□□□ 0.2
VPS45-212ENST00000611412 ZNF692Q9BU19 519 aaPredicted RBP16.32■□□□□ 0.2
VPS45-212ENST00000611412 PSME1Q06323 249 aa16.31■□□□□ 0.2
VPS45-212ENST00000611412 AMER1Q5JTC6 1135 aaPredicted RBP16.31■□□□□ 0.2
VPS45-212ENST00000611412 MON2Q7Z3U7 1717 aa16.31■□□□□ 0.2
VPS45-212ENST00000611412 USP6P35125 1406 aa16.31■□□□□ 0.2
VPS45-212ENST00000611412 ANP32CO43423 234 aa16.3■□□□□ 0.2
VPS45-212ENST00000611412 PAK3O75914 559 aaPredicted RBP16.3■□□□□ 0.2
VPS45-212ENST00000611412 PIP4K2BP78356 416 aa16.3■□□□□ 0.2
VPS45-212ENST00000611412 MIER1Q8N108 512 aa16.3■□□□□ 0.2
VPS45-212ENST00000611412 KIF1AQ12756 1690 aa16.3■□□□□ 0.2
VPS45-212ENST00000611412 EDC4Q6P2E9 1401 aaKnown RBP16.3■□□□□ 0.2
VPS45-212ENST00000611412 NME9Q86XW9 330 aa16.3■□□□□ 0.2
VPS45-212ENST00000611412 GGNBP2Q9H3C7 697 aa16.3■□□□□ 0.2
VPS45-212ENST00000611412 SCAF1Q9H7N4 1312 aaKnown RBP16.3■□□□□ 0.2
VPS45-212ENST00000611412 ZRANB1Q9UGI0 708 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms