RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 CABP2Q9NPB3 220 aa21.11■□□□□ 0.97
RTN1-209ENST00000611068 USP35Q9P2H5 1018 aa21.11■□□□□ 0.97
RTN1-209ENST00000611068 RIMS2Q9UQ26 1411 aa21.11■□□□□ 0.97
RTN1-209ENST00000611068 SPATA31D1Q6ZQQ2 1576 aa21.11■□□□□ 0.97
RTN1-209ENST00000611068 KTN1Q86UP2 1357 aaKnown RBP21.11■□□□□ 0.97
RTN1-209ENST00000611068 POGKQ9P215 609 aa21.1■□□□□ 0.97
RTN1-209ENST00000611068 WAPLQ7Z5K2 1190 aa21.09■□□□□ 0.97
RTN1-209ENST00000611068 RALBP1Q15311 655 aa21.07■□□□□ 0.96
RTN1-209ENST00000611068 MYBBP1AQ9BQG0 1328 aaKnown RBP21.07■□□□□ 0.96
RTN1-209ENST00000611068 CARD14Q9BXL6 1004 aa21.06■□□□□ 0.96
RTN1-209ENST00000611068 GLIPR1L2Q4G1C9 344 aa21.06■□□□□ 0.96
RTN1-209ENST00000611068 NPM2Q86SE8 214 aaKnown RBP21.06■□□□□ 0.96
RTN1-209ENST00000611068 SETBP1Q9Y6X0 1596 aa21.05■□□□□ 0.96
RTN1-209ENST00000611068 SRPK2P78362 688 aaKnown RBP21.04■□□□□ 0.96
RTN1-209ENST00000611068 ASXL1Q8IXJ9 1541 aa21.04■□□□□ 0.96
RTN1-209ENST00000611068 GSE1Q14687 1217 aa21.04■□□□□ 0.96
RTN1-209ENST00000611068 LTKP29376 864 aa21.03■□□□□ 0.96
RTN1-209ENST00000611068 TNNT2P45379 298 aaPredicted RBP21.03■□□□□ 0.96
RTN1-209ENST00000611068 PNISRQ8TF01 805 aaKnown RBP21.03■□□□□ 0.96
RTN1-209ENST00000611068 ZFYVE9O95405 1425 aa21.03■□□□□ 0.96
RTN1-209ENST00000611068 TXNDC2Q86VQ3 553 aa21.02■□□□□ 0.96
RTN1-209ENST00000611068 AMER1Q5JTC6 1135 aaPredicted RBP21.02■□□□□ 0.96
RTN1-209ENST00000611068 SLC26A8Q96RN1 970 aa21.02■□□□□ 0.96
RTN1-209ENST00000611068 YTHDC2Q9H6S0 1430 aaKnown RBP21.02■□□□□ 0.95
RTN1-209ENST00000611068 ALKQ9UM73 1620 aa21.01■□□□□ 0.95
RTN1-209ENST00000611068 DAXXQ9UER7 740 aaPredicted RBP21.01■□□□□ 0.95
RTN1-209ENST00000611068 QRICH2Q9H0J4 1663 aa21.01■□□□□ 0.95
RTN1-209ENST00000611068 PARD3Q8TEW0 1356 aa21.01■□□□□ 0.95
RTN1-209ENST00000611068 METP08581 1390 aa21■□□□□ 0.95
RTN1-209ENST00000611068 EVC2Q86UK5 1308 aa21■□□□□ 0.95
RTN1-209ENST00000611068 KDM5AP29375 1690 aaKnown RBP20.99■□□□□ 0.95
RTN1-209ENST00000611068 PLEKHH1Q9ULM0 1364 aa20.99■□□□□ 0.95
RTN1-209ENST00000611068 NLRP13Q86W25 1043 aa20.98■□□□□ 0.95
RTN1-209ENST00000611068 PTPRMP28827 1452 aa20.97■□□□□ 0.95
RTN1-209ENST00000611068 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.97■□□□□ 0.95
RTN1-209ENST00000611068 FRAT1Q92837 279 aaPredicted RBP20.97■□□□□ 0.95
RTN1-209ENST00000611068 MYOM1P52179 1685 aa20.97■□□□□ 0.95
RTN1-209ENST00000611068 TMEM2Q9UHN6 1383 aa20.96■□□□□ 0.95
RTN1-209ENST00000611068 ARHGEF28Q8N1W1 1705 aaKnown RBP20.96■□□□□ 0.95
RTN1-209ENST00000611068 PPP2R1AP30153 589 aa20.94■□□□□ 0.94
RTN1-209ENST00000611068 FAM43AQ8N2R8 423 aa20.94■□□□□ 0.94
RTN1-209ENST00000611068 CDK19Q9BWU1 502 aa20.94■□□□□ 0.94
RTN1-209ENST00000611068 FER1L4A9Z1Z3 1794 aa20.94■□□□□ 0.94
RTN1-209ENST00000611068 HDGFP51858 240 aaKnown RBP20.93■□□□□ 0.94
RTN1-209ENST00000611068 SBNO2Q9Y2G9 1366 aa20.93■□□□□ 0.94
RTN1-209ENST00000611068 MYO3AQ8NEV4 1616 aa20.93■□□□□ 0.94
RTN1-209ENST00000611068 C3P01024 1663 aa20.93■□□□□ 0.94
RTN1-209ENST00000611068 BRD4O60885 1362 aaPredicted RBP20.93■□□□□ 0.94
RTN1-209ENST00000611068 TULP4Q9NRJ4 1543 aa20.93■□□□□ 0.94
RTN1-209ENST00000611068 NUTM2FA1L443 756 aa20.92■□□□□ 0.94
RTN1-209ENST00000611068 PPM1GO15355 546 aaPredicted RBP20.92■□□□□ 0.94
RTN1-209ENST00000611068 NSD3Q9BZ95 1437 aa20.91■□□□□ 0.94
RTN1-209ENST00000611068 NCKAP5LQ9HCH0 1330 aa20.9■□□□□ 0.94
RTN1-209ENST00000611068 EID1Q9Y6B2 187 aa20.9■□□□□ 0.94
RTN1-209ENST00000611068 UBR1Q8IWV7 1749 aa20.89■□□□□ 0.94
RTN1-209ENST00000611068 CABP1Q9NZU7 370 aa20.89■□□□□ 0.93
RTN1-209ENST00000611068 LRPPRCP42704 1394 aaKnown RBP20.86■□□□□ 0.93
RTN1-209ENST00000611068 NRXN3Q9Y4C0 1643 aa20.86■□□□□ 0.93
RTN1-209ENST00000611068 MORC1Q86VD1 984 aa20.86■□□□□ 0.93
RTN1-209ENST00000611068 THEMISQ8N1K5 641 aaPredicted RBP20.85■□□□□ 0.93
RTN1-209ENST00000611068 ADAMTS8Q9UP79 889 aa20.85■□□□□ 0.93
RTN1-209ENST00000611068 ZBED9Q6R2W3 1325 aa20.84■□□□□ 0.93
RTN1-209ENST00000611068 RIMS1Q86UR5 1692 aaKnown RBP20.84■□□□□ 0.93
RTN1-209ENST00000611068 NLRP1Q9C000 1473 aa20.83■□□□□ 0.93
RTN1-209ENST00000611068 NFKBIBQ15653 356 aa20.83■□□□□ 0.93
RTN1-209ENST00000611068 GGNBP2Q9H3C7 697 aa20.83■□□□□ 0.93
RTN1-209ENST00000611068 RBM33Q96EV2 1170 aaKnown RBP20.83■□□□□ 0.92
RTN1-209ENST00000611068 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.82■□□□□ 0.92
RTN1-209ENST00000611068 A0A1W2PP64 1363 aa20.81■□□□□ 0.92
RTN1-209ENST00000611068 ABCC11Q96J66 1382 aa20.81■□□□□ 0.92
RTN1-209ENST00000611068 ADAMTS13Q76LX8 1427 aa20.81■□□□□ 0.92
RTN1-209ENST00000611068 CCDC146Q8IYE0 955 aa20.81■□□□□ 0.92
RTN1-209ENST00000611068 ROBO2Q9HCK4 1378 aa20.81■□□□□ 0.92
RTN1-209ENST00000611068 SETD1AO15047 1707 aaKnown RBP20.8■□□□□ 0.92
RTN1-209ENST00000611068 FBLN1P23142 703 aa20.79■□□□□ 0.92
RTN1-209ENST00000611068 WDR43Q15061 677 aaKnown RBP eCLIP20.79■□□□□ 0.92
RTN1-209ENST00000611068 AMOTL2Q9Y2J4 779 aa20.79■□□□□ 0.92
RTN1-209ENST00000611068 CGNL1Q0VF96 1302 aa20.79■□□□□ 0.92
RTN1-209ENST00000611068 A0A0U1RQG5 324 aaPredicted RBP20.78■□□□□ 0.92
RTN1-209ENST00000611068 WASLO00401 505 aaPredicted RBP20.78■□□□□ 0.92
RTN1-209ENST00000611068 RRAGDQ9NQL2 400 aaPredicted RBP20.78■□□□□ 0.92
RTN1-209ENST00000611068 ANKRD36BQ8N2N9 1353 aa20.77■□□□□ 0.92
RTN1-209ENST00000611068 PLEKHG1Q9ULL1 1385 aa20.77■□□□□ 0.92
RTN1-209ENST00000611068 HSP90AA2PQ14568 343 aaPredicted RBP20.76■□□□□ 0.91
RTN1-209ENST00000611068 TERF2IPQ9NYB0 399 aa20.75■□□□□ 0.91
RTN1-209ENST00000611068 PTPRUQ92729 1446 aa20.75■□□□□ 0.91
RTN1-209ENST00000611068 MTHFSP49914 203 aa20.74■□□□□ 0.91
RTN1-209ENST00000611068 NUDT16Q96DE0 195 aaKnown RBP20.74■□□□□ 0.91
RTN1-209ENST00000611068 ATAD2Q6PL18 1390 aa20.74■□□□□ 0.91
RTN1-209ENST00000611068 PDE4AP27815 886 aa20.74■□□□□ 0.91
RTN1-209ENST00000611068 HDGFL2Q7Z4V5 671 aaPredicted RBP20.74■□□□□ 0.91
RTN1-209ENST00000611068 CDCA7LQ96GN5 454 aa20.73■□□□□ 0.91
RTN1-209ENST00000611068 NPC1L1Q9UHC9 1359 aa20.72■□□□□ 0.91
RTN1-209ENST00000611068 FYB1O15117 783 aa20.72■□□□□ 0.91
RTN1-209ENST00000611068 PUS7Q96PZ0 661 aaKnown RBP20.72■□□□□ 0.91
RTN1-209ENST00000611068 ZRANB1Q9UGI0 708 aa20.72■□□□□ 0.91
RTN1-209ENST00000611068 KCNA6P17658 529 aa20.7■□□□□ 0.9
RTN1-209ENST00000611068 CD163L1Q9NR16 1453 aa20.7■□□□□ 0.9
RTN1-209ENST00000611068 SLC4A3P48751 1232 aa20.7■□□□□ 0.9
RTN1-209ENST00000611068 ANKLE2Q86XL3 938 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms