RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 TULP4Q9NRJ4 1543 aa24.66■■□□□ 1.54
SNAPC3-207ENST00000610884 MYO3AQ8NEV4 1616 aa24.65■■□□□ 1.54
SNAPC3-207ENST00000610884 NRXN3Q9Y4C0 1643 aa24.64■■□□□ 1.53
SNAPC3-207ENST00000610884 HDGFP51858 240 aaKnown RBP24.64■■□□□ 1.53
SNAPC3-207ENST00000610884 SBNO2Q9Y2G9 1366 aa24.64■■□□□ 1.53
SNAPC3-207ENST00000610884 RBM33Q96EV2 1170 aaKnown RBP24.63■■□□□ 1.53
SNAPC3-207ENST00000610884 EID1Q9Y6B2 187 aa24.63■■□□□ 1.53
SNAPC3-207ENST00000610884 NLRP13Q86W25 1043 aa24.61■■□□□ 1.53
SNAPC3-207ENST00000610884 THEMISQ8N1K5 641 aaPredicted RBP24.6■■□□□ 1.53
SNAPC3-207ENST00000610884 PPP2R1AP30153 589 aa24.6■■□□□ 1.53
SNAPC3-207ENST00000610884 CABP1Q9NZU7 370 aa24.6■■□□□ 1.53
SNAPC3-207ENST00000610884 NSD3Q9BZ95 1437 aa24.59■■□□□ 1.53
SNAPC3-207ENST00000610884 NLRP1Q9C000 1473 aa24.59■■□□□ 1.53
SNAPC3-207ENST00000610884 ADAMTS13Q76LX8 1427 aa24.58■■□□□ 1.53
SNAPC3-207ENST00000610884 LRPPRCP42704 1394 aaKnown RBP24.58■■□□□ 1.52
SNAPC3-207ENST00000610884 SLC24A1O60721 1099 aa24.57■■□□□ 1.52
SNAPC3-207ENST00000610884 SETD1AO15047 1707 aaKnown RBP24.56■■□□□ 1.52
SNAPC3-207ENST00000610884 ROBO2Q9HCK4 1378 aa24.56■■□□□ 1.52
SNAPC3-207ENST00000610884 AMOTL2Q9Y2J4 779 aa24.54■■□□□ 1.52
SNAPC3-207ENST00000610884 BRD4O60885 1362 aaPredicted RBP24.53■■□□□ 1.52
SNAPC3-207ENST00000610884 ABCC11Q96J66 1382 aa24.53■■□□□ 1.52
SNAPC3-207ENST00000610884 TSHZ2Q9NRE2 1034 aa24.53■■□□□ 1.52
SNAPC3-207ENST00000610884 FBLN1P23142 703 aa24.52■■□□□ 1.52
SNAPC3-207ENST00000610884 GGNBP2Q9H3C7 697 aa24.52■■□□□ 1.52
SNAPC3-207ENST00000610884 PTPRUQ92729 1446 aa24.51■■□□□ 1.51
SNAPC3-207ENST00000610884 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.51■■□□□ 1.51
SNAPC3-207ENST00000610884 A0A1W2PP64 1363 aa24.51■■□□□ 1.51
SNAPC3-207ENST00000610884 PLEKHG1Q9ULL1 1385 aa24.5■■□□□ 1.51
SNAPC3-207ENST00000610884 MORC1Q86VD1 984 aa24.5■■□□□ 1.51
SNAPC3-207ENST00000610884 ADAMTS8Q9UP79 889 aa24.5■■□□□ 1.51
SNAPC3-207ENST00000610884 WASLO00401 505 aaPredicted RBP24.48■■□□□ 1.51
SNAPC3-207ENST00000610884 ADAMTSL3P82987 1691 aa24.47■■□□□ 1.51
SNAPC3-207ENST00000610884 IRX6P78412 446 aaPredicted RBP24.45■■□□□ 1.51
SNAPC3-207ENST00000610884 KCNA6P17658 529 aa24.45■■□□□ 1.5
SNAPC3-207ENST00000610884 CEP170BQ9Y4F5 1589 aaPredicted RBP24.44■■□□□ 1.5
SNAPC3-207ENST00000610884 CCDC146Q8IYE0 955 aa24.43■■□□□ 1.5
SNAPC3-207ENST00000610884 ANKRD36BQ8N2N9 1353 aa24.43■■□□□ 1.5
SNAPC3-207ENST00000610884 NUDT16Q96DE0 195 aaKnown RBP24.43■■□□□ 1.5
SNAPC3-207ENST00000610884 ARHGAP23Q9P227 1491 aa24.43■■□□□ 1.5
SNAPC3-207ENST00000610884 ZRANB1Q9UGI0 708 aa24.43■■□□□ 1.5
SNAPC3-207ENST00000610884 ANKLE2Q86XL3 938 aa24.42■■□□□ 1.5
SNAPC3-207ENST00000610884 CGNL1Q0VF96 1302 aa24.42■■□□□ 1.5
SNAPC3-207ENST00000610884 PRR36Q9H6K5 1346 aa24.42■■□□□ 1.5
SNAPC3-207ENST00000610884 SLIT1O75093 1534 aa24.42■■□□□ 1.5
SNAPC3-207ENST00000610884 FKBP8Q14318 412 aa24.41■■□□□ 1.5
SNAPC3-207ENST00000610884 TBX22Q9Y458 520 aa24.41■■□□□ 1.5
SNAPC3-207ENST00000610884 CD163L1Q9NR16 1453 aa24.41■■□□□ 1.5
SNAPC3-207ENST00000610884 FYB1O15117 783 aa24.4■■□□□ 1.5
SNAPC3-207ENST00000610884 ZBED9Q6R2W3 1325 aa24.4■■□□□ 1.5
SNAPC3-207ENST00000610884 TERF2IPQ9NYB0 399 aa24.4■■□□□ 1.5
SNAPC3-207ENST00000610884 ATAD2Q6PL18 1390 aa24.39■■□□□ 1.5
SNAPC3-207ENST00000610884 MTHFSP49914 203 aa24.39■■□□□ 1.49
SNAPC3-207ENST00000610884 HSPA2P54652 639 aa24.39■■□□□ 1.49
SNAPC3-207ENST00000610884 PMFBP1Q8TBY8 1022 aa24.38■■□□□ 1.49
SNAPC3-207ENST00000610884 MED14O60244 1454 aa24.38■■□□□ 1.49
SNAPC3-207ENST00000610884 WDR43Q15061 677 aaKnown RBP eCLIP24.37■■□□□ 1.49
SNAPC3-207ENST00000610884 HDGFL2Q7Z4V5 671 aaPredicted RBP24.37■■□□□ 1.49
SNAPC3-207ENST00000610884 PUS7Q96PZ0 661 aaKnown RBP24.37■■□□□ 1.49
SNAPC3-207ENST00000610884 DLC1Q96QB1 1528 aa24.36■■□□□ 1.49
SNAPC3-207ENST00000610884 PPIP5K1Q6PFW1 1433 aa24.36■■□□□ 1.49
SNAPC3-207ENST00000610884 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.35■■□□□ 1.49
SNAPC3-207ENST00000610884 NPC1L1Q9UHC9 1359 aa24.34■■□□□ 1.49
SNAPC3-207ENST00000610884 PPM1GO15355 546 aaPredicted RBP24.34■■□□□ 1.49
SNAPC3-207ENST00000610884 CDCA7LQ96GN5 454 aa24.34■■□□□ 1.49
SNAPC3-207ENST00000610884 NME9Q86XW9 330 aa24.34■■□□□ 1.49
SNAPC3-207ENST00000610884 CCDC61Q9Y6R9 512 aa24.33■■□□□ 1.49
SNAPC3-207ENST00000610884 TECPR2O15040 1411 aa24.32■■□□□ 1.48
SNAPC3-207ENST00000610884 FAM135BQ49AJ0 1406 aa24.31■■□□□ 1.48
SNAPC3-207ENST00000610884 SETD1BQ9UPS6 1966 aaKnown RBP24.3■■□□□ 1.48
SNAPC3-207ENST00000610884 SOX12O15370 315 aa24.29■■□□□ 1.48
SNAPC3-207ENST00000610884 SIRT1Q96EB6 747 aa24.28■■□□□ 1.48
SNAPC3-207ENST00000610884 CPS1P31327 1500 aa24.28■■□□□ 1.48
SNAPC3-207ENST00000610884 KDM4FA0A1W2PPD8 638 aa24.27■■□□□ 1.48
SNAPC3-207ENST00000610884 NEFLP07196 543 aa24.26■■□□□ 1.47
SNAPC3-207ENST00000610884 NEUROD2Q15784 382 aa24.26■■□□□ 1.47
SNAPC3-207ENST00000610884 ACEP12821 1306 aa24.26■■□□□ 1.47
SNAPC3-207ENST00000610884 APAF1O14727 1248 aa24.24■■□□□ 1.47
SNAPC3-207ENST00000610884 PLEKHG5O94827 1062 aa24.24■■□□□ 1.47
SNAPC3-207ENST00000610884 RRP7AQ9Y3A4 280 aaKnown RBP24.24■■□□□ 1.47
SNAPC3-207ENST00000610884 ATP7BP35670 1465 aa24.23■■□□□ 1.47
SNAPC3-207ENST00000610884 KNDC1Q76NI1 1749 aa24.23■■□□□ 1.47
SNAPC3-207ENST00000610884 C14orf37Q86TY3 774 aa24.23■■□□□ 1.47
SNAPC3-207ENST00000610884 NINLQ9Y2I6 1382 aa24.22■■□□□ 1.47
SNAPC3-207ENST00000610884 NUTM2GQ5VZR2 741 aa24.21■■□□□ 1.47
SNAPC3-207ENST00000610884 RRS1Q15050 365 aaKnown RBP24.21■■□□□ 1.47
SNAPC3-207ENST00000610884 U2SURPO15042 1029 aaKnown RBP24.2■■□□□ 1.46
SNAPC3-207ENST00000610884 EMILIN1Q9Y6C2 1016 aa24.2■■□□□ 1.46
SNAPC3-207ENST00000610884 CPSF1Q10570 1443 aaKnown RBP24.18■■□□□ 1.46
SNAPC3-207ENST00000610884 RGPD8O14715 1765 aaPredicted RBP24.18■■□□□ 1.46
SNAPC3-207ENST00000610884 NPHP4O75161 1426 aaPredicted RBP24.18■■□□□ 1.46
SNAPC3-207ENST00000610884 U2AF1L5P0DN76 240 aaPredicted RBP24.18■■□□□ 1.46
SNAPC3-207ENST00000610884 U2AF1Q01081 240 aaKnown RBP eCLIP24.18■■□□□ 1.46
SNAPC3-207ENST00000610884 NGDNQ8NEJ9 315 aaKnown RBP24.18■■□□□ 1.46
SNAPC3-207ENST00000610884 NKTRP30414 1462 aaKnown RBP24.17■■□□□ 1.46
SNAPC3-207ENST00000610884 ANP32EQ9BTT0 268 aa24.17■■□□□ 1.46
SNAPC3-207ENST00000610884 BLMP54132 1417 aaPredicted RBP24.16■■□□□ 1.46
SNAPC3-207ENST00000610884 NUDCQ9Y266 331 aa24.16■■□□□ 1.46
SNAPC3-207ENST00000610884 DMRT2Q9Y5R5 561 aa24.16■■□□□ 1.46
SNAPC3-207ENST00000610884 ZNF142P52746 1687 aaPredicted RBP24.16■■□□□ 1.46
SNAPC3-207ENST00000610884 POLR3AO14802 1390 aaPredicted RBP24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms