RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 PDE4AP27815 886 aa9.1□□□□□ -0.95
CSDE1-218ENST00000610726 SYTL4Q96C24 671 aaPredicted RBP9.1□□□□□ -0.95
CSDE1-218ENST00000610726 TAF7LQ5H9L4 462 aa9.1□□□□□ -0.95
CSDE1-218ENST00000610726 ATAD2Q6PL18 1390 aa9.1□□□□□ -0.95
CSDE1-218ENST00000610726 WDR7Q9Y4E6 1490 aa9.1□□□□□ -0.95
CSDE1-218ENST00000610726 KDM5BQ9UGL1 1544 aa9.1□□□□□ -0.95
CSDE1-218ENST00000610726 ABCA5Q8WWZ7 1642 aa9.1□□□□□ -0.95
CSDE1-218ENST00000610726 GORABQ5T7V8 394 aa9.09□□□□□ -0.95
CSDE1-218ENST00000610726 HDAC5Q9UQL6 1122 aa9.09□□□□□ -0.95
CSDE1-218ENST00000610726 BCAR3O75815 825 aa9.09□□□□□ -0.95
CSDE1-218ENST00000610726 API5Q9BZZ5 524 aaKnown RBP9.09□□□□□ -0.95
CSDE1-218ENST00000610726 C14orf93Q9H972 538 aaKnown RBP9.09□□□□□ -0.95
CSDE1-218ENST00000610726 CFAP44Q96MT7 982 aa9.08□□□□□ -0.96
CSDE1-218ENST00000610726 C9orf78Q9NZ63 289 aaPredicted RBP9.08□□□□□ -0.96
CSDE1-218ENST00000610726 AMOTL2Q9Y2J4 779 aa9.08□□□□□ -0.96
CSDE1-218ENST00000610726 KIF16BQ96L93 1317 aa9.07□□□□□ -0.96
CSDE1-218ENST00000610726 TCOF1Q13428 1488 aaKnown RBP9.07□□□□□ -0.96
CSDE1-218ENST00000610726 IPO9Q96P70 1041 aaKnown RBP9.07□□□□□ -0.96
CSDE1-218ENST00000610726 DISP3Q9P2K9 1392 aa9.07□□□□□ -0.96
CSDE1-218ENST00000610726 GTF2E1P29083 439 aaPredicted RBP9.07□□□□□ -0.96
CSDE1-218ENST00000610726 SLC4A3P48751 1232 aa9.07□□□□□ -0.96
CSDE1-218ENST00000610726 NME9Q86XW9 330 aa9.07□□□□□ -0.96
CSDE1-218ENST00000610726 FAM161AQ3B820 660 aa9.07□□□□□ -0.96
CSDE1-218ENST00000610726 A2MP01023 1474 aa9.06□□□□□ -0.96
CSDE1-218ENST00000610726 AIMP1Q12904 312 aaKnown RBP9.06□□□□□ -0.96
CSDE1-218ENST00000610726 RILPL2Q969X0 211 aa9.06□□□□□ -0.96
CSDE1-218ENST00000610726 LNPKQ9C0E8 428 aa9.06□□□□□ -0.96
CSDE1-218ENST00000610726 NEXNQ0ZGT2 675 aa9.06□□□□□ -0.96
CSDE1-218ENST00000610726 NOL8Q76FK4 1167 aaKnown RBP9.06□□□□□ -0.96
CSDE1-218ENST00000610726 FOXD4L1Q9NU39 408 aa9.06□□□□□ -0.96
CSDE1-218ENST00000610726 TWISTNBQ3B726 338 aaPredicted RBP9.05□□□□□ -0.96
CSDE1-218ENST00000610726 GAS2L2Q8NHY3 880 aa9.05□□□□□ -0.96
CSDE1-218ENST00000610726 PBRM1Q86U86 1689 aa9.05□□□□□ -0.96
CSDE1-218ENST00000610726 ABCC2Q92887 1545 aa9.05□□□□□ -0.96
CSDE1-218ENST00000610726 GPATCH3Q96I76 525 aa9.05□□□□□ -0.96
CSDE1-218ENST00000610726 TARBP1Q13395 1621 aaKnown RBP9.05□□□□□ -0.96
CSDE1-218ENST00000610726 WASLO00401 505 aaPredicted RBP9.05□□□□□ -0.96
CSDE1-218ENST00000610726 ZC3H6P61129 1189 aaKnown RBP9.05□□□□□ -0.96
CSDE1-218ENST00000610726 THUMPD2Q9BTF0 503 aaKnown RBP9.05□□□□□ -0.96
CSDE1-218ENST00000610726 STRN4Q9NRL3 753 aa9.05□□□□□ -0.96
CSDE1-218ENST00000610726 SCAF11Q99590 1463 aaKnown RBP9.05□□□□□ -0.96
CSDE1-218ENST00000610726 FBLN1P23142 703 aa9.04□□□□□ -0.96
CSDE1-218ENST00000610726 ZNF518AQ6AHZ1 1483 aa9.04□□□□□ -0.96
CSDE1-218ENST00000610726 CFAP43Q8NDM7 1665 aa9.04□□□□□ -0.96
CSDE1-218ENST00000610726 DUOX2Q9NRD8 1548 aa9.04□□□□□ -0.96
CSDE1-218ENST00000610726 FAM135AQ9P2D6 1515 aa9.04□□□□□ -0.96
CSDE1-218ENST00000610726 TRIM44Q96DX7 344 aaPredicted RBP9.04□□□□□ -0.96
CSDE1-218ENST00000610726 EMILIN1Q9Y6C2 1016 aa9.04□□□□□ -0.96
CSDE1-218ENST00000610726 ITSN2Q9NZM3 1697 aa9.04□□□□□ -0.96
CSDE1-218ENST00000610726 FOXO3O43524 673 aa9.04□□□□□ -0.96
CSDE1-218ENST00000610726 PLCB2Q00722 1185 aa9.04□□□□□ -0.96
CSDE1-218ENST00000610726 WWC1Q8IX03 1113 aa9.04□□□□□ -0.96
CSDE1-218ENST00000610726 CEP170Q5SW79 1584 aa9.04□□□□□ -0.96
CSDE1-218ENST00000610726 ZRSR1Q15695 479 aaKnown RBP9.04□□□□□ -0.96
CSDE1-218ENST00000610726 PPP6R1Q9UPN7 881 aa9.04□□□□□ -0.96
CSDE1-218ENST00000610726 TMPOP42166 694 aaKnown RBP9.03□□□□□ -0.96
CSDE1-218ENST00000610726 FCHSD2O94868 740 aa9.02□□□□□ -0.96
CSDE1-218ENST00000610726 DDX58O95786 925 aaKnown RBP9.02□□□□□ -0.96
CSDE1-218ENST00000610726 PLEKHO1Q53GL0 409 aaPredicted RBP9.02□□□□□ -0.96
CSDE1-218ENST00000610726 MAGI3Q5TCQ9 1506 aa9.02□□□□□ -0.97
CSDE1-218ENST00000610726 WDR63Q8IWG1 891 aa9.02□□□□□ -0.97
CSDE1-218ENST00000610726 ZNF428Q96B54 188 aa9.02□□□□□ -0.97
CSDE1-218ENST00000610726 C1orf115Q9H7X2 142 aa9.02□□□□□ -0.97
CSDE1-218ENST00000610726 NOB1Q9ULX3 412 aaKnown RBP9.02□□□□□ -0.97
CSDE1-218ENST00000610726 GOLGA6L4A6NEF3 574 aa9.02□□□□□ -0.97
CSDE1-218ENST00000610726 DCTN1Q14203 1278 aa9.02□□□□□ -0.97
CSDE1-218ENST00000610726 ZNF530Q6P9A1 599 aaPredicted RBP9.02□□□□□ -0.97
CSDE1-218ENST00000610726 SLC4A2P04920 1241 aa9.01□□□□□ -0.97
CSDE1-218ENST00000610726 GZF1Q9H116 711 aaPredicted RBP9.01□□□□□ -0.97
CSDE1-218ENST00000610726 SAMD9Q5K651 1589 aa9.01□□□□□ -0.97
CSDE1-218ENST00000610726 RIC3Q7Z5B4 369 aa9.01□□□□□ -0.97
CSDE1-218ENST00000610726 PRDM11Q9NQV5 511 aa9.01□□□□□ -0.97
CSDE1-218ENST00000610726 ABCC10Q5T3U5 1492 aa9.01□□□□□ -0.97
CSDE1-218ENST00000610726 PRAG1Q86YV5 1406 aa9.01□□□□□ -0.97
CSDE1-218ENST00000610726 PTMAP06454 111 aaKnown RBP9.01□□□□□ -0.97
CSDE1-218ENST00000610726 SLFN5Q08AF3 891 aa9.01□□□□□ -0.97
CSDE1-218ENST00000610726 AEBP2Q6ZN18 517 aaPredicted RBP9.01□□□□□ -0.97
CSDE1-218ENST00000610726 TESK2Q96S53 571 aa9.01□□□□□ -0.97
CSDE1-218ENST00000610726 MIS18AQ9NYP9 233 aa9□□□□□ -0.97
CSDE1-218ENST00000610726 TNRQ92752 1358 aa9□□□□□ -0.97
CSDE1-218ENST00000610726 FRAT2O75474 233 aaPredicted RBP9□□□□□ -0.97
CSDE1-218ENST00000610726 PDE3AQ14432 1141 aa9□□□□□ -0.97
CSDE1-218ENST00000610726 HDGFL1Q5TGJ6 251 aa9□□□□□ -0.97
CSDE1-218ENST00000610726 TOM1L2Q6ZVM7 507 aa9□□□□□ -0.97
CSDE1-218ENST00000610726 PHF8Q9UPP1 1060 aa9□□□□□ -0.97
CSDE1-218ENST00000610726 PZPP20742 1482 aa9□□□□□ -0.97
CSDE1-218ENST00000610726 CCDC30Q5VVM6 783 aa9□□□□□ -0.97
CSDE1-218ENST00000610726 TATP17735 454 aaPredicted RBP8.99□□□□□ -0.97
CSDE1-218ENST00000610726 NFE2L2Q16236 605 aa8.99□□□□□ -0.97
CSDE1-218ENST00000610726 DDX54Q8TDD1 881 aaKnown RBP8.99□□□□□ -0.97
CSDE1-218ENST00000610726 ISY1Q9ULR0 285 aaKnown RBP8.99□□□□□ -0.97
CSDE1-218ENST00000610726 SMG6Q86US8 1419 aaKnown RBP8.99□□□□□ -0.97
CSDE1-218ENST00000610726 UBTFL1P0CB47 393 aaPredicted RBP8.99□□□□□ -0.97
CSDE1-218ENST00000610726 MCM10Q7L590 875 aa8.99□□□□□ -0.97
CSDE1-218ENST00000610726 AMER1Q5JTC6 1135 aaPredicted RBP8.99□□□□□ -0.97
CSDE1-218ENST00000610726 USHBP1Q8N6Y0 703 aa8.99□□□□□ -0.97
CSDE1-218ENST00000610726 ATF7IPQ6VMQ6 1270 aa8.98□□□□□ -0.97
CSDE1-218ENST00000610726 RALGAPBQ86X10 1494 aa8.98□□□□□ -0.97
CSDE1-218ENST00000610726 SHANK2Q9UPX8 1470 aa8.98□□□□□ -0.97
CSDE1-218ENST00000610726 IFIT2P09913 472 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms