RNA–Protein interactions for RNA: ENST00000610538.4

TP53-219, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-219ENST00000610538 UBR1Q8IWV7 1749 aa16.68■□□□□ 0.26
TP53-219ENST00000610538 PARD3Q8TEW0 1356 aa16.68■□□□□ 0.26
TP53-219ENST00000610538 NLRP1Q9C000 1473 aa16.68■□□□□ 0.26
TP53-219ENST00000610538 ARHGEF28Q8N1W1 1705 aaKnown RBP16.67■□□□□ 0.26
TP53-219ENST00000610538 PNISRQ8TF01 805 aaKnown RBP16.67■□□□□ 0.26
TP53-219ENST00000610538 CDK19Q9BWU1 502 aa16.67■□□□□ 0.26
TP53-219ENST00000610538 MYO3AQ8NEV4 1616 aa16.66■□□□□ 0.26
TP53-219ENST00000610538 TNNT2P45379 298 aaPredicted RBP16.66■□□□□ 0.26
TP53-219ENST00000610538 NLRP13Q86W25 1043 aa16.66■□□□□ 0.26
TP53-219ENST00000610538 RIMS1Q86UR5 1692 aaKnown RBP16.65■□□□□ 0.26
TP53-219ENST00000610538 TULP4Q9NRJ4 1543 aa16.64■□□□□ 0.25
TP53-219ENST00000610538 MYOM1P52179 1685 aa16.64■□□□□ 0.25
TP53-219ENST00000610538 LRPPRCP42704 1394 aaKnown RBP16.64■□□□□ 0.25
TP53-219ENST00000610538 NRXN3Q9Y4C0 1643 aa16.63■□□□□ 0.25
TP53-219ENST00000610538 NUTM2FA1L443 756 aa16.63■□□□□ 0.25
TP53-219ENST00000610538 PPP4R3CPQ6ZMV5 832 aa16.62■□□□□ 0.25
TP53-219ENST00000610538 CABP1Q9NZU7 370 aa16.62■□□□□ 0.25
TP53-219ENST00000610538 ABCC11Q96J66 1382 aa16.62■□□□□ 0.25
TP53-219ENST00000610538 PPP2R1AP30153 589 aa16.62■□□□□ 0.25
TP53-219ENST00000610538 SALL2Q9Y467 1007 aaPredicted RBP16.62■□□□□ 0.25
TP53-219ENST00000610538 ADAMTS13Q76LX8 1427 aa16.61■□□□□ 0.25
TP53-219ENST00000610538 DAXXQ9UER7 740 aaPredicted RBP16.61■□□□□ 0.25
TP53-219ENST00000610538 BRD4O60885 1362 aaPredicted RBP16.61■□□□□ 0.25
TP53-219ENST00000610538 NCKAP5LQ9HCH0 1330 aa16.61■□□□□ 0.25
TP53-219ENST00000610538 NSD3Q9BZ95 1437 aa16.6■□□□□ 0.25
TP53-219ENST00000610538 PLEKHG1Q9ULL1 1385 aa16.6■□□□□ 0.25
TP53-219ENST00000610538 AMOTL2Q9Y2J4 779 aa16.59■□□□□ 0.25
TP53-219ENST00000610538 ROBO2Q9HCK4 1378 aa16.58■□□□□ 0.25
TP53-219ENST00000610538 NPM3O75607 178 aaKnown RBP16.58■□□□□ 0.25
TP53-219ENST00000610538 SETD1AO15047 1707 aaKnown RBP16.58■□□□□ 0.24
TP53-219ENST00000610538 MORC1Q86VD1 984 aa16.57■□□□□ 0.24
TP53-219ENST00000610538 RBM33Q96EV2 1170 aaKnown RBP16.57■□□□□ 0.24
TP53-219ENST00000610538 WASLO00401 505 aaPredicted RBP16.56■□□□□ 0.24
TP53-219ENST00000610538 PUS7Q96PZ0 661 aaKnown RBP16.56■□□□□ 0.24
TP53-219ENST00000610538 ANKLE2Q86XL3 938 aa16.55■□□□□ 0.24
TP53-219ENST00000610538 A0A1W2PP64 1363 aa16.55■□□□□ 0.24
TP53-219ENST00000610538 MYT1Q01538 1121 aa16.55■□□□□ 0.24
TP53-219ENST00000610538 GGNBP2Q9H3C7 697 aa16.55■□□□□ 0.24
TP53-219ENST00000610538 TBX22Q9Y458 520 aa16.55■□□□□ 0.24
TP53-219ENST00000610538 PTPRUQ92729 1446 aa16.55■□□□□ 0.24
TP53-219ENST00000610538 ADAMTSL3P82987 1691 aa16.55■□□□□ 0.24
TP53-219ENST00000610538 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.54■□□□□ 0.24
TP53-219ENST00000610538 CGNL1Q0VF96 1302 aa16.54■□□□□ 0.24
TP53-219ENST00000610538 SLIT1O75093 1534 aa16.54■□□□□ 0.24
TP53-219ENST00000610538 ARHGAP23Q9P227 1491 aa16.54■□□□□ 0.24
TP53-219ENST00000610538 ANKRD36BQ8N2N9 1353 aa16.54■□□□□ 0.24
TP53-219ENST00000610538 TERF2IPQ9NYB0 399 aa16.54■□□□□ 0.24
TP53-219ENST00000610538 ATAD2Q6PL18 1390 aa16.53■□□□□ 0.24
TP53-219ENST00000610538 ADAMTS8Q9UP79 889 aa16.53■□□□□ 0.24
TP53-219ENST00000610538 CEP170BQ9Y4F5 1589 aaPredicted RBP16.53■□□□□ 0.24
TP53-219ENST00000610538 NUDT16Q96DE0 195 aaKnown RBP16.53■□□□□ 0.24
TP53-219ENST00000610538 KCNA6P17658 529 aa16.52■□□□□ 0.23
TP53-219ENST00000610538 NPC1L1Q9UHC9 1359 aa16.51■□□□□ 0.23
TP53-219ENST00000610538 HDGFL2Q7Z4V5 671 aaPredicted RBP16.51■□□□□ 0.23
TP53-219ENST00000610538 DLC1Q96QB1 1528 aa16.51■□□□□ 0.23
TP53-219ENST00000610538 ZBED9Q6R2W3 1325 aa16.5■□□□□ 0.23
TP53-219ENST00000610538 SETD1BQ9UPS6 1966 aaKnown RBP16.5■□□□□ 0.23
TP53-219ENST00000610538 MED14O60244 1454 aa16.5■□□□□ 0.23
TP53-219ENST00000610538 FBLN1P23142 703 aa16.49■□□□□ 0.23
TP53-219ENST00000610538 WDR43Q15061 677 aaKnown RBP eCLIP16.49■□□□□ 0.23
TP53-219ENST00000610538 SIRT1Q96EB6 747 aa16.49■□□□□ 0.23
TP53-219ENST00000610538 FYB1O15117 783 aa16.49■□□□□ 0.23
TP53-219ENST00000610538 FAM135BQ49AJ0 1406 aa16.49■□□□□ 0.23
TP53-219ENST00000610538 CCDC61Q9Y6R9 512 aa16.48■□□□□ 0.23
TP53-219ENST00000610538 TECPR2O15040 1411 aa16.48■□□□□ 0.23
TP53-219ENST00000610538 MTHFSP49914 203 aa16.48■□□□□ 0.23
TP53-219ENST00000610538 PRR36Q9H6K5 1346 aa16.48■□□□□ 0.23
TP53-219ENST00000610538 CD163L1Q9NR16 1453 aa16.47■□□□□ 0.23
TP53-219ENST00000610538 SUPT16HQ9Y5B9 1047 aaKnown RBP16.47■□□□□ 0.23
TP53-219ENST00000610538 CCDC146Q8IYE0 955 aa16.46■□□□□ 0.23
TP53-219ENST00000610538 TAOK2Q9UL54 1235 aa16.46■□□□□ 0.23
TP53-219ENST00000610538 PPIP5K1Q6PFW1 1433 aa16.46■□□□□ 0.23
TP53-219ENST00000610538 NINLQ9Y2I6 1382 aa16.45■□□□□ 0.22
TP53-219ENST00000610538 PMFBP1Q8TBY8 1022 aa16.45■□□□□ 0.22
TP53-219ENST00000610538 ZRANB1Q9UGI0 708 aa16.45■□□□□ 0.22
TP53-219ENST00000610538 HSPA2P54652 639 aa16.44■□□□□ 0.22
TP53-219ENST00000610538 FKBP8Q14318 412 aa16.43■□□□□ 0.22
TP53-219ENST00000610538 CPS1P31327 1500 aa16.43■□□□□ 0.22
TP53-219ENST00000610538 PPM1GO15355 546 aaPredicted RBP16.42■□□□□ 0.22
TP53-219ENST00000610538 IRX6P78412 446 aaPredicted RBP16.42■□□□□ 0.22
TP53-219ENST00000610538 NME9Q86XW9 330 aa16.42■□□□□ 0.22
TP53-219ENST00000610538 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.42■□□□□ 0.22
TP53-219ENST00000610538 ACEP12821 1306 aa16.4■□□□□ 0.22
TP53-219ENST00000610538 KDM4FA0A1W2PPD8 638 aa16.4■□□□□ 0.22
TP53-219ENST00000610538 CDCA7LQ96GN5 454 aa16.39■□□□□ 0.22
TP53-219ENST00000610538 KNDC1Q76NI1 1749 aa16.39■□□□□ 0.21
TP53-219ENST00000610538 C14orf37Q86TY3 774 aa16.38■□□□□ 0.21
TP53-219ENST00000610538 ATP7BP35670 1465 aa16.37■□□□□ 0.21
TP53-219ENST00000610538 APAF1O14727 1248 aa16.37■□□□□ 0.21
TP53-219ENST00000610538 NPHP4O75161 1426 aaPredicted RBP16.37■□□□□ 0.21
TP53-219ENST00000610538 SOX12O15370 315 aa16.36■□□□□ 0.21
TP53-219ENST00000610538 CPSF1Q10570 1443 aaKnown RBP16.36■□□□□ 0.21
TP53-219ENST00000610538 PLCB2Q00722 1185 aa16.36■□□□□ 0.21
TP53-219ENST00000610538 NEUROD2Q15784 382 aa16.36■□□□□ 0.21
TP53-219ENST00000610538 NGDNQ8NEJ9 315 aaKnown RBP16.36■□□□□ 0.21
TP53-219ENST00000610538 NSD2O96028 1365 aa16.36■□□□□ 0.21
TP53-219ENST00000610538 CFAP53Q96M91 514 aa16.35■□□□□ 0.21
TP53-219ENST00000610538 PTCH1Q13635 1447 aa16.35■□□□□ 0.21
TP53-219ENST00000610538 NEFLP07196 543 aa16.35■□□□□ 0.21
TP53-219ENST00000610538 ZNF692Q9BU19 519 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms