RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 SENP3Q9H4L4 574 aaPredicted RBP37.19■■■■□ 3.54
CSPG5-205ENST00000610462 POLR3AO14802 1390 aaPredicted RBP37.19■■■■□ 3.54
CSPG5-205ENST00000610462 MORC1Q86VD1 984 aa37.18■■■■□ 3.54
CSPG5-205ENST00000610462 SAFB2Q14151 953 aaKnown RBP eCLIP37.17■■■■□ 3.54
CSPG5-205ENST00000610462 CABP2Q9NPB3 220 aa37.17■■■■□ 3.54
CSPG5-205ENST00000610462 RIMS2Q9UQ26 1411 aa37.17■■■■□ 3.54
CSPG5-205ENST00000610462 CGNL1Q0VF96 1302 aa37.16■■■■□ 3.54
CSPG5-205ENST00000610462 PLEKHH1Q9ULM0 1364 aa37.16■■■■□ 3.54
CSPG5-205ENST00000610462 NINLQ9Y2I6 1382 aa37.16■■■■□ 3.54
CSPG5-205ENST00000610462 SETD1AO15047 1707 aaKnown RBP37.13■■■■□ 3.53
CSPG5-205ENST00000610462 ZMYM3Q14202 1370 aa37.13■■■■□ 3.53
CSPG5-205ENST00000610462 ZNF521Q96K83 1311 aa37.13■■■■□ 3.53
CSPG5-205ENST00000610462 PRAM1Q96QH2 718 aa37.13■■■■□ 3.53
CSPG5-205ENST00000610462 ESF1Q9H501 851 aaKnown RBP37.13■■■■□ 3.53
CSPG5-205ENST00000610462 NSD2O96028 1365 aa37.11■■■■□ 3.53
CSPG5-205ENST00000610462 POGKQ9P215 609 aa37.11■■■■□ 3.53
CSPG5-205ENST00000610462 MYT1Q01538 1121 aa37.09■■■■□ 3.53
CSPG5-205ENST00000610462 SHPRHQ149N8 1683 aa37.09■■■■□ 3.53
CSPG5-205ENST00000610462 DLC1Q96QB1 1528 aa37.08■■■■□ 3.53
CSPG5-205ENST00000610462 ATAD2Q6PL18 1390 aa37.08■■■■□ 3.53
CSPG5-205ENST00000610462 SRPK2P78362 688 aaKnown RBP37.08■■■■□ 3.53
CSPG5-205ENST00000610462 MINK1Q8N4C8 1332 aaPredicted RBP37.06■■■■□ 3.52
CSPG5-205ENST00000610462 CCDC146Q8IYE0 955 aa37.06■■■■□ 3.52
CSPG5-205ENST00000610462 CCDC136Q96JN2 1154 aa37.03■■■■□ 3.52
CSPG5-205ENST00000610462 RBM19Q9Y4C8 960 aaKnown RBP37.03■■■■□ 3.52
CSPG5-205ENST00000610462 GOLGA2Q08379 1002 aa37.03■■■■□ 3.52
CSPG5-205ENST00000610462 A0A1W2PP64 1363 aa37.02■■■■□ 3.52
CSPG5-205ENST00000610462 NRXN3Q9Y4C0 1643 aa37.01■■■■□ 3.52
CSPG5-205ENST00000610462 TNNT2P45379 298 aaPredicted RBP37■■■■□ 3.51
CSPG5-205ENST00000610462 ABCF1Q8NE71 845 aaKnown RBP eCLIP37■■■■□ 3.51
CSPG5-205ENST00000610462 NGEFQ8N5V2 710 aa37■■■■□ 3.51
CSPG5-205ENST00000610462 ABCC11Q96J66 1382 aa37■■■■□ 3.51
CSPG5-205ENST00000610462 APAF1O14727 1248 aa36.99■■■■□ 3.51
CSPG5-205ENST00000610462 DUSP27Q5VZP5 1158 aa36.99■■■■□ 3.51
CSPG5-205ENST00000610462 TNRQ92752 1358 aa36.96■■■■□ 3.51
CSPG5-205ENST00000610462 ANKRD26Q9UPS8 1709 aa36.96■■■■□ 3.51
CSPG5-205ENST00000610462 TERF2IPQ9NYB0 399 aa36.95■■■■□ 3.51
CSPG5-205ENST00000610462 CD163L1Q9NR16 1453 aa36.95■■■■□ 3.51
CSPG5-205ENST00000610462 SLFN5Q08AF3 891 aa36.94■■■■□ 3.5
CSPG5-205ENST00000610462 MTHFSP49914 203 aa36.94■■■■□ 3.5
CSPG5-205ENST00000610462 CDK19Q9BWU1 502 aa36.94■■■■□ 3.5
CSPG5-205ENST00000610462 EXOC6Q8TAG9 804 aa36.93■■■■□ 3.5
CSPG5-205ENST00000610462 CFAP53Q96M91 514 aa36.92■■■■□ 3.5
CSPG5-205ENST00000610462 TRMT2AQ8IZ69 625 aaKnown RBP36.91■■■■□ 3.5
CSPG5-205ENST00000610462 UBR1Q8IWV7 1749 aa36.91■■■■□ 3.5
CSPG5-205ENST00000610462 HDGFP51858 240 aaKnown RBP36.89■■■■□ 3.5
CSPG5-205ENST00000610462 MED14O60244 1454 aa36.88■■■■□ 3.49
CSPG5-205ENST00000610462 KNDC1Q76NI1 1749 aa36.87■■■■□ 3.49
CSPG5-205ENST00000610462 WAPLQ7Z5K2 1190 aa36.86■■■■□ 3.49
CSPG5-205ENST00000610462 HDGFL2Q7Z4V5 671 aaPredicted RBP36.84■■■■□ 3.49
CSPG5-205ENST00000610462 PLIN1O60240 522 aa36.83■■■■□ 3.49
CSPG5-205ENST00000610462 RUNDC1Q96C34 613 aa36.83■■■■□ 3.49
CSPG5-205ENST00000610462 KIF20BQ96Q89 1820 aa36.83■■■■□ 3.49
CSPG5-205ENST00000610462 METP08581 1390 aa36.82■■■■□ 3.49
CSPG5-205ENST00000610462 NLRP1Q9C000 1473 aa36.82■■■■□ 3.49
CSPG5-205ENST00000610462 E9PSI1 815 aa36.81■■■■□ 3.48
CSPG5-205ENST00000610462 IQSEC2Q5JU85 1478 aa36.81■■■■□ 3.48
CSPG5-205ENST00000610462 TMEM2Q9UHN6 1383 aa36.8■■■■□ 3.48
CSPG5-205ENST00000610462 FYB1O15117 783 aa36.79■■■■□ 3.48
CSPG5-205ENST00000610462 GGNBP2Q9H3C7 697 aa36.79■■■■□ 3.48
CSPG5-205ENST00000610462 CABP1Q9NZU7 370 aa36.79■■■■□ 3.48
CSPG5-205ENST00000610462 NKTRP30414 1462 aaKnown RBP36.79■■■■□ 3.48
CSPG5-205ENST00000610462 SPINK5Q9NQ38 1064 aaPredicted RBP36.79■■■■□ 3.48
CSPG5-205ENST00000610462 ATP7BP35670 1465 aa36.78■■■■□ 3.48
CSPG5-205ENST00000610462 TECPR2O15040 1411 aa36.76■■■■□ 3.48
CSPG5-205ENST00000610462 SIRT1Q96EB6 747 aa36.76■■■■□ 3.47
CSPG5-205ENST00000610462 FAM135BQ49AJ0 1406 aa36.75■■■■□ 3.47
CSPG5-205ENST00000610462 WWC1Q8IX03 1113 aa36.75■■■■□ 3.47
CSPG5-205ENST00000610462 CPS1P31327 1500 aa36.74■■■■□ 3.47
CSPG5-205ENST00000610462 CRBNQ96SW2 442 aa36.73■■■■□ 3.47
CSPG5-205ENST00000610462 TCP11L2Q8N4U5 519 aa36.71■■■■□ 3.47
CSPG5-205ENST00000610462 DMRT2Q9Y5R5 561 aa36.71■■■■□ 3.47
CSPG5-205ENST00000610462 COL3A1P02461 1466 aaPredicted RBP36.7■■■■□ 3.47
CSPG5-205ENST00000610462 WASLO00401 505 aaPredicted RBP36.7■■■■□ 3.46
CSPG5-205ENST00000610462 GOLGA6L2Q8N9W4 650 aaPredicted RBP36.7■■■■□ 3.46
CSPG5-205ENST00000610462 TXNDC2Q86VQ3 553 aa36.69■■■■□ 3.46
CSPG5-205ENST00000610462 PHF23Q9BUL5 403 aaPredicted RBP36.68■■■■□ 3.46
CSPG5-205ENST00000610462 C3P01024 1663 aa36.68■■■■□ 3.46
CSPG5-205ENST00000610462 NCBP3Q53F19 620 aaKnown RBP36.68■■■■□ 3.46
CSPG5-205ENST00000610462 ADGRB2O60241 1585 aa36.66■■■■□ 3.46
CSPG5-205ENST00000610462 U2AF1L5P0DN76 240 aaPredicted RBP36.66■■■■□ 3.46
CSPG5-205ENST00000610462 U2AF1Q01081 240 aaKnown RBP eCLIP36.66■■■■□ 3.46
CSPG5-205ENST00000610462 ADAMTS13Q76LX8 1427 aa36.65■■■■□ 3.46
CSPG5-205ENST00000610462 C20orf194Q5TEA3 1177 aa36.65■■■■□ 3.46
CSPG5-205ENST00000610462 CCDC27Q2M243 656 aa36.64■■■■□ 3.46
CSPG5-205ENST00000610462 PLEKHG1Q9ULL1 1385 aa36.63■■■■□ 3.45
CSPG5-205ENST00000610462 RRP7AQ9Y3A4 280 aaKnown RBP36.63■■■■□ 3.45
CSPG5-205ENST00000610462 FER1L4A9Z1Z3 1794 aa36.63■■■■□ 3.45
CSPG5-205ENST00000610462 NEUROD2Q15784 382 aa36.62■■■■□ 3.45
CSPG5-205ENST00000610462 WDR63Q8IWG1 891 aa36.62■■■■□ 3.45
CSPG5-205ENST00000610462 CPSF1Q10570 1443 aaKnown RBP36.62■■■■□ 3.45
CSPG5-205ENST00000610462 PPIP5K1Q6PFW1 1433 aa36.62■■■■□ 3.45
CSPG5-205ENST00000610462 CEBPAP49715 358 aaPredicted RBP36.6■■■■□ 3.45
CSPG5-205ENST00000610462 FANCIQ9NVI1 1328 aa36.58■■■■□ 3.45
CSPG5-205ENST00000610462 PNPLA6Q8IY17 1366 aa36.57■■■■□ 3.45
CSPG5-205ENST00000610462 EDC4Q6P2E9 1401 aaKnown RBP36.57■■■■□ 3.44
CSPG5-205ENST00000610462 CDC42BPGQ6DT37 1551 aa36.57■■■■□ 3.44
CSPG5-205ENST00000610462 LTKP29376 864 aa36.57■■■■□ 3.44
CSPG5-205ENST00000610462 MON2Q7Z3U7 1717 aa36.56■■■■□ 3.44
CSPG5-205ENST00000610462 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.55■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms