RNA–Protein interactions for RNA: ENST00000608788.5

LINC01278-203, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 5 BASIC

Gene LINC01278, Length 820 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-203ENST00000608788 PRAG1Q86YV5 1406 aa21.89■■□□□ 1.1
LINC01278-203ENST00000608788 ATRNO75882 1429 aa21.89■■□□□ 1.09
LINC01278-203ENST00000608788 COL22A1Q8NFW1 1626 aaPredicted RBP21.88■■□□□ 1.09
LINC01278-203ENST00000608788 CLTCL1P53675 1640 aa21.87■■□□□ 1.09
LINC01278-203ENST00000608788 ZNF326Q5BKZ1 582 aaKnown RBP21.86■■□□□ 1.09
LINC01278-203ENST00000608788 ORAI2Q96SN7 254 aa21.86■■□□□ 1.09
LINC01278-203ENST00000608788 USP21Q9UK80 565 aa21.86■■□□□ 1.09
LINC01278-203ENST00000608788 TRPC5Q9UL62 973 aaPredicted RBP21.86■■□□□ 1.09
LINC01278-203ENST00000608788 ROBO2Q9HCK4 1378 aa21.86■■□□□ 1.09
LINC01278-203ENST00000608788 MYOM2P54296 1465 aa21.83■■□□□ 1.09
LINC01278-203ENST00000608788 BCL9LQ86UU0 1499 aa21.81■■□□□ 1.08
LINC01278-203ENST00000608788 ZRANB1Q9UGI0 708 aa21.79■■□□□ 1.08
LINC01278-203ENST00000608788 PXDNQ92626 1479 aa21.77■■□□□ 1.08
LINC01278-203ENST00000608788 KIF1BO60333 1816 aa21.76■■□□□ 1.07
LINC01278-203ENST00000608788 HFM1A2PYH4 1435 aa21.76■■□□□ 1.07
LINC01278-203ENST00000608788 CCDC125Q86Z20 511 aa21.76■■□□□ 1.07
LINC01278-203ENST00000608788 MARF1Q9Y4F3 1742 aaKnown RBP21.75■■□□□ 1.07
LINC01278-203ENST00000608788 CDC42BPGQ6DT37 1551 aa21.74■■□□□ 1.07
LINC01278-203ENST00000608788 VGFO15240 615 aaPredicted RBP21.72■■□□□ 1.07
LINC01278-203ENST00000608788 ITGAEP38570 1179 aa21.72■■□□□ 1.07
LINC01278-203ENST00000608788 NPHP3Q7Z494 1330 aa21.72■■□□□ 1.07
LINC01278-203ENST00000608788 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.72■■□□□ 1.07
LINC01278-203ENST00000608788 GJD4Q96KN9 370 aaPredicted RBP21.71■■□□□ 1.07
LINC01278-203ENST00000608788 GLI3P10071 1580 aa21.69■■□□□ 1.06
LINC01278-203ENST00000608788 SLIT2O94813 1529 aa21.68■■□□□ 1.06
LINC01278-203ENST00000608788 PPLO60437 1756 aa21.67■■□□□ 1.06
LINC01278-203ENST00000608788 RPGRIP1LQ68CZ1 1315 aa21.67■■□□□ 1.06
LINC01278-203ENST00000608788 BLMP54132 1417 aaPredicted RBP21.66■■□□□ 1.06
LINC01278-203ENST00000608788 ESCO1Q5FWF5 840 aa21.66■■□□□ 1.06
LINC01278-203ENST00000608788 RALGAPBQ86X10 1494 aa21.65■■□□□ 1.06
LINC01278-203ENST00000608788 FOXO3O43524 673 aa21.65■■□□□ 1.06
LINC01278-203ENST00000608788 NAIPQ13075 1403 aa21.64■■□□□ 1.06
LINC01278-203ENST00000608788 TECPR2O15040 1411 aa21.63■■□□□ 1.05
LINC01278-203ENST00000608788 XPCQ01831 940 aaPredicted RBP21.63■■□□□ 1.05
LINC01278-203ENST00000608788 UNC5CLQ8IV45 518 aa21.62■■□□□ 1.05
LINC01278-203ENST00000608788 BRWD3Q6RI45 1802 aa21.61■■□□□ 1.05
LINC01278-203ENST00000608788 LRPPRCP42704 1394 aaKnown RBP21.61■■□□□ 1.05
LINC01278-203ENST00000608788 SPATA31A3Q5VYP0 1347 aa21.59■■□□□ 1.05
LINC01278-203ENST00000608788 LRP5O75197 1615 aa21.58■■□□□ 1.05
LINC01278-203ENST00000608788 USP32Q8NFA0 1604 aa21.58■■□□□ 1.05
LINC01278-203ENST00000608788 RNF39Q9H2S5 420 aa21.58■■□□□ 1.05
LINC01278-203ENST00000608788 DEFB132Q7Z7B7 95 aa21.57■■□□□ 1.04
LINC01278-203ENST00000608788 FMN2Q9NZ56 1722 aa21.55■■□□□ 1.04
LINC01278-203ENST00000608788 ONECUT3O60422 494 aaPredicted RBP21.55■■□□□ 1.04
LINC01278-203ENST00000608788 WAPLQ7Z5K2 1190 aa21.55■■□□□ 1.04
LINC01278-203ENST00000608788 ABCC11Q96J66 1382 aa21.55■■□□□ 1.04
LINC01278-203ENST00000608788 KIF1AQ12756 1690 aa21.55■■□□□ 1.04
LINC01278-203ENST00000608788 KNDC1Q76NI1 1749 aa21.55■■□□□ 1.04
LINC01278-203ENST00000608788 CCDC144AA2RUR9 1427 aa21.55■■□□□ 1.04
LINC01278-203ENST00000608788 ADGRF5Q8IZF2 1346 aa21.55■■□□□ 1.04
LINC01278-203ENST00000608788 PLEKHH1Q9ULM0 1364 aa21.54■■□□□ 1.04
LINC01278-203ENST00000608788 RRBP1Q9P2E9 1410 aaKnown RBP21.54■■□□□ 1.04
LINC01278-203ENST00000608788 NUTM2FA1L443 756 aa21.52■■□□□ 1.04
LINC01278-203ENST00000608788 SEPT12Q8IYM1 358 aa21.52■■□□□ 1.04
LINC01278-203ENST00000608788 VPS72Q15906 364 aa21.51■■□□□ 1.03
LINC01278-203ENST00000608788 NWD2Q9ULI1 1742 aa21.51■■□□□ 1.03
LINC01278-203ENST00000608788 IFT172Q9UG01 1749 aa21.5■■□□□ 1.03
LINC01278-203ENST00000608788 SPATA31E1Q6ZUB1 1445 aa21.5■■□□□ 1.03
LINC01278-203ENST00000608788 PLCH1Q4KWH8 1693 aa21.5■■□□□ 1.03
LINC01278-203ENST00000608788 TNS3Q68CZ2 1445 aa21.49■■□□□ 1.03
LINC01278-203ENST00000608788 PPARGC1BQ86YN6 1023 aaKnown RBP21.49■■□□□ 1.03
LINC01278-203ENST00000608788 STK26Q9P289 416 aa21.49■■□□□ 1.03
LINC01278-203ENST00000608788 KRT28Q7Z3Y7 464 aa21.48■■□□□ 1.03
LINC01278-203ENST00000608788 SLC4A1APQ9BWU0 796 aaKnown RBP21.48■■□□□ 1.03
LINC01278-203ENST00000608788 ABCA3Q99758 1704 aa21.48■■□□□ 1.03
LINC01278-203ENST00000608788 PIK3C2GO75747 1445 aa21.47■■□□□ 1.03
LINC01278-203ENST00000608788 ANKRD30BQ9BXX2 1392 aa21.46■■□□□ 1.03
LINC01278-203ENST00000608788 CACNB1Q02641 598 aaPredicted RBP21.45■■□□□ 1.02
LINC01278-203ENST00000608788 SF3B2Q13435 895 aaKnown RBP21.45■■□□□ 1.02
LINC01278-203ENST00000608788 TMEM132EQ6IEE7 984 aa21.45■■□□□ 1.02
LINC01278-203ENST00000608788 KRT27Q7Z3Y8 459 aa21.45■■□□□ 1.02
LINC01278-203ENST00000608788 YTHDC2Q9H6S0 1430 aaKnown RBP21.45■■□□□ 1.02
LINC01278-203ENST00000608788 RGPD8O14715 1765 aaPredicted RBP21.44■■□□□ 1.02
LINC01278-203ENST00000608788 CABLES1Q8TDN4 633 aa21.44■■□□□ 1.02
LINC01278-203ENST00000608788 SIRT1Q96EB6 747 aa21.44■■□□□ 1.02
LINC01278-203ENST00000608788 SBNO1A3KN83 1393 aa21.44■■□□□ 1.02
LINC01278-203ENST00000608788 NRXN1Q9ULB1 1477 aa21.43■■□□□ 1.02
LINC01278-203ENST00000608788 NRAPQ86VF7 1730 aa21.41■■□□□ 1.02
LINC01278-203ENST00000608788 HRCP23327 699 aa21.41■■□□□ 1.02
LINC01278-203ENST00000608788 PHF8Q9UPP1 1060 aa21.41■■□□□ 1.02
LINC01278-203ENST00000608788 FAM83GA6ND36 823 aa21.4■■□□□ 1.02
LINC01278-203ENST00000608788 ARHGEF10O15013 1369 aa21.39■■□□□ 1.02
LINC01278-203ENST00000608788 PSME1Q06323 249 aa21.39■■□□□ 1.01
LINC01278-203ENST00000608788 PSDA5PKW4 1024 aaPredicted RBP21.38■■□□□ 1.01
LINC01278-203ENST00000608788 RGL3Q3MIN7 710 aa21.38■■□□□ 1.01
LINC01278-203ENST00000608788 BAG6P46379 1132 aa21.36■■□□□ 1.01
LINC01278-203ENST00000608788 HAP1P54257 671 aaPredicted RBP21.36■■□□□ 1.01
LINC01278-203ENST00000608788 CCDC9Q9Y3X0 531 aaKnown RBP21.36■■□□□ 1.01
LINC01278-203ENST00000608788 DISP2A7MBM2 1401 aa21.35■■□□□ 1.01
LINC01278-203ENST00000608788 C14orf93Q9H972 538 aaKnown RBP21.34■■□□□ 1.01
LINC01278-203ENST00000608788 TRPM3Q9HCF6 1732 aaPredicted RBP21.34■■□□□ 1.01
LINC01278-203ENST00000608788 RGPD1P0DJD0 1748 aa21.33■■□□□ 1.01
LINC01278-203ENST00000608788 FAM98CQ17RN3 349 aaKnown RBP21.33■■□□□ 1.01
LINC01278-203ENST00000608788 ANKARQ7Z5J8 1434 aa21.32■■□□□ 1
LINC01278-203ENST00000608788 ALS2Q96Q42 1657 aa21.31■■□□□ 1
LINC01278-203ENST00000608788 THSD7AQ9UPZ6 1657 aa21.31■■□□□ 1
LINC01278-203ENST00000608788 TNS1Q9HBL0 1735 aaKnown RBP21.31■■□□□ 1
LINC01278-203ENST00000608788 ADGRB2O60241 1585 aa21.31■■□□□ 1
LINC01278-203ENST00000608788 COL14A1Q05707 1796 aaKnown RBP21.31■■□□□ 1
LINC01278-203ENST00000608788 PLEKHG5O94827 1062 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms