RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 IFT172Q9UG01 1749 aa18.89■□□□□ 0.62
CTCFL-219ENST00000608720 NSD3Q9BZ95 1437 aa18.89■□□□□ 0.62
CTCFL-219ENST00000608720 IGHDP01880 384 aa18.89■□□□□ 0.61
CTCFL-219ENST00000608720 ADGRB3O60242 1522 aa18.89■□□□□ 0.61
CTCFL-219ENST00000608720 CHGAP10645 457 aaKnown RBP18.88■□□□□ 0.61
CTCFL-219ENST00000608720 CANXP27824 592 aaKnown RBP18.88■□□□□ 0.61
CTCFL-219ENST00000608720 AAMPQ13685 434 aa18.88■□□□□ 0.61
CTCFL-219ENST00000608720 CLUAP1Q96AJ1 413 aa18.88■□□□□ 0.61
CTCFL-219ENST00000608720 TRAK1Q9UPV9 953 aa18.88■□□□□ 0.61
CTCFL-219ENST00000608720 RPGRIP1LQ68CZ1 1315 aa18.88■□□□□ 0.61
CTCFL-219ENST00000608720 SLC4A3P48751 1232 aa18.88■□□□□ 0.61
CTCFL-219ENST00000608720 NFKBIBQ15653 356 aa18.88■□□□□ 0.61
CTCFL-219ENST00000608720 PPRC1Q5VV67 1664 aaKnown RBP18.87■□□□□ 0.61
CTCFL-219ENST00000608720 WDR63Q8IWG1 891 aa18.87■□□□□ 0.61
CTCFL-219ENST00000608720 SLC12A5Q9H2X9 1139 aa18.86■□□□□ 0.61
CTCFL-219ENST00000608720 MAPK8IP3Q9UPT6 1336 aa18.86■□□□□ 0.61
CTCFL-219ENST00000608720 PUS7Q96PZ0 661 aaKnown RBP18.86■□□□□ 0.61
CTCFL-219ENST00000608720 PHF23Q9BUL5 403 aaPredicted RBP18.86■□□□□ 0.61
CTCFL-219ENST00000608720 ZNF518AQ6AHZ1 1483 aa18.86■□□□□ 0.61
CTCFL-219ENST00000608720 MROH2AA6NES4 1674 aa18.85■□□□□ 0.61
CTCFL-219ENST00000608720 NCBP3Q53F19 620 aaKnown RBP18.85■□□□□ 0.61
CTCFL-219ENST00000608720 TCP11L2Q8N4U5 519 aa18.84■□□□□ 0.61
CTCFL-219ENST00000608720 PANK1Q8TE04 598 aa18.84■□□□□ 0.61
CTCFL-219ENST00000608720 CFAP53Q96M91 514 aa18.84■□□□□ 0.61
CTCFL-219ENST00000608720 RSPH6AQ9H0K4 717 aa18.84■□□□□ 0.61
CTCFL-219ENST00000608720 COG6Q9Y2V7 657 aa18.84■□□□□ 0.61
CTCFL-219ENST00000608720 KIDINS220Q9ULH0 1771 aa18.84■□□□□ 0.61
CTCFL-219ENST00000608720 RARSP54136 660 aaKnown RBP18.84■□□□□ 0.61
CTCFL-219ENST00000608720 CCDC27Q2M243 656 aa18.84■□□□□ 0.61
CTCFL-219ENST00000608720 TNNT2P45379 298 aaPredicted RBP18.82■□□□□ 0.6
CTCFL-219ENST00000608720 PMFBP1Q8TBY8 1022 aa18.82■□□□□ 0.6
CTCFL-219ENST00000608720 NPATQ14207 1427 aa18.82■□□□□ 0.6
CTCFL-219ENST00000608720 MTHFSP49914 203 aa18.81■□□□□ 0.6
CTCFL-219ENST00000608720 NEUROD2Q15784 382 aa18.81■□□□□ 0.6
CTCFL-219ENST00000608720 FRAT1Q92837 279 aaPredicted RBP18.81■□□□□ 0.6
CTCFL-219ENST00000608720 BRPF3Q9ULD4 1205 aa18.81■□□□□ 0.6
CTCFL-219ENST00000608720 ADGRB1O14514 1584 aa18.81■□□□□ 0.6
CTCFL-219ENST00000608720 IQSEC2Q5JU85 1478 aa18.8■□□□□ 0.6
CTCFL-219ENST00000608720 RRP7AQ9Y3A4 280 aaKnown RBP18.8■□□□□ 0.6
CTCFL-219ENST00000608720 TSPOAP1O95153 1857 aa18.8■□□□□ 0.6
CTCFL-219ENST00000608720 TMEM132EQ6IEE7 984 aa18.8■□□□□ 0.6
CTCFL-219ENST00000608720 SHPRHQ149N8 1683 aa18.79■□□□□ 0.6
CTCFL-219ENST00000608720 USP32Q8NFA0 1604 aa18.78■□□□□ 0.6
CTCFL-219ENST00000608720 GGT6Q6P531 493 aa18.78■□□□□ 0.6
CTCFL-219ENST00000608720 FAM43AQ8N2R8 423 aa18.78■□□□□ 0.6
CTCFL-219ENST00000608720 NSD2O96028 1365 aa18.78■□□□□ 0.6
CTCFL-219ENST00000608720 EVC2Q86UK5 1308 aa18.78■□□□□ 0.6
CTCFL-219ENST00000608720 MYH16Q9H6N6 1097 aa18.78■□□□□ 0.6
CTCFL-219ENST00000608720 MLH3Q9UHC1 1453 aa18.77■□□□□ 0.6
CTCFL-219ENST00000608720 USP19O94966 1318 aa18.76■□□□□ 0.59
CTCFL-219ENST00000608720 ZMYM3Q14202 1370 aa18.76■□□□□ 0.59
CTCFL-219ENST00000608720 QRICH2Q9H0J4 1663 aa18.76■□□□□ 0.59
CTCFL-219ENST00000608720 KIF13AQ9H1H9 1805 aa18.76■□□□□ 0.59
CTCFL-219ENST00000608720 ANKRD36BQ8N2N9 1353 aa18.76■□□□□ 0.59
CTCFL-219ENST00000608720 ZC3H13Q5T200 1668 aaKnown RBP18.76■□□□□ 0.59
CTCFL-219ENST00000608720 VGFO15240 615 aaPredicted RBP18.76■□□□□ 0.59
CTCFL-219ENST00000608720 PPLO60437 1756 aa18.75■□□□□ 0.59
CTCFL-219ENST00000608720 POGZQ7Z3K3 1410 aa18.75■□□□□ 0.59
CTCFL-219ENST00000608720 DIP2BQ9P265 1576 aa18.74■□□□□ 0.59
CTCFL-219ENST00000608720 BECN1Q14457 450 aa18.73■□□□□ 0.59
CTCFL-219ENST00000608720 RWDD1Q9H446 243 aaPredicted RBP18.73■□□□□ 0.59
CTCFL-219ENST00000608720 PCDHB15Q9Y5E8 787 aa18.73■□□□□ 0.59
CTCFL-219ENST00000608720 CT47B1P0C2W7 299 aaPredicted RBP18.73■□□□□ 0.59
CTCFL-219ENST00000608720 U2AF1L5P0DN76 240 aaPredicted RBP18.72■□□□□ 0.59
CTCFL-219ENST00000608720 RLBP1P12271 317 aa18.72■□□□□ 0.59
CTCFL-219ENST00000608720 U2AF1Q01081 240 aaKnown RBP eCLIP18.72■□□□□ 0.59
CTCFL-219ENST00000608720 CD109Q6YHK3 1445 aa18.72■□□□□ 0.59
CTCFL-219ENST00000608720 FRMPD1Q5SYB0 1578 aa18.72■□□□□ 0.59
CTCFL-219ENST00000608720 ABCC3O15438 1527 aa18.7■□□□□ 0.58
CTCFL-219ENST00000608720 SEC24BO95487 1268 aa18.7■□□□□ 0.58
CTCFL-219ENST00000608720 FRAT2O75474 233 aaPredicted RBP18.7■□□□□ 0.58
CTCFL-219ENST00000608720 CFAP74Q9C0B2 1584 aa18.69■□□□□ 0.58
CTCFL-219ENST00000608720 HECW2Q9P2P5 1572 aa18.69■□□□□ 0.58
CTCFL-219ENST00000608720 UPF2Q9HAU5 1272 aaKnown RBP18.69■□□□□ 0.58
CTCFL-219ENST00000608720 PDZRN3Q9UPQ7 1066 aa18.69■□□□□ 0.58
CTCFL-219ENST00000608720 BCL2L13Q9BXK5 485 aa18.69■□□□□ 0.58
CTCFL-219ENST00000608720 EIF5BO60841 1220 aaKnown RBP18.68■□□□□ 0.58
CTCFL-219ENST00000608720 MVPQ14764 893 aaKnown RBP18.68■□□□□ 0.58
CTCFL-219ENST00000608720 ZKSCAN2Q63HK3 967 aa18.68■□□□□ 0.58
CTCFL-219ENST00000608720 TNNQ9UQP3 1299 aa18.68■□□□□ 0.58
CTCFL-219ENST00000608720 GLI2P10070 1586 aa18.68■□□□□ 0.58
CTCFL-219ENST00000608720 TULP4Q9NRJ4 1543 aa18.68■□□□□ 0.58
CTCFL-219ENST00000608720 CABP2Q9NPB3 220 aa18.67■□□□□ 0.58
CTCFL-219ENST00000608720 VIRMAQ69YN4 1812 aaKnown RBP18.66■□□□□ 0.58
CTCFL-219ENST00000608720 DZIP1LQ8IYY4 767 aaKnown RBP18.66■□□□□ 0.58
CTCFL-219ENST00000608720 NUTM2DQ5VT03 806 aaPredicted RBP18.65■□□□□ 0.58
CTCFL-219ENST00000608720 ZFYVE9O95405 1425 aa18.64■□□□□ 0.57
CTCFL-219ENST00000608720 FTSJ3Q8IY81 847 aaKnown RBP18.64■□□□□ 0.57
CTCFL-219ENST00000608720 TBC1D32Q96NH3 1257 aa18.64■□□□□ 0.57
CTCFL-219ENST00000608720 ABCC11Q96J66 1382 aa18.64■□□□□ 0.57
CTCFL-219ENST00000608720 NLRP1Q9C000 1473 aa18.64■□□□□ 0.57
CTCFL-219ENST00000608720 ADGRB2O60241 1585 aa18.64■□□□□ 0.57
CTCFL-219ENST00000608720 NEXMIFQ5QGS0 1516 aa18.64■□□□□ 0.57
CTCFL-219ENST00000608720 PLEKHF1Q96S99 279 aa18.64■□□□□ 0.57
CTCFL-219ENST00000608720 ARHGAP31Q2M1Z3 1444 aa18.63■□□□□ 0.57
CTCFL-219ENST00000608720 PIK3C2BO00750 1634 aa18.62■□□□□ 0.57
CTCFL-219ENST00000608720 CAMSAP1Q5T5Y3 1602 aa18.62■□□□□ 0.57
CTCFL-219ENST00000608720 TMPOP42166 694 aaKnown RBP18.62■□□□□ 0.57
CTCFL-219ENST00000608720 SLC52A1Q9NWF4 448 aa18.62■□□□□ 0.57
CTCFL-219ENST00000608720 IL16Q14005 1332 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms