RNA–Protein interactions for RNA: ENST00000608669.1

LINC00963-212, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 531 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-212ENST00000608669 CLSPNQ9HAW4 1339 aa17.47■□□□□ 0.39
LINC00963-212ENST00000608669 DLC1Q96QB1 1528 aa17.47■□□□□ 0.39
LINC00963-212ENST00000608669 POGKQ9P215 609 aa17.47■□□□□ 0.39
LINC00963-212ENST00000608669 RGPD8O14715 1765 aaPredicted RBP17.45■□□□□ 0.38
LINC00963-212ENST00000608669 STAC3Q96MF2 364 aa17.45■□□□□ 0.38
LINC00963-212ENST00000608669 FMN2Q9NZ56 1722 aa17.44■□□□□ 0.38
LINC00963-212ENST00000608669 TOM1O60784 492 aa17.44■□□□□ 0.38
LINC00963-212ENST00000608669 ATF3P18847 181 aa17.44■□□□□ 0.38
LINC00963-212ENST00000608669 MST1RQ04912 1400 aa17.44■□□□□ 0.38
LINC00963-212ENST00000608669 FAM135BQ49AJ0 1406 aa17.44■□□□□ 0.38
LINC00963-212ENST00000608669 CDC42BPGQ6DT37 1551 aa17.44■□□□□ 0.38
LINC00963-212ENST00000608669 C19orf44Q9H6X5 657 aa17.43■□□□□ 0.38
LINC00963-212ENST00000608669 DDX17Q92841 729 aaKnown RBP17.42■□□□□ 0.38
LINC00963-212ENST00000608669 NCOA3Q9Y6Q9 1424 aa17.41■□□□□ 0.38
LINC00963-212ENST00000608669 USP32Q8NFA0 1604 aa17.41■□□□□ 0.38
LINC00963-212ENST00000608669 CARD11Q9BXL7 1154 aa17.41■□□□□ 0.38
LINC00963-212ENST00000608669 SLAIN2Q9P270 581 aa17.4■□□□□ 0.38
LINC00963-212ENST00000608669 ADGRB2O60241 1585 aa17.4■□□□□ 0.38
LINC00963-212ENST00000608669 DCCP43146 1447 aa17.39■□□□□ 0.38
LINC00963-212ENST00000608669 HSPA1LP34931 641 aa17.39■□□□□ 0.37
LINC00963-212ENST00000608669 C1orf167Q5SNV9 1468 aa17.38■□□□□ 0.37
LINC00963-212ENST00000608669 CADPS2Q86UW7 1296 aa17.38■□□□□ 0.37
LINC00963-212ENST00000608669 GPRASP1Q5JY77 1395 aa17.38■□□□□ 0.37
LINC00963-212ENST00000608669 PHLPP1O60346 1717 aa17.38■□□□□ 0.37
LINC00963-212ENST00000608669 TULP4Q9NRJ4 1543 aa17.37■□□□□ 0.37
LINC00963-212ENST00000608669 ORAI2Q96SN7 254 aa17.37■□□□□ 0.37
LINC00963-212ENST00000608669 CENPJQ9HC77 1338 aaPredicted RBP17.36■□□□□ 0.37
LINC00963-212ENST00000608669 BRINP3Q76B58 766 aa17.35■□□□□ 0.37
LINC00963-212ENST00000608669 XPCQ01831 940 aaPredicted RBP17.34■□□□□ 0.37
LINC00963-212ENST00000608669 PRR36Q9H6K5 1346 aa17.34■□□□□ 0.37
LINC00963-212ENST00000608669 NHSL1Q5SYE7 1610 aa17.33■□□□□ 0.37
LINC00963-212ENST00000608669 SIRT1Q96EB6 747 aa17.33■□□□□ 0.36
LINC00963-212ENST00000608669 USP47Q96K76 1375 aa17.32■□□□□ 0.36
LINC00963-212ENST00000608669 ESCO1Q5FWF5 840 aa17.32■□□□□ 0.36
LINC00963-212ENST00000608669 COL16A1Q07092 1604 aaPredicted RBP17.32■□□□□ 0.36
LINC00963-212ENST00000608669 CABP2Q9NPB3 220 aa17.31■□□□□ 0.36
LINC00963-212ENST00000608669 ATP7BP35670 1465 aa17.31■□□□□ 0.36
LINC00963-212ENST00000608669 EIF3AQ14152 1382 aaKnown RBP17.3■□□□□ 0.36
LINC00963-212ENST00000608669 TOPAZ1Q8N9V7 1692 aa17.3■□□□□ 0.36
LINC00963-212ENST00000608669 WASLO00401 505 aaPredicted RBP17.3■□□□□ 0.36
LINC00963-212ENST00000608669 PMFBP1Q8TBY8 1022 aa17.3■□□□□ 0.36
LINC00963-212ENST00000608669 CDK19Q9BWU1 502 aa17.3■□□□□ 0.36
LINC00963-212ENST00000608669 AHDC1Q5TGY3 1603 aaPredicted RBP17.29■□□□□ 0.36
LINC00963-212ENST00000608669 TIMELESSQ9UNS1 1208 aa17.29■□□□□ 0.36
LINC00963-212ENST00000608669 ST20-MTHFSA0A0A6YYL1 179 aa17.28■□□□□ 0.36
LINC00963-212ENST00000608669 SRPK2P78362 688 aaKnown RBP17.28■□□□□ 0.36
LINC00963-212ENST00000608669 ITSN1Q15811 1721 aa17.27■□□□□ 0.36
LINC00963-212ENST00000608669 PLEKHG5O94827 1062 aa17.27■□□□□ 0.36
LINC00963-212ENST00000608669 KIF1AQ12756 1690 aa17.26■□□□□ 0.35
LINC00963-212ENST00000608669 FOXO3O43524 673 aa17.26■□□□□ 0.35
LINC00963-212ENST00000608669 NUDT16Q96DE0 195 aaKnown RBP17.24■□□□□ 0.35
LINC00963-212ENST00000608669 DISP3Q9P2K9 1392 aa17.24■□□□□ 0.35
LINC00963-212ENST00000608669 ANKARQ7Z5J8 1434 aa17.23■□□□□ 0.35
LINC00963-212ENST00000608669 PHF8Q9UPP1 1060 aa17.23■□□□□ 0.35
LINC00963-212ENST00000608669 PXDNQ92626 1479 aa17.23■□□□□ 0.35
LINC00963-212ENST00000608669 TESK2Q96S53 571 aa17.22■□□□□ 0.35
LINC00963-212ENST00000608669 PPIP5K1Q6PFW1 1433 aa17.21■□□□□ 0.35
LINC00963-212ENST00000608669 HSPA5P11021 654 aaKnown RBP17.21■□□□□ 0.35
LINC00963-212ENST00000608669 EVC2Q86UK5 1308 aa17.21■□□□□ 0.34
LINC00963-212ENST00000608669 POLR3GLQ9BT43 218 aa17.19■□□□□ 0.34
LINC00963-212ENST00000608669 TRPM3Q9HCF6 1732 aaPredicted RBP17.18■□□□□ 0.34
LINC00963-212ENST00000608669 SHPRHQ149N8 1683 aa17.17■□□□□ 0.34
LINC00963-212ENST00000608669 NGDNQ8NEJ9 315 aaKnown RBP17.17■□□□□ 0.34
LINC00963-212ENST00000608669 NPHP3Q7Z494 1330 aa17.17■□□□□ 0.34
LINC00963-212ENST00000608669 SBNO2Q9Y2G9 1366 aa17.16■□□□□ 0.34
LINC00963-212ENST00000608669 MED1Q15648 1581 aaPredicted RBP17.16■□□□□ 0.34
LINC00963-212ENST00000608669 KRT28Q7Z3Y7 464 aa17.16■□□□□ 0.34
LINC00963-212ENST00000608669 CABP1Q9NZU7 370 aa17.16■□□□□ 0.34
LINC00963-212ENST00000608669 LRP6O75581 1613 aa17.16■□□□□ 0.34
LINC00963-212ENST00000608669 ACEP12821 1306 aa17.16■□□□□ 0.34
LINC00963-212ENST00000608669 NUTM2BA6NNL0 878 aaPredicted RBP17.15■□□□□ 0.34
LINC00963-212ENST00000608669 NUTM2EB1AL46 878 aaPredicted RBP17.15■□□□□ 0.34
LINC00963-212ENST00000608669 LMOD2Q6P5Q4 547 aa17.15■□□□□ 0.34
LINC00963-212ENST00000608669 NUTM2AQ8IVF1 878 aaPredicted RBP17.15■□□□□ 0.34
LINC00963-212ENST00000608669 MYOM1P52179 1685 aa17.15■□□□□ 0.34
LINC00963-212ENST00000608669 SOS2Q07890 1332 aaPredicted RBP17.15■□□□□ 0.34
LINC00963-212ENST00000608669 AKAP12Q02952 1782 aa17.15■□□□□ 0.34
LINC00963-212ENST00000608669 EIF4G2P78344 907 aaKnown RBP eCLIP17.14■□□□□ 0.33
LINC00963-212ENST00000608669 TMC1Q8TDI8 760 aa17.14■□□□□ 0.33
LINC00963-212ENST00000608669 PNPLA6Q8IY17 1366 aa17.14■□□□□ 0.33
LINC00963-212ENST00000608669 PAK3O75914 559 aaPredicted RBP17.13■□□□□ 0.33
LINC00963-212ENST00000608669 PSME1Q06323 249 aa17.13■□□□□ 0.33
LINC00963-212ENST00000608669 NUTM2GQ5VZR2 741 aa17.13■□□□□ 0.33
LINC00963-212ENST00000608669 CCDC61Q9Y6R9 512 aa17.13■□□□□ 0.33
LINC00963-212ENST00000608669 ABCA3Q99758 1704 aa17.13■□□□□ 0.33
LINC00963-212ENST00000608669 ALS2Q96Q42 1657 aa17.12■□□□□ 0.33
LINC00963-212ENST00000608669 JCADQ9P266 1359 aa17.12■□□□□ 0.33
LINC00963-212ENST00000608669 TNS3Q68CZ2 1445 aa17.12■□□□□ 0.33
LINC00963-212ENST00000608669 CABLES1Q8TDN4 633 aa17.11■□□□□ 0.33
LINC00963-212ENST00000608669 SLC12A5Q9H2X9 1139 aa17.11■□□□□ 0.33
LINC00963-212ENST00000608669 CD163L1Q9NR16 1453 aa17.11■□□□□ 0.33
LINC00963-212ENST00000608669 NRKQ7Z2Y5 1582 aa17.11■□□□□ 0.33
LINC00963-212ENST00000608669 MON2Q7Z3U7 1717 aa17.1■□□□□ 0.33
LINC00963-212ENST00000608669 C11orf95C9JLR9 678 aaPredicted RBP17.1■□□□□ 0.33
LINC00963-212ENST00000608669 TMF1P82094 1093 aa17.1■□□□□ 0.33
LINC00963-212ENST00000608669 POLR3AO14802 1390 aaPredicted RBP17.1■□□□□ 0.33
LINC00963-212ENST00000608669 ATAD2Q6PL18 1390 aa17.1■□□□□ 0.33
LINC00963-212ENST00000608669 LRRC59Q96AG4 307 aaKnown RBP17.09■□□□□ 0.33
LINC00963-212ENST00000608669 COL22A1Q8NFW1 1626 aaPredicted RBP17.09■□□□□ 0.33
LINC00963-212ENST00000608669 SPATA31A3Q5VYP0 1347 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms