RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 TMEM132EQ6IEE7 984 aa19.92■□□□□ 0.78
POLR2J3-219ENST00000608621 WAPLQ7Z5K2 1190 aa19.92■□□□□ 0.78
POLR2J3-219ENST00000608621 ANKRD30BQ9BXX2 1392 aa19.92■□□□□ 0.78
POLR2J3-219ENST00000608621 NGLY1Q96IV0 654 aa19.91■□□□□ 0.78
POLR2J3-219ENST00000608621 LAMC1P11047 1609 aa19.89■□□□□ 0.77
POLR2J3-219ENST00000608621 LRPPRCP42704 1394 aaKnown RBP19.88■□□□□ 0.77
POLR2J3-219ENST00000608621 NUTM2FA1L443 756 aa19.88■□□□□ 0.77
POLR2J3-219ENST00000608621 RBM6P78332 1123 aaKnown RBP19.88■□□□□ 0.77
POLR2J3-219ENST00000608621 ABCC11Q96J66 1382 aa19.87■□□□□ 0.77
POLR2J3-219ENST00000608621 CDK12Q9NYV4 1490 aaPredicted RBP19.86■□□□□ 0.77
POLR2J3-219ENST00000608621 NPHP3Q7Z494 1330 aa19.86■□□□□ 0.77
POLR2J3-219ENST00000608621 ACIN1Q9UKV3 1341 aaKnown RBP19.86■□□□□ 0.77
POLR2J3-219ENST00000608621 FOXO3O43524 673 aa19.86■□□□□ 0.77
POLR2J3-219ENST00000608621 IFT172Q9UG01 1749 aa19.85■□□□□ 0.77
POLR2J3-219ENST00000608621 TECPR2O15040 1411 aa19.85■□□□□ 0.77
POLR2J3-219ENST00000608621 PLEKHH1Q9ULM0 1364 aa19.84■□□□□ 0.77
POLR2J3-219ENST00000608621 XPCQ01831 940 aaPredicted RBP19.84■□□□□ 0.77
POLR2J3-219ENST00000608621 PIK3C2GO75747 1445 aa19.84■□□□□ 0.77
POLR2J3-219ENST00000608621 CDC42BPGQ6DT37 1551 aa19.83■□□□□ 0.77
POLR2J3-219ENST00000608621 C14orf93Q9H972 538 aaKnown RBP19.83■□□□□ 0.77
POLR2J3-219ENST00000608621 USP21Q9UK80 565 aa19.83■□□□□ 0.77
POLR2J3-219ENST00000608621 YTHDC2Q9H6S0 1430 aaKnown RBP19.82■□□□□ 0.76
POLR2J3-219ENST00000608621 CFAP70Q5T0N1 1121 aa19.81■□□□□ 0.76
POLR2J3-219ENST00000608621 FNBP4Q8N3X1 1017 aaPredicted RBP19.81■□□□□ 0.76
POLR2J3-219ENST00000608621 SIRT1Q96EB6 747 aa19.81■□□□□ 0.76
POLR2J3-219ENST00000608621 RGS12O14924 1447 aa19.79■□□□□ 0.76
POLR2J3-219ENST00000608621 TRPC5Q9UL62 973 aaPredicted RBP19.79■□□□□ 0.76
POLR2J3-219ENST00000608621 PXDNQ92626 1479 aa19.79■□□□□ 0.76
POLR2J3-219ENST00000608621 DHX57Q6P158 1386 aaKnown RBP19.78■□□□□ 0.76
POLR2J3-219ENST00000608621 COL22A1Q8NFW1 1626 aaPredicted RBP19.77■□□□□ 0.76
POLR2J3-219ENST00000608621 KNDC1Q76NI1 1749 aa19.77■□□□□ 0.76
POLR2J3-219ENST00000608621 RAB3GAP2Q9H2M9 1393 aa19.77■□□□□ 0.76
POLR2J3-219ENST00000608621 MYOM2P54296 1465 aa19.75■□□□□ 0.75
POLR2J3-219ENST00000608621 KRT28Q7Z3Y7 464 aa19.75■□□□□ 0.75
POLR2J3-219ENST00000608621 NRXN1Q9ULB1 1477 aa19.74■□□□□ 0.75
POLR2J3-219ENST00000608621 SAFB2Q14151 953 aaKnown RBP eCLIP19.74■□□□□ 0.75
POLR2J3-219ENST00000608621 FMN2Q9NZ56 1722 aa19.73■□□□□ 0.75
POLR2J3-219ENST00000608621 PRAM1Q96QH2 718 aa19.73■□□□□ 0.75
POLR2J3-219ENST00000608621 SPATA31A3Q5VYP0 1347 aa19.73■□□□□ 0.75
POLR2J3-219ENST00000608621 ATRNO75882 1429 aa19.72■□□□□ 0.75
POLR2J3-219ENST00000608621 PHF8Q9UPP1 1060 aa19.72■□□□□ 0.75
POLR2J3-219ENST00000608621 POGKQ9P215 609 aa19.71■□□□□ 0.75
POLR2J3-219ENST00000608621 KDM2AQ9Y2K7 1162 aa19.7■□□□□ 0.74
POLR2J3-219ENST00000608621 BCL9LQ86UU0 1499 aa19.7■□□□□ 0.74
POLR2J3-219ENST00000608621 PSME1Q06323 249 aa19.69■□□□□ 0.74
POLR2J3-219ENST00000608621 RGPD8O14715 1765 aaPredicted RBP19.68■□□□□ 0.74
POLR2J3-219ENST00000608621 GJD4Q96KN9 370 aaPredicted RBP19.68■□□□□ 0.74
POLR2J3-219ENST00000608621 MARF1Q9Y4F3 1742 aaKnown RBP19.68■□□□□ 0.74
POLR2J3-219ENST00000608621 DCAF11Q8TEB1 546 aa19.67■□□□□ 0.74
POLR2J3-219ENST00000608621 TRAK1Q9UPV9 953 aa19.67■□□□□ 0.74
POLR2J3-219ENST00000608621 KIF1AQ12756 1690 aa19.67■□□□□ 0.74
POLR2J3-219ENST00000608621 ATAD2Q6PL18 1390 aa19.67■□□□□ 0.74
POLR2J3-219ENST00000608621 PLEKHG5O94827 1062 aa19.65■□□□□ 0.74
POLR2J3-219ENST00000608621 HAP1P54257 671 aaPredicted RBP19.65■□□□□ 0.74
POLR2J3-219ENST00000608621 LMOD2Q6P5Q4 547 aa19.65■□□□□ 0.74
POLR2J3-219ENST00000608621 UNC5CLQ8IV45 518 aa19.65■□□□□ 0.74
POLR2J3-219ENST00000608621 PMFBP1Q8TBY8 1022 aa19.65■□□□□ 0.74
POLR2J3-219ENST00000608621 CABLES1Q8TDN4 633 aa19.65■□□□□ 0.74
POLR2J3-219ENST00000608621 HRCP23327 699 aa19.64■□□□□ 0.73
POLR2J3-219ENST00000608621 DLC1Q96QB1 1528 aa19.63■□□□□ 0.73
POLR2J3-219ENST00000608621 HIRIP3Q9BW71 556 aaPredicted RBP19.63■□□□□ 0.73
POLR2J3-219ENST00000608621 TNS3Q68CZ2 1445 aa19.62■□□□□ 0.73
POLR2J3-219ENST00000608621 SLIT2O94813 1529 aa19.61■□□□□ 0.73
POLR2J3-219ENST00000608621 SBNO1A3KN83 1393 aa19.61■□□□□ 0.73
POLR2J3-219ENST00000608621 MINK1Q8N4C8 1332 aaPredicted RBP19.61■□□□□ 0.73
POLR2J3-219ENST00000608621 STAC3Q96MF2 364 aa19.61■□□□□ 0.73
POLR2J3-219ENST00000608621 ADGRB1O14514 1584 aa19.61■□□□□ 0.73
POLR2J3-219ENST00000608621 ANKARQ7Z5J8 1434 aa19.59■□□□□ 0.73
POLR2J3-219ENST00000608621 USP32Q8NFA0 1604 aa19.58■□□□□ 0.72
POLR2J3-219ENST00000608621 RALGAPBQ86X10 1494 aa19.57■□□□□ 0.72
POLR2J3-219ENST00000608621 WASLO00401 505 aaPredicted RBP19.57■□□□□ 0.72
POLR2J3-219ENST00000608621 ARHGEF10O15013 1369 aa19.57■□□□□ 0.72
POLR2J3-219ENST00000608621 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.56■□□□□ 0.72
POLR2J3-219ENST00000608621 PRR36Q9H6K5 1346 aa19.56■□□□□ 0.72
POLR2J3-219ENST00000608621 CCDC125Q86Z20 511 aa19.56■□□□□ 0.72
POLR2J3-219ENST00000608621 FAM83GA6ND36 823 aa19.55■□□□□ 0.72
POLR2J3-219ENST00000608621 GLI3P10071 1580 aa19.55■□□□□ 0.72
POLR2J3-219ENST00000608621 VPS72Q15906 364 aa19.55■□□□□ 0.72
POLR2J3-219ENST00000608621 ADGRB2O60241 1585 aa19.54■□□□□ 0.72
POLR2J3-219ENST00000608621 CCDC9Q9Y3X0 531 aaKnown RBP19.54■□□□□ 0.72
POLR2J3-219ENST00000608621 GPRASP1Q5JY77 1395 aa19.54■□□□□ 0.72
POLR2J3-219ENST00000608621 SEPT12Q8IYM1 358 aa19.53■□□□□ 0.72
POLR2J3-219ENST00000608621 NGDNQ8NEJ9 315 aaKnown RBP19.53■□□□□ 0.72
POLR2J3-219ENST00000608621 EIF3AQ14152 1382 aaKnown RBP19.53■□□□□ 0.72
POLR2J3-219ENST00000608621 ONECUT3O60422 494 aaPredicted RBP19.5■□□□□ 0.71
POLR2J3-219ENST00000608621 PAK3O75914 559 aaPredicted RBP19.5■□□□□ 0.71
POLR2J3-219ENST00000608621 ZRANB1Q9UGI0 708 aa19.5■□□□□ 0.71
POLR2J3-219ENST00000608621 TULP4Q9NRJ4 1543 aa19.5■□□□□ 0.71
POLR2J3-219ENST00000608621 NUDT16Q96DE0 195 aaKnown RBP19.49■□□□□ 0.71
POLR2J3-219ENST00000608621 ABCA3Q99758 1704 aa19.48■□□□□ 0.71
POLR2J3-219ENST00000608621 TRPM3Q9HCF6 1732 aaPredicted RBP19.48■□□□□ 0.71
POLR2J3-219ENST00000608621 BTG4Q9NY30 223 aa19.48■□□□□ 0.71
POLR2J3-219ENST00000608621 PLCH1Q4KWH8 1693 aa19.48■□□□□ 0.71
POLR2J3-219ENST00000608621 NWD2Q9ULI1 1742 aa19.48■□□□□ 0.71
POLR2J3-219ENST00000608621 BRWD3Q6RI45 1802 aa19.47■□□□□ 0.71
POLR2J3-219ENST00000608621 CDK19Q9BWU1 502 aa19.47■□□□□ 0.71
POLR2J3-219ENST00000608621 EP400Q96L91 3159 aa19.46■□□□□ 0.71
POLR2J3-219ENST00000608621 ALS2Q96Q42 1657 aa19.46■□□□□ 0.71
POLR2J3-219ENST00000608621 KRT27Q7Z3Y8 459 aa19.45■□□□□ 0.7
POLR2J3-219ENST00000608621 BLMP54132 1417 aaPredicted RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms