RNA–Protein interactions for RNA: ENST00000608484.1

AP004247.4-201, humanhuman

BASIC

Gene AP004247.4, Length 942 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004247.4-201ENST00000608484 ROBO2Q9HCK4 1378 aa12.25□□□□□ -0.45
AP004247.4-201ENST00000608484 CLTCL1P53675 1640 aa12.25□□□□□ -0.45
AP004247.4-201ENST00000608484 MYOM2P54296 1465 aa12.24□□□□□ -0.45
AP004247.4-201ENST00000608484 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.22□□□□□ -0.45
AP004247.4-201ENST00000608484 PRAG1Q86YV5 1406 aa12.21□□□□□ -0.45
AP004247.4-201ENST00000608484 ESCO1Q5FWF5 840 aa12.21□□□□□ -0.45
AP004247.4-201ENST00000608484 PXDNQ92626 1479 aa12.21□□□□□ -0.46
AP004247.4-201ENST00000608484 NPHP3Q7Z494 1330 aa12.2□□□□□ -0.46
AP004247.4-201ENST00000608484 VGFO15240 615 aaPredicted RBP12.2□□□□□ -0.46
AP004247.4-201ENST00000608484 FOXO3O43524 673 aa12.2□□□□□ -0.46
AP004247.4-201ENST00000608484 DEFB132Q7Z7B7 95 aa12.2□□□□□ -0.46
AP004247.4-201ENST00000608484 GLI3P10071 1580 aa12.2□□□□□ -0.46
AP004247.4-201ENST00000608484 BLMP54132 1417 aaPredicted RBP12.2□□□□□ -0.46
AP004247.4-201ENST00000608484 ITGAEP38570 1179 aa12.19□□□□□ -0.46
AP004247.4-201ENST00000608484 UNC5CLQ8IV45 518 aa12.19□□□□□ -0.46
AP004247.4-201ENST00000608484 HFM1A2PYH4 1435 aa12.19□□□□□ -0.46
AP004247.4-201ENST00000608484 SLIT2O94813 1529 aa12.18□□□□□ -0.46
AP004247.4-201ENST00000608484 XPCQ01831 940 aaPredicted RBP12.18□□□□□ -0.46
AP004247.4-201ENST00000608484 RALGAPBQ86X10 1494 aa12.18□□□□□ -0.46
AP004247.4-201ENST00000608484 PPLO60437 1756 aa12.17□□□□□ -0.46
AP004247.4-201ENST00000608484 LRP5O75197 1615 aa12.16□□□□□ -0.46
AP004247.4-201ENST00000608484 ONECUT3O60422 494 aaPredicted RBP12.16□□□□□ -0.46
AP004247.4-201ENST00000608484 CDC42BPGQ6DT37 1551 aa12.16□□□□□ -0.46
AP004247.4-201ENST00000608484 RPGRIP1LQ68CZ1 1315 aa12.15□□□□□ -0.46
AP004247.4-201ENST00000608484 SEPT12Q8IYM1 358 aa12.15□□□□□ -0.46
AP004247.4-201ENST00000608484 RGPD8O14715 1765 aaPredicted RBP12.15□□□□□ -0.46
AP004247.4-201ENST00000608484 SPATA31A3Q5VYP0 1347 aa12.14□□□□□ -0.47
AP004247.4-201ENST00000608484 LRPPRCP42704 1394 aaKnown RBP12.14□□□□□ -0.47
AP004247.4-201ENST00000608484 NUTM2FA1L443 756 aa12.13□□□□□ -0.47
AP004247.4-201ENST00000608484 WAPLQ7Z5K2 1190 aa12.13□□□□□ -0.47
AP004247.4-201ENST00000608484 NAIPQ13075 1403 aa12.12□□□□□ -0.47
AP004247.4-201ENST00000608484 SF3B2Q13435 895 aaKnown RBP12.12□□□□□ -0.47
AP004247.4-201ENST00000608484 VPS72Q15906 364 aa12.12□□□□□ -0.47
AP004247.4-201ENST00000608484 USP32Q8NFA0 1604 aa12.11□□□□□ -0.47
AP004247.4-201ENST00000608484 KRT28Q7Z3Y7 464 aa12.11□□□□□ -0.47
AP004247.4-201ENST00000608484 FMN2Q9NZ56 1722 aa12.11□□□□□ -0.47
AP004247.4-201ENST00000608484 NWD2Q9ULI1 1742 aa12.11□□□□□ -0.47
AP004247.4-201ENST00000608484 PSDA5PKW4 1024 aaPredicted RBP12.1□□□□□ -0.47
AP004247.4-201ENST00000608484 HRCP23327 699 aa12.1□□□□□ -0.47
AP004247.4-201ENST00000608484 KRT27Q7Z3Y8 459 aa12.1□□□□□ -0.47
AP004247.4-201ENST00000608484 STK26Q9P289 416 aa12.1□□□□□ -0.47
AP004247.4-201ENST00000608484 ADGRF5Q8IZF2 1346 aa12.1□□□□□ -0.47
AP004247.4-201ENST00000608484 PLCH1Q4KWH8 1693 aa12.1□□□□□ -0.47
AP004247.4-201ENST00000608484 PLEKHH1Q9ULM0 1364 aa12.09□□□□□ -0.47
AP004247.4-201ENST00000608484 CABLES1Q8TDN4 633 aa12.09□□□□□ -0.47
AP004247.4-201ENST00000608484 TECPR2O15040 1411 aa12.09□□□□□ -0.47
AP004247.4-201ENST00000608484 KIF1AQ12756 1690 aa12.09□□□□□ -0.47
AP004247.4-201ENST00000608484 KNDC1Q76NI1 1749 aa12.08□□□□□ -0.48
AP004247.4-201ENST00000608484 ABCC11Q96J66 1382 aa12.07□□□□□ -0.48
AP004247.4-201ENST00000608484 CCDC144AA2RUR9 1427 aa12.07□□□□□ -0.48
AP004247.4-201ENST00000608484 FAM83GA6ND36 823 aa12.07□□□□□ -0.48
AP004247.4-201ENST00000608484 TMEM132EQ6IEE7 984 aa12.07□□□□□ -0.48
AP004247.4-201ENST00000608484 ABCA3Q99758 1704 aa12.06□□□□□ -0.48
AP004247.4-201ENST00000608484 BAG6P46379 1132 aa12.06□□□□□ -0.48
AP004247.4-201ENST00000608484 PPARGC1BQ86YN6 1023 aaKnown RBP12.06□□□□□ -0.48
AP004247.4-201ENST00000608484 CCDC9Q9Y3X0 531 aaKnown RBP12.06□□□□□ -0.48
AP004247.4-201ENST00000608484 IFT172Q9UG01 1749 aa12.06□□□□□ -0.48
AP004247.4-201ENST00000608484 EN1Q05925 392 aaPredicted RBP12.05□□□□□ -0.48
AP004247.4-201ENST00000608484 PSME1Q06323 249 aa12.05□□□□□ -0.48
AP004247.4-201ENST00000608484 SIRT1Q96EB6 747 aa12.05□□□□□ -0.48
AP004247.4-201ENST00000608484 PHF8Q9UPP1 1060 aa12.05□□□□□ -0.48
AP004247.4-201ENST00000608484 TNS3Q68CZ2 1445 aa12.04□□□□□ -0.48
AP004247.4-201ENST00000608484 NRAPQ86VF7 1730 aa12.04□□□□□ -0.48
AP004247.4-201ENST00000608484 HAP1P54257 671 aaPredicted RBP12.04□□□□□ -0.48
AP004247.4-201ENST00000608484 SLC4A1APQ9BWU0 796 aaKnown RBP12.04□□□□□ -0.48
AP004247.4-201ENST00000608484 SBNO1A3KN83 1393 aa12.04□□□□□ -0.48
AP004247.4-201ENST00000608484 RRBP1Q9P2E9 1410 aaKnown RBP12.03□□□□□ -0.48
AP004247.4-201ENST00000608484 RGPD1P0DJD0 1748 aa12.03□□□□□ -0.48
AP004247.4-201ENST00000608484 PLEKHG5O94827 1062 aa12.03□□□□□ -0.48
AP004247.4-201ENST00000608484 RGL3Q3MIN7 710 aa12.03□□□□□ -0.48
AP004247.4-201ENST00000608484 FAM98CQ17RN3 349 aaKnown RBP12.02□□□□□ -0.49
AP004247.4-201ENST00000608484 YTHDC2Q9H6S0 1430 aaKnown RBP12.02□□□□□ -0.49
AP004247.4-201ENST00000608484 NRXN1Q9ULB1 1477 aa12.02□□□□□ -0.49
AP004247.4-201ENST00000608484 R3HDM1Q15032 1099 aaKnown RBP12.01□□□□□ -0.49
AP004247.4-201ENST00000608484 FAM182BQ5T319 152 aa12.01□□□□□ -0.49
AP004247.4-201ENST00000608484 SPATA31E1Q6ZUB1 1445 aa12.01□□□□□ -0.49
AP004247.4-201ENST00000608484 TNS1Q9HBL0 1735 aaKnown RBP12□□□□□ -0.49
AP004247.4-201ENST00000608484 LMOD2Q6P5Q4 547 aa12□□□□□ -0.49
AP004247.4-201ENST00000608484 BTG4Q9NY30 223 aa12□□□□□ -0.49
AP004247.4-201ENST00000608484 ANKRD30BQ9BXX2 1392 aa12□□□□□ -0.49
AP004247.4-201ENST00000608484 A0A0G2JS52 829 aa11.99□□□□□ -0.49
AP004247.4-201ENST00000608484 MYT1Q01538 1121 aa11.99□□□□□ -0.49
AP004247.4-201ENST00000608484 EZH2Q15910 746 aaKnown RBP11.99□□□□□ -0.49
AP004247.4-201ENST00000608484 C14orf93Q9H972 538 aaKnown RBP11.99□□□□□ -0.49
AP004247.4-201ENST00000608484 ARHGEF10O15013 1369 aa11.99□□□□□ -0.49
AP004247.4-201ENST00000608484 DISP2A7MBM2 1401 aa11.99□□□□□ -0.49
AP004247.4-201ENST00000608484 PIK3C2GO75747 1445 aa11.99□□□□□ -0.49
AP004247.4-201ENST00000608484 TRPM3Q9HCF6 1732 aaPredicted RBP11.99□□□□□ -0.49
AP004247.4-201ENST00000608484 COL14A1Q05707 1796 aaKnown RBP11.98□□□□□ -0.49
AP004247.4-201ENST00000608484 SPATA31A5Q5VU36 1347 aa11.98□□□□□ -0.49
AP004247.4-201ENST00000608484 SPATA31A7Q8IWB4 1347 aa11.98□□□□□ -0.49
AP004247.4-201ENST00000608484 PMFBP1Q8TBY8 1022 aa11.98□□□□□ -0.49
AP004247.4-201ENST00000608484 ALS2Q96Q42 1657 aa11.97□□□□□ -0.49
AP004247.4-201ENST00000608484 CAMKK2Q96RR4 588 aa11.97□□□□□ -0.49
AP004247.4-201ENST00000608484 THSD7AQ9UPZ6 1657 aa11.97□□□□□ -0.49
AP004247.4-201ENST00000608484 CRYBG1Q9Y4K1 1723 aa11.95□□□□□ -0.5
AP004247.4-201ENST00000608484 CFAP70Q5T0N1 1121 aa11.95□□□□□ -0.5
AP004247.4-201ENST00000608484 PRAM1Q96QH2 718 aa11.95□□□□□ -0.5
AP004247.4-201ENST00000608484 DHX57Q6P158 1386 aaKnown RBP11.94□□□□□ -0.5
AP004247.4-201ENST00000608484 SAFB2Q14151 953 aaKnown RBP eCLIP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms