RNA–Protein interactions for RNA: ENST00000607959.5

USF2-216, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 5

Gene USF2, Length 1,920 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-216ENST00000607959 XRN1Q8IZH2 1706 aaKnown RBP30.15■■■□□ 2.42
USF2-216ENST00000607959 PRKRIP1Q9H875 184 aaPredicted RBP30.14■■■□□ 2.42
USF2-216ENST00000607959 NCKAP5LQ9HCH0 1330 aa30.14■■■□□ 2.42
USF2-216ENST00000607959 NPHP4O75161 1426 aaPredicted RBP30.13■■■□□ 2.41
USF2-216ENST00000607959 PUS7Q96PZ0 661 aaKnown RBP30.13■■■□□ 2.41
USF2-216ENST00000607959 AMOTL2Q9Y2J4 779 aa30.13■■■□□ 2.41
USF2-216ENST00000607959 CABP2Q9NPB3 220 aa30.12■■■□□ 2.41
USF2-216ENST00000607959 PIK3R4Q99570 1358 aa30.1■■■□□ 2.41
USF2-216ENST00000607959 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.1■■■□□ 2.41
USF2-216ENST00000607959 CHD2O14647 1828 aaKnown RBP30.08■■■□□ 2.41
USF2-216ENST00000607959 PTCH1Q13635 1447 aa30.08■■■□□ 2.41
USF2-216ENST00000607959 LMTK3Q96Q04 1460 aa30.08■■■□□ 2.41
USF2-216ENST00000607959 CDK19Q9BWU1 502 aa30.06■■■□□ 2.4
USF2-216ENST00000607959 SLC12A5Q9H2X9 1139 aa30.06■■■□□ 2.4
USF2-216ENST00000607959 CCER2I3L3R5 266 aa30.05■■■□□ 2.4
USF2-216ENST00000607959 HSPA2P54652 639 aa30.05■■■□□ 2.4
USF2-216ENST00000607959 KCNA6P17658 529 aa30.03■■■□□ 2.4
USF2-216ENST00000607959 SRPK2P78362 688 aaKnown RBP30.02■■■□□ 2.4
USF2-216ENST00000607959 CARD14Q9BXL6 1004 aa30.02■■■□□ 2.4
USF2-216ENST00000607959 ADGRB2O60241 1585 aa30.02■■■□□ 2.4
USF2-216ENST00000607959 CNGB1Q14028 1251 aaPredicted RBP30.01■■■□□ 2.39
USF2-216ENST00000607959 WASLO00401 505 aaPredicted RBP30■■■□□ 2.39
USF2-216ENST00000607959 TMC1Q8TDI8 760 aa29.99■■■□□ 2.39
USF2-216ENST00000607959 ATAD2Q6PL18 1390 aa29.98■■■□□ 2.39
USF2-216ENST00000607959 CCDC184Q52MB2 194 aa29.97■■■□□ 2.39
USF2-216ENST00000607959 AMER1Q5JTC6 1135 aaPredicted RBP29.97■■■□□ 2.39
USF2-216ENST00000607959 PARD3Q8TEW0 1356 aa29.95■■■□□ 2.39
USF2-216ENST00000607959 CD163L1Q9NR16 1453 aa29.95■■■□□ 2.38
USF2-216ENST00000607959 KNSTRNQ9Y448 316 aa29.94■■■□□ 2.38
USF2-216ENST00000607959 STRCQ7RTU9 1775 aa29.94■■■□□ 2.38
USF2-216ENST00000607959 NINLQ9Y2I6 1382 aa29.93■■■□□ 2.38
USF2-216ENST00000607959 NWD1Q149M9 1564 aa29.92■■■□□ 2.38
USF2-216ENST00000607959 KTN1Q86UP2 1357 aaKnown RBP29.92■■■□□ 2.38
USF2-216ENST00000607959 ANKRD36BQ8N2N9 1353 aa29.92■■■□□ 2.38
USF2-216ENST00000607959 CC2D1BQ5T0F9 858 aaKnown RBP29.92■■■□□ 2.38
USF2-216ENST00000607959 PRR36Q9H6K5 1346 aa29.9■■■□□ 2.38
USF2-216ENST00000607959 ATP7BP35670 1465 aa29.89■■■□□ 2.38
USF2-216ENST00000607959 NPC1L1Q9UHC9 1359 aa29.89■■■□□ 2.38
USF2-216ENST00000607959 RALBP1Q15311 655 aa29.89■■■□□ 2.38
USF2-216ENST00000607959 NSD3Q9BZ95 1437 aa29.89■■■□□ 2.37
USF2-216ENST00000607959 A0A1W2PP64 1363 aa29.89■■■□□ 2.37
USF2-216ENST00000607959 CABP1Q9NZU7 370 aa29.88■■■□□ 2.37
USF2-216ENST00000607959 NUDT16Q96DE0 195 aaKnown RBP29.87■■■□□ 2.37
USF2-216ENST00000607959 USP32Q8NFA0 1604 aa29.86■■■□□ 2.37
USF2-216ENST00000607959 NALCNQ8IZF0 1738 aa29.85■■■□□ 2.37
USF2-216ENST00000607959 YTHDC1Q96MU7 727 aaKnown RBP29.84■■■□□ 2.37
USF2-216ENST00000607959 STRCP1A6NGW2 1772 aa29.84■■■□□ 2.37
USF2-216ENST00000607959 TOPAZ1Q8N9V7 1692 aa29.83■■■□□ 2.37
USF2-216ENST00000607959 MYBBP1AQ9BQG0 1328 aaKnown RBP29.83■■■□□ 2.37
USF2-216ENST00000607959 PPIP5K1Q6PFW1 1433 aa29.83■■■□□ 2.37
USF2-216ENST00000607959 RBM33Q96EV2 1170 aaKnown RBP29.83■■■□□ 2.37
USF2-216ENST00000607959 CCDC61Q9Y6R9 512 aa29.8■■■□□ 2.36
USF2-216ENST00000607959 MRS2Q9HD23 443 aa29.79■■■□□ 2.36
USF2-216ENST00000607959 CPSF1Q10570 1443 aaKnown RBP29.79■■■□□ 2.36
USF2-216ENST00000607959 TERF2IPQ9NYB0 399 aa29.78■■■□□ 2.36
USF2-216ENST00000607959 FMN2Q9NZ56 1722 aa29.77■■■□□ 2.36
USF2-216ENST00000607959 CDC42BPGQ6DT37 1551 aa29.77■■■□□ 2.36
USF2-216ENST00000607959 NUTM2FA1L443 756 aa29.77■■■□□ 2.36
USF2-216ENST00000607959 RGPD8O14715 1765 aaPredicted RBP29.76■■■□□ 2.36
USF2-216ENST00000607959 ADGRL3Q9HAR2 1447 aa29.76■■■□□ 2.35
USF2-216ENST00000607959 NKTRP30414 1462 aaKnown RBP29.75■■■□□ 2.35
USF2-216ENST00000607959 AKAP12Q02952 1782 aa29.74■■■□□ 2.35
USF2-216ENST00000607959 BRD4O60885 1362 aaPredicted RBP29.73■■■□□ 2.35
USF2-216ENST00000607959 HDGFL2Q7Z4V5 671 aaPredicted RBP29.73■■■□□ 2.35
USF2-216ENST00000607959 CGNL1Q0VF96 1302 aa29.72■■■□□ 2.35
USF2-216ENST00000607959 NLRP13Q86W25 1043 aa29.71■■■□□ 2.35
USF2-216ENST00000607959 MON2Q7Z3U7 1717 aa29.71■■■□□ 2.35
USF2-216ENST00000607959 PLEKHG3A1L390 1219 aa29.7■■■□□ 2.34
USF2-216ENST00000607959 PPP2R1AP30153 589 aa29.7■■■□□ 2.34
USF2-216ENST00000607959 ITSN1Q15811 1721 aa29.69■■■□□ 2.34
USF2-216ENST00000607959 ANKARQ7Z5J8 1434 aa29.69■■■□□ 2.34
USF2-216ENST00000607959 PROSER2Q86WR7 435 aaPredicted RBP29.69■■■□□ 2.34
USF2-216ENST00000607959 NSD2O96028 1365 aa29.66■■■□□ 2.34
USF2-216ENST00000607959 FYB1O15117 783 aa29.66■■■□□ 2.34
USF2-216ENST00000607959 ACEP12821 1306 aa29.65■■■□□ 2.34
USF2-216ENST00000607959 EDC4Q6P2E9 1401 aaKnown RBP29.64■■■□□ 2.34
USF2-216ENST00000607959 KIF20BQ96Q89 1820 aa29.64■■■□□ 2.34
USF2-216ENST00000607959 PNISRQ8TF01 805 aaKnown RBP29.64■■■□□ 2.34
USF2-216ENST00000607959 ANKRD26Q9UPS8 1709 aa29.64■■■□□ 2.34
USF2-216ENST00000607959 NRKQ7Z2Y5 1582 aa29.63■■■□□ 2.33
USF2-216ENST00000607959 TMEM94Q12767 1356 aa29.62■■■□□ 2.33
USF2-216ENST00000607959 MORC1Q86VD1 984 aa29.61■■■□□ 2.33
USF2-216ENST00000607959 FAM9BQ8IZU0 186 aa29.61■■■□□ 2.33
USF2-216ENST00000607959 GGNBP2Q9H3C7 697 aa29.61■■■□□ 2.33
USF2-216ENST00000607959 POLR3AO14802 1390 aaPredicted RBP29.61■■■□□ 2.33
USF2-216ENST00000607959 PMFBP1Q8TBY8 1022 aa29.6■■■□□ 2.33
USF2-216ENST00000607959 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.59■■■□□ 2.33
USF2-216ENST00000607959 ZNF692Q9BU19 519 aaPredicted RBP29.59■■■□□ 2.33
USF2-216ENST00000607959 XIRP1Q702N8 1843 aaKnown RBP29.59■■■□□ 2.33
USF2-216ENST00000607959 C14orf37Q86TY3 774 aa29.58■■■□□ 2.33
USF2-216ENST00000607959 ZNF335Q9H4Z2 1342 aaPredicted RBP29.58■■■□□ 2.33
USF2-216ENST00000607959 USP6P35125 1406 aa29.58■■■□□ 2.33
USF2-216ENST00000607959 SSH2Q76I76 1423 aa29.58■■■□□ 2.33
USF2-216ENST00000607959 NCOA3Q9Y6Q9 1424 aa29.56■■■□□ 2.32
USF2-216ENST00000607959 TNNT2P45379 298 aaPredicted RBP29.55■■■□□ 2.32
USF2-216ENST00000607959 C19orf44Q9H6X5 657 aa29.55■■■□□ 2.32
USF2-216ENST00000607959 NME9Q86XW9 330 aa29.54■■■□□ 2.32
USF2-216ENST00000607959 ZRANB1Q9UGI0 708 aa29.53■■■□□ 2.32
USF2-216ENST00000607959 TTC21BQ7Z4L5 1316 aa29.53■■■□□ 2.32
USF2-216ENST00000607959 LRRC7Q96NW7 1537 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms