RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 MRS2Q9HD23 443 aa6.79□□□□□ -1.32
SCARNA15-201ENST00000607520 PTPRKQ15262 1439 aa6.79□□□□□ -1.32
SCARNA15-201ENST00000607520 USP47Q96K76 1375 aa6.79□□□□□ -1.32
SCARNA15-201ENST00000607520 DNMT1P26358 1616 aaKnown RBP6.79□□□□□ -1.32
SCARNA15-201ENST00000607520 CHMP4AQ9BY43 222 aa6.79□□□□□ -1.32
SCARNA15-201ENST00000607520 DISP3Q9P2K9 1392 aa6.78□□□□□ -1.32
SCARNA15-201ENST00000607520 SETD1BQ9UPS6 1966 aaKnown RBP6.78□□□□□ -1.32
SCARNA15-201ENST00000607520 U2AF1L5P0DN76 240 aaPredicted RBP6.78□□□□□ -1.32
SCARNA15-201ENST00000607520 U2AF1Q01081 240 aaKnown RBP eCLIP6.78□□□□□ -1.32
SCARNA15-201ENST00000607520 TMX4Q9H1E5 349 aaPredicted RBP6.78□□□□□ -1.32
SCARNA15-201ENST00000607520 ERVK-7P63135 1459 aa6.78□□□□□ -1.32
SCARNA15-201ENST00000607520 AGLP35573 1532 aa6.78□□□□□ -1.32
SCARNA15-201ENST00000607520 EFCAB6Q5THR3 1501 aa6.78□□□□□ -1.32
SCARNA15-201ENST00000607520 FAM9BQ8IZU0 186 aa6.78□□□□□ -1.32
SCARNA15-201ENST00000607520 ZNF772Q68DY9 489 aaPredicted RBP6.77□□□□□ -1.32
SCARNA15-201ENST00000607520 ZNF330Q9Y3S2 320 aaPredicted RBP6.77□□□□□ -1.32
SCARNA15-201ENST00000607520 SALL2Q9Y467 1007 aaPredicted RBP6.77□□□□□ -1.32
SCARNA15-201ENST00000607520 PLEKHG1Q9ULL1 1385 aa6.77□□□□□ -1.33
SCARNA15-201ENST00000607520 LAS1LQ9Y4W2 734 aaKnown RBP6.77□□□□□ -1.33
SCARNA15-201ENST00000607520 CFAP65Q6ZU64 1925 aaKnown RBP6.77□□□□□ -1.33
SCARNA15-201ENST00000607520 TATP17735 454 aaPredicted RBP6.77□□□□□ -1.33
SCARNA15-201ENST00000607520 NEUROD2Q15784 382 aa6.77□□□□□ -1.33
SCARNA15-201ENST00000607520 KTN1Q86UP2 1357 aaKnown RBP6.77□□□□□ -1.33
SCARNA15-201ENST00000607520 PANK3Q9H999 370 aa6.77□□□□□ -1.33
SCARNA15-201ENST00000607520 SMG6Q86US8 1419 aaKnown RBP6.76□□□□□ -1.33
SCARNA15-201ENST00000607520 KLHL34Q8N239 644 aa6.76□□□□□ -1.33
SCARNA15-201ENST00000607520 MAP3K4Q9Y6R4 1608 aa6.76□□□□□ -1.33
SCARNA15-201ENST00000607520 PIK3R4Q99570 1358 aa6.76□□□□□ -1.33
SCARNA15-201ENST00000607520 GGNBP2Q9H3C7 697 aa6.76□□□□□ -1.33
SCARNA15-201ENST00000607520 ARHGAP31Q2M1Z3 1444 aa6.76□□□□□ -1.33
SCARNA15-201ENST00000607520 TEFQ10587 303 aa6.75□□□□□ -1.33
SCARNA15-201ENST00000607520 SLC12A5Q9H2X9 1139 aa6.75□□□□□ -1.33
SCARNA15-201ENST00000607520 RIMS1Q86UR5 1692 aaKnown RBP6.75□□□□□ -1.33
SCARNA15-201ENST00000607520 CALD1Q05682 793 aaKnown RBP6.74□□□□□ -1.33
SCARNA15-201ENST00000607520 TTC5Q8N0Z6 440 aa6.74□□□□□ -1.33
SCARNA15-201ENST00000607520 GTF2E1P29083 439 aaPredicted RBP6.74□□□□□ -1.33
SCARNA15-201ENST00000607520 NBPF8Q3BBV2 869 aa6.74□□□□□ -1.33
SCARNA15-201ENST00000607520 USP21Q9UK80 565 aa6.74□□□□□ -1.33
SCARNA15-201ENST00000607520 DIP2CQ9Y2E4 1556 aa6.74□□□□□ -1.33
SCARNA15-201ENST00000607520 MAST1Q9Y2H9 1570 aa6.74□□□□□ -1.33
SCARNA15-201ENST00000607520 EXOC5O00471 708 aa6.74□□□□□ -1.33
SCARNA15-201ENST00000607520 DDX54Q8TDD1 881 aaKnown RBP6.74□□□□□ -1.33
SCARNA15-201ENST00000607520 ABCC3O15438 1527 aa6.74□□□□□ -1.33
SCARNA15-201ENST00000607520 ADGBQ8N7X0 1667 aa6.74□□□□□ -1.33
SCARNA15-201ENST00000607520 ORAI2Q96SN7 254 aa6.74□□□□□ -1.33
SCARNA15-201ENST00000607520 ZMYM4Q5VZL5 1548 aa6.74□□□□□ -1.33
SCARNA15-201ENST00000607520 CDC42BPAQ5VT25 1732 aa6.74□□□□□ -1.33
SCARNA15-201ENST00000607520 LMOD3Q0VAK6 560 aa6.73□□□□□ -1.33
SCARNA15-201ENST00000607520 ACEP12821 1306 aa6.73□□□□□ -1.33
SCARNA15-201ENST00000607520 RXRBP28702 533 aa6.73□□□□□ -1.33
SCARNA15-201ENST00000607520 PLEKHO1Q53GL0 409 aaPredicted RBP6.73□□□□□ -1.33
SCARNA15-201ENST00000607520 ZBTB22O15209 634 aa6.73□□□□□ -1.33
SCARNA15-201ENST00000607520 SIRT1Q96EB6 747 aa6.73□□□□□ -1.33
SCARNA15-201ENST00000607520 SPG7Q9UQ90 795 aa6.73□□□□□ -1.33
SCARNA15-201ENST00000607520 RALBP1Q15311 655 aa6.72□□□□□ -1.33
SCARNA15-201ENST00000607520 PPP1R1BQ9UD71 204 aaPredicted RBP6.72□□□□□ -1.33
SCARNA15-201ENST00000607520 TRPC5Q9UL62 973 aaPredicted RBP6.72□□□□□ -1.33
SCARNA15-201ENST00000607520 DIAPH1O60610 1272 aaKnown RBP6.72□□□□□ -1.33
SCARNA15-201ENST00000607520 ARHGEF10O15013 1369 aa6.72□□□□□ -1.33
SCARNA15-201ENST00000607520 CHRNA2Q15822 529 aa6.72□□□□□ -1.33
SCARNA15-201ENST00000607520 NBPF14Q5TI25 921 aa6.72□□□□□ -1.33
SCARNA15-201ENST00000607520 BCL11AQ9H165 835 aa6.72□□□□□ -1.33
SCARNA15-201ENST00000607520 YTHDC2Q9H6S0 1430 aaKnown RBP6.72□□□□□ -1.33
SCARNA15-201ENST00000607520 HSP90AB1P08238 724 aaKnown RBP6.71□□□□□ -1.33
SCARNA15-201ENST00000607520 HSPA1LP34931 641 aa6.71□□□□□ -1.33
SCARNA15-201ENST00000607520 CABLES1Q8TDN4 633 aa6.71□□□□□ -1.34
SCARNA15-201ENST00000607520 QTRT2Q9H974 415 aaKnown RBP6.71□□□□□ -1.34
SCARNA15-201ENST00000607520 TTC21AQ8NDW8 1320 aa6.71□□□□□ -1.34
SCARNA15-201ENST00000607520 ABCC11Q96J66 1382 aa6.71□□□□□ -1.34
SCARNA15-201ENST00000607520 FKBP8Q14318 412 aa6.71□□□□□ -1.34
SCARNA15-201ENST00000607520 TRPM2O94759 1503 aa6.71□□□□□ -1.34
SCARNA15-201ENST00000607520 WASHC2AQ641Q2 1341 aa6.71□□□□□ -1.34
SCARNA15-201ENST00000607520 MADDQ8WXG6 1647 aa6.71□□□□□ -1.34
SCARNA15-201ENST00000607520 PTPRTO14522 1441 aa6.7□□□□□ -1.34
SCARNA15-201ENST00000607520 CDC42BPBQ9Y5S2 1711 aa6.7□□□□□ -1.34
SCARNA15-201ENST00000607520 KDM5CP41229 1560 aa6.7□□□□□ -1.34
SCARNA15-201ENST00000607520 CAMSAP1Q5T5Y3 1602 aa6.7□□□□□ -1.34
SCARNA15-201ENST00000607520 BCL11BQ9C0K0 894 aaPredicted RBP6.7□□□□□ -1.34
SCARNA15-201ENST00000607520 BAG6P46379 1132 aa6.69□□□□□ -1.34
SCARNA15-201ENST00000607520 BTG4Q9NY30 223 aa6.69□□□□□ -1.34
SCARNA15-201ENST00000607520 HNRNPUQ00839 825 aaKnown RBP eCLIP6.69□□□□□ -1.34
SCARNA15-201ENST00000607520 DDB1Q16531 1140 aa6.69□□□□□ -1.34
SCARNA15-201ENST00000607520 PLXNC1O60486 1568 aa6.69□□□□□ -1.34
SCARNA15-201ENST00000607520 JCADQ9P266 1359 aa6.69□□□□□ -1.34
SCARNA15-201ENST00000607520 C11orf95C9JLR9 678 aaPredicted RBP6.69□□□□□ -1.34
SCARNA15-201ENST00000607520 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.69□□□□□ -1.34
SCARNA15-201ENST00000607520 CDCA7Q9BWT1 371 aaPredicted RBP6.69□□□□□ -1.34
SCARNA15-201ENST00000607520 RBM42Q9BTD8 480 aaKnown RBP6.68□□□□□ -1.34
SCARNA15-201ENST00000607520 ABCA6Q8N139 1617 aa6.68□□□□□ -1.34
SCARNA15-201ENST00000607520 DDX17Q92841 729 aaKnown RBP6.68□□□□□ -1.34
SCARNA15-201ENST00000607520 NINLQ9Y2I6 1382 aa6.68□□□□□ -1.34
SCARNA15-201ENST00000607520 CABP4P57796 275 aa6.67□□□□□ -1.34
SCARNA15-201ENST00000607520 BRINP3Q76B58 766 aa6.67□□□□□ -1.34
SCARNA15-201ENST00000607520 NME9Q86XW9 330 aa6.67□□□□□ -1.34
SCARNA15-201ENST00000607520 CLTCQ00610 1675 aaKnown RBP6.67□□□□□ -1.34
SCARNA15-201ENST00000607520 TTC21BQ7Z4L5 1316 aa6.67□□□□□ -1.34
SCARNA15-201ENST00000607520 GCP02774 474 aa6.67□□□□□ -1.34
SCARNA15-201ENST00000607520 ZNF530Q6P9A1 599 aaPredicted RBP6.67□□□□□ -1.34
SCARNA15-201ENST00000607520 GAS2L2Q8NHY3 880 aa6.67□□□□□ -1.34
SCARNA15-201ENST00000607520 STK31Q9BXU1 1019 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms