RNA–Protein interactions for RNA: ENST00000607419.1

LINC01954-201, Transcript of long intergenic non-protein coding RNA 1954, humanhuman

TSL 1 (best) BASIC

Gene LINC01954, Length 461 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01954-201ENST00000607419 BRWD3Q6RI45 1802 aa15.12■□□□□ 0.01
LINC01954-201ENST00000607419 ATAD2Q6PL18 1390 aa15.11■□□□□ 0.01
LINC01954-201ENST00000607419 KIF1BO60333 1816 aa15.11■□□□□ 0.01
LINC01954-201ENST00000607419 USP21Q9UK80 565 aa15.11■□□□□ 0.01
LINC01954-201ENST00000607419 MARF1Q9Y4F3 1742 aaKnown RBP15.11■□□□□ 0.01
LINC01954-201ENST00000607419 CCER1Q8TC90 406 aaPredicted RBP15.1■□□□□ 0.01
LINC01954-201ENST00000607419 FNBP4Q8N3X1 1017 aaPredicted RBP15.09■□□□□ 0.01
LINC01954-201ENST00000607419 ORAI2Q96SN7 254 aa15.09■□□□□ 0.01
LINC01954-201ENST00000607419 ATRNO75882 1429 aa15.09■□□□□ 0.01
LINC01954-201ENST00000607419 CLSPNQ9HAW4 1339 aa15.08■□□□□ 0
LINC01954-201ENST00000607419 C1orf167Q5SNV9 1468 aa15.08■□□□□ 0
LINC01954-201ENST00000607419 TRPC5Q9UL62 973 aaPredicted RBP15.07■□□□□ 0
LINC01954-201ENST00000607419 SOS2Q07890 1332 aaPredicted RBP15.07■□□□□ 0
LINC01954-201ENST00000607419 ANKRD30BQ9BXX2 1392 aa15.07■□□□□ 0
LINC01954-201ENST00000607419 ADGRL3Q9HAR2 1447 aa15.07■□□□□ 0
LINC01954-201ENST00000607419 BCL9LQ86UU0 1499 aa15.07■□□□□ 0
LINC01954-201ENST00000607419 CLTCL1P53675 1640 aa15.06■□□□□ 0
LINC01954-201ENST00000607419 COL22A1Q8NFW1 1626 aaPredicted RBP15.06■□□□□ 0
LINC01954-201ENST00000607419 CCDC144AA2RUR9 1427 aa15.03■□□□□ -0
LINC01954-201ENST00000607419 CACNB1Q02641 598 aaPredicted RBP15.03■□□□□ -0
LINC01954-201ENST00000607419 DEFB132Q7Z7B7 95 aa15.03■□□□□ -0
LINC01954-201ENST00000607419 GLI3P10071 1580 aa15.02□□□□□ -0.01
LINC01954-201ENST00000607419 PTCH1Q13635 1447 aa15□□□□□ -0.01
LINC01954-201ENST00000607419 CCDC125Q86Z20 511 aa15□□□□□ -0.01
LINC01954-201ENST00000607419 NEXMIFQ5QGS0 1516 aa15□□□□□ -0.01
LINC01954-201ENST00000607419 GJD4Q96KN9 370 aaPredicted RBP14.99□□□□□ -0.01
LINC01954-201ENST00000607419 MYOM2P54296 1465 aa14.99□□□□□ -0.01
LINC01954-201ENST00000607419 ROBO2Q9HCK4 1378 aa14.98□□□□□ -0.01
LINC01954-201ENST00000607419 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.98□□□□□ -0.01
LINC01954-201ENST00000607419 LRP5O75197 1615 aa14.98□□□□□ -0.01
LINC01954-201ENST00000607419 ZNF326Q5BKZ1 582 aaKnown RBP14.97□□□□□ -0.01
LINC01954-201ENST00000607419 SIN3AQ96ST3 1273 aa14.97□□□□□ -0.01
LINC01954-201ENST00000607419 XPCQ01831 940 aaPredicted RBP14.96□□□□□ -0.01
LINC01954-201ENST00000607419 IFT172Q9UG01 1749 aa14.96□□□□□ -0.01
LINC01954-201ENST00000607419 PXDNQ92626 1479 aa14.95□□□□□ -0.02
LINC01954-201ENST00000607419 NEUROD1Q13562 356 aa14.95□□□□□ -0.02
LINC01954-201ENST00000607419 PPLO60437 1756 aa14.95□□□□□ -0.02
LINC01954-201ENST00000607419 RALGAPBQ86X10 1494 aa14.94□□□□□ -0.02
LINC01954-201ENST00000607419 RGPD8O14715 1765 aaPredicted RBP14.93□□□□□ -0.02
LINC01954-201ENST00000607419 BLMP54132 1417 aaPredicted RBP14.93□□□□□ -0.02
LINC01954-201ENST00000607419 SPATA31E1Q6ZUB1 1445 aa14.93□□□□□ -0.02
LINC01954-201ENST00000607419 PSDA5PKW4 1024 aaPredicted RBP14.92□□□□□ -0.02
LINC01954-201ENST00000607419 SLIT2O94813 1529 aa14.92□□□□□ -0.02
LINC01954-201ENST00000607419 FOXO3O43524 673 aa14.91□□□□□ -0.02
LINC01954-201ENST00000607419 TIMELESSQ9UNS1 1208 aa14.91□□□□□ -0.02
LINC01954-201ENST00000607419 ESCO1Q5FWF5 840 aa14.9□□□□□ -0.02
LINC01954-201ENST00000607419 UNC5CLQ8IV45 518 aa14.9□□□□□ -0.02
LINC01954-201ENST00000607419 TONSLQ96HA7 1378 aa14.89□□□□□ -0.03
LINC01954-201ENST00000607419 NUTM2FA1L443 756 aa14.88□□□□□ -0.03
LINC01954-201ENST00000607419 SEPT12Q8IYM1 358 aa14.88□□□□□ -0.03
LINC01954-201ENST00000607419 RPGRIP1LQ68CZ1 1315 aa14.88□□□□□ -0.03
LINC01954-201ENST00000607419 RGL3Q3MIN7 710 aa14.87□□□□□ -0.03
LINC01954-201ENST00000607419 PLCH1Q4KWH8 1693 aa14.87□□□□□ -0.03
LINC01954-201ENST00000607419 NPHP3Q7Z494 1330 aa14.86□□□□□ -0.03
LINC01954-201ENST00000607419 USP32Q8NFA0 1604 aa14.85□□□□□ -0.03
LINC01954-201ENST00000607419 ONECUT3O60422 494 aaPredicted RBP14.85□□□□□ -0.03
LINC01954-201ENST00000607419 L3MBTL2Q969R5 705 aa14.85□□□□□ -0.03
LINC01954-201ENST00000607419 STAC3Q96MF2 364 aa14.85□□□□□ -0.03
LINC01954-201ENST00000607419 PRAG1Q86YV5 1406 aa14.84□□□□□ -0.03
LINC01954-201ENST00000607419 WAPLQ7Z5K2 1190 aa14.84□□□□□ -0.03
LINC01954-201ENST00000607419 CABLES1Q8TDN4 633 aa14.84□□□□□ -0.03
LINC01954-201ENST00000607419 ABCA3Q99758 1704 aa14.83□□□□□ -0.03
LINC01954-201ENST00000607419 CDC42BPGQ6DT37 1551 aa14.83□□□□□ -0.04
LINC01954-201ENST00000607419 ZEB1P37275 1124 aaPredicted RBP14.83□□□□□ -0.04
LINC01954-201ENST00000607419 SPATA31A3Q5VYP0 1347 aa14.83□□□□□ -0.04
LINC01954-201ENST00000607419 DCAF11Q8TEB1 546 aa14.82□□□□□ -0.04
LINC01954-201ENST00000607419 CNKSR2Q8WXI2 1034 aa14.82□□□□□ -0.04
LINC01954-201ENST00000607419 NWD2Q9ULI1 1742 aa14.82□□□□□ -0.04
LINC01954-201ENST00000607419 KIAA1210Q9ULL0 1709 aa14.82□□□□□ -0.04
LINC01954-201ENST00000607419 FMN2Q9NZ56 1722 aa14.81□□□□□ -0.04
LINC01954-201ENST00000607419 PLEKHG5O94827 1062 aa14.81□□□□□ -0.04
LINC01954-201ENST00000607419 FAM182BQ5T319 152 aa14.81□□□□□ -0.04
LINC01954-201ENST00000607419 KRT27Q7Z3Y8 459 aa14.81□□□□□ -0.04
LINC01954-201ENST00000607419 VGFO15240 615 aaPredicted RBP14.8□□□□□ -0.04
LINC01954-201ENST00000607419 EN1Q05925 392 aaPredicted RBP14.8□□□□□ -0.04
LINC01954-201ENST00000607419 SF3B2Q13435 895 aaKnown RBP14.8□□□□□ -0.04
LINC01954-201ENST00000607419 VPS72Q15906 364 aa14.8□□□□□ -0.04
LINC01954-201ENST00000607419 PLEKHH1Q9ULM0 1364 aa14.8□□□□□ -0.04
LINC01954-201ENST00000607419 NRAPQ86VF7 1730 aa14.8□□□□□ -0.04
LINC01954-201ENST00000607419 TNS1Q9HBL0 1735 aaKnown RBP14.79□□□□□ -0.04
LINC01954-201ENST00000607419 KDM2AQ9Y2K7 1162 aa14.79□□□□□ -0.04
LINC01954-201ENST00000607419 NRXN1Q9ULB1 1477 aa14.78□□□□□ -0.04
LINC01954-201ENST00000607419 KRT28Q7Z3Y7 464 aa14.78□□□□□ -0.04
LINC01954-201ENST00000607419 TRPM1Q7Z4N2 1603 aa14.77□□□□□ -0.04
LINC01954-201ENST00000607419 FAM83GA6ND36 823 aa14.77□□□□□ -0.05
LINC01954-201ENST00000607419 R3HDM1Q15032 1099 aaKnown RBP14.77□□□□□ -0.05
LINC01954-201ENST00000607419 RGPD1P0DJD0 1748 aa14.77□□□□□ -0.05
LINC01954-201ENST00000607419 STK26Q9P289 416 aa14.76□□□□□ -0.05
LINC01954-201ENST00000607419 ADGRF5Q8IZF2 1346 aa14.75□□□□□ -0.05
LINC01954-201ENST00000607419 BAG6P46379 1132 aa14.75□□□□□ -0.05
LINC01954-201ENST00000607419 TMEM132EQ6IEE7 984 aa14.75□□□□□ -0.05
LINC01954-201ENST00000607419 CCDC9Q9Y3X0 531 aaKnown RBP14.75□□□□□ -0.05
LINC01954-201ENST00000607419 PIK3C2GO75747 1445 aa14.75□□□□□ -0.05
LINC01954-201ENST00000607419 KIF1AQ12756 1690 aa14.74□□□□□ -0.05
LINC01954-201ENST00000607419 EZH2Q15910 746 aaKnown RBP14.74□□□□□ -0.05
LINC01954-201ENST00000607419 FAM98CQ17RN3 349 aaKnown RBP14.74□□□□□ -0.05
LINC01954-201ENST00000607419 LRPPRCP42704 1394 aaKnown RBP14.73□□□□□ -0.05
LINC01954-201ENST00000607419 KNDC1Q76NI1 1749 aa14.73□□□□□ -0.05
LINC01954-201ENST00000607419 DCAF8L1A6NGE4 600 aa14.71□□□□□ -0.05
LINC01954-201ENST00000607419 NBPF8Q3BBV2 869 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms