RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 PPM1GO15355 546 aaPredicted RBP20.96■□□□□ 0.95
CTSA-214ENST00000606788 GOLGA2Q08379 1002 aa20.96■□□□□ 0.95
CTSA-214ENST00000606788 CRBNQ96SW2 442 aa20.96■□□□□ 0.95
CTSA-214ENST00000606788 GLI2P10070 1586 aa20.95■□□□□ 0.94
CTSA-214ENST00000606788 QRICH2Q9H0J4 1663 aa20.95■□□□□ 0.94
CTSA-214ENST00000606788 SLC24A1O60721 1099 aa20.95■□□□□ 0.94
CTSA-214ENST00000606788 CGNL1Q0VF96 1302 aa20.93■□□□□ 0.94
CTSA-214ENST00000606788 CABP1Q9NZU7 370 aa20.93■□□□□ 0.94
CTSA-214ENST00000606788 NCKAP5LQ9HCH0 1330 aa20.93■□□□□ 0.94
CTSA-214ENST00000606788 DUSP27Q5VZP5 1158 aa20.93■□□□□ 0.94
CTSA-214ENST00000606788 TXNDC2Q86VQ3 553 aa20.93■□□□□ 0.94
CTSA-214ENST00000606788 U2SURPO15042 1029 aaKnown RBP20.93■□□□□ 0.94
CTSA-214ENST00000606788 CDK19Q9BWU1 502 aa20.93■□□□□ 0.94
CTSA-214ENST00000606788 ARHGAP31Q2M1Z3 1444 aa20.92■□□□□ 0.94
CTSA-214ENST00000606788 NEURL4Q96JN8 1562 aa20.91■□□□□ 0.94
CTSA-214ENST00000606788 U2AF1L5P0DN76 240 aaPredicted RBP20.91■□□□□ 0.94
CTSA-214ENST00000606788 TRHP20396 242 aaPredicted RBP20.91■□□□□ 0.94
CTSA-214ENST00000606788 U2AF1Q01081 240 aaKnown RBP eCLIP20.91■□□□□ 0.94
CTSA-214ENST00000606788 SBNO2Q9Y2G9 1366 aa20.91■□□□□ 0.94
CTSA-214ENST00000606788 PREX1Q8TCU6 1659 aa20.9■□□□□ 0.94
CTSA-214ENST00000606788 TULP4Q9NRJ4 1543 aa20.9■□□□□ 0.94
CTSA-214ENST00000606788 BCAR3O75815 825 aa20.89■□□□□ 0.93
CTSA-214ENST00000606788 A0A1W2PP64 1363 aa20.88■□□□□ 0.93
CTSA-214ENST00000606788 SETBP1Q9Y6X0 1596 aa20.88■□□□□ 0.93
CTSA-214ENST00000606788 YTHDC2Q9H6S0 1430 aaKnown RBP20.88■□□□□ 0.93
CTSA-214ENST00000606788 CLTCQ00610 1675 aaKnown RBP20.88■□□□□ 0.93
CTSA-214ENST00000606788 ZMYM4Q5VZL5 1548 aa20.87■□□□□ 0.93
CTSA-214ENST00000606788 NPC1L1Q9UHC9 1359 aa20.86■□□□□ 0.93
CTSA-214ENST00000606788 TCP11L2Q8N4U5 519 aa20.86■□□□□ 0.93
CTSA-214ENST00000606788 BCL2L13Q9BXK5 485 aa20.86■□□□□ 0.93
CTSA-214ENST00000606788 ZMYM3Q14202 1370 aa20.86■□□□□ 0.93
CTSA-214ENST00000606788 SLFN5Q08AF3 891 aa20.85■□□□□ 0.93
CTSA-214ENST00000606788 TMEM131LA2VDJ0 1609 aa20.85■□□□□ 0.93
CTSA-214ENST00000606788 RIMS2Q9UQ26 1411 aa20.84■□□□□ 0.93
CTSA-214ENST00000606788 ZNF521Q96K83 1311 aa20.83■□□□□ 0.92
CTSA-214ENST00000606788 CFAP53Q96M91 514 aa20.83■□□□□ 0.92
CTSA-214ENST00000606788 SLC26A8Q96RN1 970 aa20.83■□□□□ 0.92
CTSA-214ENST00000606788 ZRANB1Q9UGI0 708 aa20.83■□□□□ 0.92
CTSA-214ENST00000606788 ANKRD36BQ8N2N9 1353 aa20.82■□□□□ 0.92
CTSA-214ENST00000606788 FYB1O15117 783 aa20.82■□□□□ 0.92
CTSA-214ENST00000606788 MSH5O43196 834 aa20.82■□□□□ 0.92
CTSA-214ENST00000606788 ARHGEF28Q8N1W1 1705 aaKnown RBP20.82■□□□□ 0.92
CTSA-214ENST00000606788 WWC1Q8IX03 1113 aa20.81■□□□□ 0.92
CTSA-214ENST00000606788 FRAT1Q92837 279 aaPredicted RBP20.81■□□□□ 0.92
CTSA-214ENST00000606788 TERF2IPQ9NYB0 399 aa20.81■□□□□ 0.92
CTSA-214ENST00000606788 MYO3AQ8NEV4 1616 aa20.81■□□□□ 0.92
CTSA-214ENST00000606788 METP08581 1390 aa20.8■□□□□ 0.92
CTSA-214ENST00000606788 SOX12O15370 315 aa20.8■□□□□ 0.92
CTSA-214ENST00000606788 NPM2Q86SE8 214 aaKnown RBP20.8■□□□□ 0.92
CTSA-214ENST00000606788 A2ML1A8K2U0 1454 aa20.8■□□□□ 0.92
CTSA-214ENST00000606788 HDGFL2Q7Z4V5 671 aaPredicted RBP20.79■□□□□ 0.92
CTSA-214ENST00000606788 PTPRMP28827 1452 aa20.79■□□□□ 0.92
CTSA-214ENST00000606788 ZC3H13Q5T200 1668 aaKnown RBP20.79■□□□□ 0.92
CTSA-214ENST00000606788 CANXP27824 592 aaKnown RBP20.78■□□□□ 0.92
CTSA-214ENST00000606788 ALKQ9UM73 1620 aa20.78■□□□□ 0.92
CTSA-214ENST00000606788 POLR3AO14802 1390 aaPredicted RBP20.77■□□□□ 0.92
CTSA-214ENST00000606788 RUNDC1Q96C34 613 aa20.77■□□□□ 0.92
CTSA-214ENST00000606788 TNNQ9UQP3 1299 aa20.74■□□□□ 0.91
CTSA-214ENST00000606788 ZFYVE9O95405 1425 aa20.74■□□□□ 0.91
CTSA-214ENST00000606788 KIF13AQ9H1H9 1805 aa20.74■□□□□ 0.91
CTSA-214ENST00000606788 E9PSI1 815 aa20.74■□□□□ 0.91
CTSA-214ENST00000606788 NME9Q86XW9 330 aa20.74■□□□□ 0.91
CTSA-214ENST00000606788 TSR2Q969E8 191 aaKnown RBP20.74■□□□□ 0.91
CTSA-214ENST00000606788 CLUAP1Q96AJ1 413 aa20.74■□□□□ 0.91
CTSA-214ENST00000606788 LTKP29376 864 aa20.73■□□□□ 0.91
CTSA-214ENST00000606788 PANK1Q8TE04 598 aa20.73■□□□□ 0.91
CTSA-214ENST00000606788 HMOX1P09601 288 aa20.72■□□□□ 0.91
CTSA-214ENST00000606788 ATAD2Q6PL18 1390 aa20.72■□□□□ 0.91
CTSA-214ENST00000606788 TNRQ92752 1358 aa20.72■□□□□ 0.91
CTSA-214ENST00000606788 PPP6R1Q9UPN7 881 aa20.7■□□□□ 0.9
CTSA-214ENST00000606788 EMILIN1Q9Y6C2 1016 aa20.7■□□□□ 0.9
CTSA-214ENST00000606788 COG6Q9Y2V7 657 aa20.7■□□□□ 0.9
CTSA-214ENST00000606788 RRS1Q15050 365 aaKnown RBP20.69■□□□□ 0.9
CTSA-214ENST00000606788 ABCC11Q96J66 1382 aa20.69■□□□□ 0.9
CTSA-214ENST00000606788 WASLO00401 505 aaPredicted RBP20.69■□□□□ 0.9
CTSA-214ENST00000606788 NUDT16Q96DE0 195 aaKnown RBP20.69■□□□□ 0.9
CTSA-214ENST00000606788 LAS1LQ9Y4W2 734 aaKnown RBP20.69■□□□□ 0.9
CTSA-214ENST00000606788 INSRP06213 1382 aa20.69■□□□□ 0.9
CTSA-214ENST00000606788 RBM33Q96EV2 1170 aaKnown RBP20.68■□□□□ 0.9
CTSA-214ENST00000606788 ERICH6Q7L0X2 663 aa20.68■□□□□ 0.9
CTSA-214ENST00000606788 RGS3P49796 1198 aa20.67■□□□□ 0.9
CTSA-214ENST00000606788 AGLP35573 1532 aa20.67■□□□□ 0.9
CTSA-214ENST00000606788 TRMT2AQ8IZ69 625 aaKnown RBP20.67■□□□□ 0.9
CTSA-214ENST00000606788 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.67■□□□□ 0.9
CTSA-214ENST00000606788 MAPK8IP3Q9UPT6 1336 aa20.66■□□□□ 0.9
CTSA-214ENST00000606788 CD163L1Q9NR16 1453 aa20.66■□□□□ 0.9
CTSA-214ENST00000606788 PLEKHG5O94827 1062 aa20.66■□□□□ 0.9
CTSA-214ENST00000606788 ARHGEF40Q8TER5 1519 aa20.66■□□□□ 0.9
CTSA-214ENST00000606788 NKTRP30414 1462 aaKnown RBP20.66■□□□□ 0.9
CTSA-214ENST00000606788 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.66■□□□□ 0.9
CTSA-214ENST00000606788 DIAPH1O60610 1272 aaKnown RBP20.65■□□□□ 0.9
CTSA-214ENST00000606788 THUMPD2Q9BTF0 503 aaKnown RBP20.65■□□□□ 0.9
CTSA-214ENST00000606788 PMFBP1Q8TBY8 1022 aa20.64■□□□□ 0.89
CTSA-214ENST00000606788 PUS7Q96PZ0 661 aaKnown RBP20.64■□□□□ 0.89
CTSA-214ENST00000606788 SPATA31D1Q6ZQQ2 1576 aa20.63■□□□□ 0.89
CTSA-214ENST00000606788 POLKQ9UBT6 870 aa20.63■□□□□ 0.89
CTSA-214ENST00000606788 RIPK4P57078 832 aa20.62■□□□□ 0.89
CTSA-214ENST00000606788 PPIP5K1Q6PFW1 1433 aa20.62■□□□□ 0.89
CTSA-214ENST00000606788 ANP32EQ9BTT0 268 aa20.62■□□□□ 0.89
CTSA-214ENST00000606788 SHPRHQ149N8 1683 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms