RNA–Protein interactions for RNA: ENST00000606706.5

LINC00458-205, long intergenic non-protein coding RNA 458, humanhuman

TSL 2

Gene LINC00458, Length 833 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-205ENST00000606706 ZBTB24O43167 697 aaPredicted RBP11.81□□□□□ -0.52
LINC00458-205ENST00000606706 WFS1O76024 890 aa11.8□□□□□ -0.52
LINC00458-205ENST00000606706 WNT7AO00755 349 aa11.77□□□□□ -0.53
LINC00458-205ENST00000606706 SMPD1P17405 629 aa11.77□□□□□ -0.53
LINC00458-205ENST00000606706 NFX1Q12986 1120 aaKnown RBP11.76□□□□□ -0.53
LINC00458-205ENST00000606706 TRIM32Q13049 653 aa11.76□□□□□ -0.53
LINC00458-205ENST00000606706 GRIPAP1Q4V328 841 aa11.75□□□□□ -0.53
LINC00458-205ENST00000606706 MMP16P51512 607 aa11.74□□□□□ -0.53
LINC00458-205ENST00000606706 SNIP1Q8TAD8 396 aaKnown RBP11.74□□□□□ -0.53
LINC00458-205ENST00000606706 J3QL48 77 aa11.73□□□□□ -0.53
LINC00458-205ENST00000606706 MRGPRX2Q96LB1 330 aa11.73□□□□□ -0.53
LINC00458-205ENST00000606706 ATP13A2Q9NQ11 1180 aa11.73□□□□□ -0.53
LINC00458-205ENST00000606706 Q3C1V9 767 aa11.72□□□□□ -0.53
LINC00458-205ENST00000606706 SNRPBP14678 240 aaKnown RBP11.71□□□□□ -0.53
LINC00458-205ENST00000606706 CD46P15529 392 aa11.7□□□□□ -0.54
LINC00458-205ENST00000606706 GPIHBP1Q8IV16 184 aa11.69□□□□□ -0.54
LINC00458-205ENST00000606706 WIPF1O43516 503 aa11.68□□□□□ -0.54
LINC00458-205ENST00000606706 DXOO77932 396 aaKnown RBP11.68□□□□□ -0.54
LINC00458-205ENST00000606706 LCE2CQ5TA81 110 aa11.68□□□□□ -0.54
LINC00458-205ENST00000606706 HPS1Q92902 700 aa11.68□□□□□ -0.54
LINC00458-205ENST00000606706 USB1Q9BQ65 265 aaKnown RBP11.68□□□□□ -0.54
LINC00458-205ENST00000606706 HLA-CQ95604 372 aa11.67□□□□□ -0.54
LINC00458-205ENST00000606706 KDM4AO75164 1064 aa11.66□□□□□ -0.54
LINC00458-205ENST00000606706 TRIM47Q96LD4 638 aa11.66□□□□□ -0.54
LINC00458-205ENST00000606706 CCDC24Q8N4L8 307 aa11.65□□□□□ -0.54
LINC00458-205ENST00000606706 STK17AQ9UEE5 414 aa11.65□□□□□ -0.54
LINC00458-205ENST00000606706 TERTO14746 1132 aaKnown RBP11.64□□□□□ -0.55
LINC00458-205ENST00000606706 REPIN1Q9BWE0 567 aaKnown RBP11.64□□□□□ -0.55
LINC00458-205ENST00000606706 SKOR1P84550 965 aa11.63□□□□□ -0.55
LINC00458-205ENST00000606706 RC3H1Q5TC82 1133 aaKnown RBP11.63□□□□□ -0.55
LINC00458-205ENST00000606706 SENP2Q9HC62 589 aa11.63□□□□□ -0.55
LINC00458-205ENST00000606706 INSM1Q01101 510 aaPredicted RBP11.62□□□□□ -0.55
LINC00458-205ENST00000606706 MDM2Q00987 491 aaPredicted RBP11.59□□□□□ -0.55
LINC00458-205ENST00000606706 MAP2K5Q13163 448 aa11.59□□□□□ -0.55
LINC00458-205ENST00000606706 HOXA2O43364 376 aa11.58□□□□□ -0.56
LINC00458-205ENST00000606706 WNT7BP56706 349 aa11.58□□□□□ -0.56
LINC00458-205ENST00000606706 USP46P62068 366 aa11.58□□□□□ -0.56
LINC00458-205ENST00000606706 GUCA2AQ02747 115 aa11.58□□□□□ -0.56
LINC00458-205ENST00000606706 KIFC2Q96AC6 838 aa11.57□□□□□ -0.56
LINC00458-205ENST00000606706 PLCB2Q00722 1185 aa11.56□□□□□ -0.56
LINC00458-205ENST00000606706 IRF6O14896 467 aa11.55□□□□□ -0.56
LINC00458-205ENST00000606706 ALDH1A1P00352 501 aa11.55□□□□□ -0.56
LINC00458-205ENST00000606706 JUNDP17535 347 aa11.55□□□□□ -0.56
LINC00458-205ENST00000606706 SYMPKQ92797 1274 aaKnown RBP11.55□□□□□ -0.56
LINC00458-205ENST00000606706 PTCRAQ6ISU1 281 aaPredicted RBP11.52□□□□□ -0.57
LINC00458-205ENST00000606706 SIAH2O43255 324 aa11.5□□□□□ -0.57
LINC00458-205ENST00000606706 BMP1P13497 986 aa11.49□□□□□ -0.57
LINC00458-205ENST00000606706 NUDT12Q9BQG2 462 aa11.49□□□□□ -0.57
LINC00458-205ENST00000606706 TRIM46Q7Z4K8 759 aa11.48□□□□□ -0.57
LINC00458-205ENST00000606706 EHBP1Q8NDI1 1231 aa11.48□□□□□ -0.57
LINC00458-205ENST00000606706 CCDC102AQ96A19 550 aa11.48□□□□□ -0.57
LINC00458-205ENST00000606706 MINK1Q8N4C8 1332 aaPredicted RBP11.48□□□□□ -0.57
LINC00458-205ENST00000606706 RETREG3Q86VR2 466 aa11.47□□□□□ -0.57
LINC00458-205ENST00000606706 FAM217BQ9NTX9 383 aaPredicted RBP11.47□□□□□ -0.57
LINC00458-205ENST00000606706 GPCPD1Q9NPB8 672 aa11.46□□□□□ -0.57
LINC00458-205ENST00000606706 NXF1Q9UBU9 619 aaKnown RBP11.46□□□□□ -0.57
LINC00458-205ENST00000606706 CAPN5O15484 640 aaPredicted RBP11.45□□□□□ -0.58
LINC00458-205ENST00000606706 SLC16A10Q8TF71 515 aa11.45□□□□□ -0.58
LINC00458-205ENST00000606706 NUTM1Q86Y26 1132 aa11.44□□□□□ -0.58
LINC00458-205ENST00000606706 WASF2Q9Y6W5 498 aa11.44□□□□□ -0.58
LINC00458-205ENST00000606706 CLCN1P35523 988 aa11.43□□□□□ -0.58
LINC00458-205ENST00000606706 GMPRP36959 345 aa11.43□□□□□ -0.58
LINC00458-205ENST00000606706 SH3BP2P78314 561 aa11.43□□□□□ -0.58
LINC00458-205ENST00000606706 PCDHGC3Q9UN70 934 aa11.43□□□□□ -0.58
LINC00458-205ENST00000606706 KDM2AQ9Y2K7 1162 aa11.43□□□□□ -0.58
LINC00458-205ENST00000606706 VEGFBP49765 207 aa11.42□□□□□ -0.58
LINC00458-205ENST00000606706 FDX1P10109 184 aa11.41□□□□□ -0.58
LINC00458-205ENST00000606706 C6orf229H3BNL8 230 aa11.4□□□□□ -0.58
LINC00458-205ENST00000606706 LORP23490 312 aaPredicted RBP11.4□□□□□ -0.58
LINC00458-205ENST00000606706 CCNYL3P0C7X3 344 aa11.39□□□□□ -0.59
LINC00458-205ENST00000606706 MS4A1P11836 297 aa11.39□□□□□ -0.59
LINC00458-205ENST00000606706 HAP1P54257 671 aaPredicted RBP11.39□□□□□ -0.59
LINC00458-205ENST00000606706 LINC01559Q495D7 138 aa11.38□□□□□ -0.59
LINC00458-205ENST00000606706 TLL2Q9Y6L7 1015 aa11.38□□□□□ -0.59
LINC00458-205ENST00000606706 NPAS3Q8IXF0 933 aa11.37□□□□□ -0.59
LINC00458-205ENST00000606706 IRF7Q92985 503 aa11.37□□□□□ -0.59
LINC00458-205ENST00000606706 UNC93B1Q9H1C4 597 aa11.37□□□□□ -0.59
LINC00458-205ENST00000606706 H3BM21 787 aa11.36□□□□□ -0.59
LINC00458-205ENST00000606706 TULP1O00294 542 aaPredicted RBP11.36□□□□□ -0.59
LINC00458-205ENST00000606706 ZSCAN1Q8NBB4 408 aa11.36□□□□□ -0.59
LINC00458-205ENST00000606706 ZFP42Q96MM3 310 aa11.36□□□□□ -0.59
LINC00458-205ENST00000606706 ERBB4Q15303 1308 aa11.35□□□□□ -0.59
LINC00458-205ENST00000606706 FAM181BA6NEQ2 426 aa11.35□□□□□ -0.59
LINC00458-205ENST00000606706 PTPRNQ16849 979 aa11.35□□□□□ -0.59
LINC00458-205ENST00000606706 KRI1Q8N9T8 703 aaKnown RBP11.35□□□□□ -0.59
LINC00458-205ENST00000606706 BAP1Q92560 729 aa11.35□□□□□ -0.59
LINC00458-205ENST00000606706 EVA1BQ9NVM1 165 aa11.35□□□□□ -0.59
LINC00458-205ENST00000606706 SPIRE2Q8WWL2 714 aa11.34□□□□□ -0.59
LINC00458-205ENST00000606706 NDUFV2P19404 249 aa11.33□□□□□ -0.6
LINC00458-205ENST00000606706 KCNH2Q12809 1159 aa11.32□□□□□ -0.6
LINC00458-205ENST00000606706 SSTR3P32745 418 aaPredicted RBP11.31□□□□□ -0.6
LINC00458-205ENST00000606706 NNTQ13423 1086 aa11.31□□□□□ -0.6
LINC00458-205ENST00000606706 MOXD2PA6NHM9 499 aa11.3□□□□□ -0.6
LINC00458-205ENST00000606706 ZNF511Q8NB15 262 aa11.3□□□□□ -0.6
LINC00458-205ENST00000606706 PRR7Q8TB68 274 aa11.3□□□□□ -0.6
LINC00458-205ENST00000606706 PLEKHG3A1L390 1219 aa11.28□□□□□ -0.6
LINC00458-205ENST00000606706 VARSP26640 1264 aaKnown RBP11.28□□□□□ -0.6
LINC00458-205ENST00000606706 MRPL14Q6P1L8 145 aaKnown RBP11.28□□□□□ -0.6
LINC00458-205ENST00000606706 TIMP2P16035 220 aa11.27□□□□□ -0.61
LINC00458-205ENST00000606706 MPNDQ8N594 471 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms