RNA–Protein interactions for RNA: ENST00000605551.2

SRGAP2D-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2D (pseudogene), humanhuman

BASIC

Gene SRGAP2D, Length 1,021 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2D-201ENST00000605551 KNDC1Q76NI1 1749 aa13.35□□□□□ -0.27
SRGAP2D-201ENST00000605551 TECPR2O15040 1411 aa13.34□□□□□ -0.27
SRGAP2D-201ENST00000605551 SPATA31E1Q6ZUB1 1445 aa13.34□□□□□ -0.27
SRGAP2D-201ENST00000605551 ESCO1Q5FWF5 840 aa13.34□□□□□ -0.27
SRGAP2D-201ENST00000605551 ORAI2Q96SN7 254 aa13.34□□□□□ -0.27
SRGAP2D-201ENST00000605551 STK26Q9P289 416 aa13.34□□□□□ -0.27
SRGAP2D-201ENST00000605551 SOS2Q07890 1332 aaPredicted RBP13.34□□□□□ -0.27
SRGAP2D-201ENST00000605551 ADGRF5Q8IZF2 1346 aa13.34□□□□□ -0.27
SRGAP2D-201ENST00000605551 ADAMTS2O95450 1211 aa13.33□□□□□ -0.28
SRGAP2D-201ENST00000605551 RBM6P78332 1123 aaKnown RBP13.33□□□□□ -0.28
SRGAP2D-201ENST00000605551 PIK3C2GO75747 1445 aa13.32□□□□□ -0.28
SRGAP2D-201ENST00000605551 ABCC11Q96J66 1382 aa13.32□□□□□ -0.28
SRGAP2D-201ENST00000605551 QTRT2Q9H974 415 aaKnown RBP13.31□□□□□ -0.28
SRGAP2D-201ENST00000605551 KIF1AQ12756 1690 aa13.31□□□□□ -0.28
SRGAP2D-201ENST00000605551 YTHDC2Q9H6S0 1430 aaKnown RBP13.3□□□□□ -0.28
SRGAP2D-201ENST00000605551 COL22A1Q8NFW1 1626 aaPredicted RBP13.3□□□□□ -0.28
SRGAP2D-201ENST00000605551 DHX57Q6P158 1386 aaKnown RBP13.3□□□□□ -0.28
SRGAP2D-201ENST00000605551 MYOM2P54296 1465 aa13.29□□□□□ -0.28
SRGAP2D-201ENST00000605551 USP21Q9UK80 565 aa13.29□□□□□ -0.28
SRGAP2D-201ENST00000605551 TRPC5Q9UL62 973 aaPredicted RBP13.29□□□□□ -0.28
SRGAP2D-201ENST00000605551 TMEM132EQ6IEE7 984 aa13.28□□□□□ -0.28
SRGAP2D-201ENST00000605551 WAPLQ7Z5K2 1190 aa13.28□□□□□ -0.28
SRGAP2D-201ENST00000605551 UPF1Q92900 1129 aaKnown RBP eCLIP13.28□□□□□ -0.28
SRGAP2D-201ENST00000605551 RGS12O14924 1447 aa13.28□□□□□ -0.28
SRGAP2D-201ENST00000605551 FMN2Q9NZ56 1722 aa13.27□□□□□ -0.28
SRGAP2D-201ENST00000605551 NUTM2FA1L443 756 aa13.27□□□□□ -0.29
SRGAP2D-201ENST00000605551 FOXO3O43524 673 aa13.27□□□□□ -0.29
SRGAP2D-201ENST00000605551 HAP1P54257 671 aaPredicted RBP13.27□□□□□ -0.29
SRGAP2D-201ENST00000605551 PXDNQ92626 1479 aa13.26□□□□□ -0.29
SRGAP2D-201ENST00000605551 SIRT1Q96EB6 747 aa13.26□□□□□ -0.29
SRGAP2D-201ENST00000605551 RAB3GAP2Q9H2M9 1393 aa13.26□□□□□ -0.29
SRGAP2D-201ENST00000605551 C14orf93Q9H972 538 aaKnown RBP13.26□□□□□ -0.29
SRGAP2D-201ENST00000605551 MARF1Q9Y4F3 1742 aaKnown RBP13.25□□□□□ -0.29
SRGAP2D-201ENST00000605551 ATAD2Q6PL18 1390 aa13.25□□□□□ -0.29
SRGAP2D-201ENST00000605551 POGKQ9P215 609 aa13.25□□□□□ -0.29
SRGAP2D-201ENST00000605551 NRXN1Q9ULB1 1477 aa13.24□□□□□ -0.29
SRGAP2D-201ENST00000605551 EIF3AQ14152 1382 aaKnown RBP13.24□□□□□ -0.29
SRGAP2D-201ENST00000605551 PLEKHH1Q9ULM0 1364 aa13.24□□□□□ -0.29
SRGAP2D-201ENST00000605551 XPCQ01831 940 aaPredicted RBP13.24□□□□□ -0.29
SRGAP2D-201ENST00000605551 PSME1Q06323 249 aa13.24□□□□□ -0.29
SRGAP2D-201ENST00000605551 FNBP4Q8N3X1 1017 aaPredicted RBP13.23□□□□□ -0.29
SRGAP2D-201ENST00000605551 CFAP70Q5T0N1 1121 aa13.22□□□□□ -0.29
SRGAP2D-201ENST00000605551 STAC3Q96MF2 364 aa13.22□□□□□ -0.29
SRGAP2D-201ENST00000605551 DLC1Q96QB1 1528 aa13.22□□□□□ -0.29
SRGAP2D-201ENST00000605551 ATRNO75882 1429 aa13.22□□□□□ -0.29
SRGAP2D-201ENST00000605551 SAFB2Q14151 953 aaKnown RBP eCLIP13.21□□□□□ -0.29
SRGAP2D-201ENST00000605551 KRT28Q7Z3Y7 464 aa13.21□□□□□ -0.29
SRGAP2D-201ENST00000605551 PRAM1Q96QH2 718 aa13.21□□□□□ -0.29
SRGAP2D-201ENST00000605551 PHF8Q9UPP1 1060 aa13.21□□□□□ -0.29
SRGAP2D-201ENST00000605551 TNS3Q68CZ2 1445 aa13.21□□□□□ -0.3
SRGAP2D-201ENST00000605551 SPATA31A3Q5VYP0 1347 aa13.2□□□□□ -0.3
SRGAP2D-201ENST00000605551 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.2□□□□□ -0.3
SRGAP2D-201ENST00000605551 ANKARQ7Z5J8 1434 aa13.2□□□□□ -0.3
SRGAP2D-201ENST00000605551 ARHGEF10O15013 1369 aa13.2□□□□□ -0.3
SRGAP2D-201ENST00000605551 LMOD2Q6P5Q4 547 aa13.19□□□□□ -0.3
SRGAP2D-201ENST00000605551 USP32Q8NFA0 1604 aa13.19□□□□□ -0.3
SRGAP2D-201ENST00000605551 RGPD8O14715 1765 aaPredicted RBP13.18□□□□□ -0.3
SRGAP2D-201ENST00000605551 ADGRB2O60241 1585 aa13.18□□□□□ -0.3
SRGAP2D-201ENST00000605551 SBNO1A3KN83 1393 aa13.18□□□□□ -0.3
SRGAP2D-201ENST00000605551 GPRASP1Q5JY77 1395 aa13.18□□□□□ -0.3
SRGAP2D-201ENST00000605551 DCAF11Q8TEB1 546 aa13.17□□□□□ -0.3
SRGAP2D-201ENST00000605551 KDM2AQ9Y2K7 1162 aa13.17□□□□□ -0.3
SRGAP2D-201ENST00000605551 HRCP23327 699 aa13.16□□□□□ -0.3
SRGAP2D-201ENST00000605551 UNC5CLQ8IV45 518 aa13.16□□□□□ -0.3
SRGAP2D-201ENST00000605551 GJD4Q96KN9 370 aaPredicted RBP13.16□□□□□ -0.3
SRGAP2D-201ENST00000605551 TRAK1Q9UPV9 953 aa13.16□□□□□ -0.3
SRGAP2D-201ENST00000605551 BCL9LQ86UU0 1499 aa13.16□□□□□ -0.3
SRGAP2D-201ENST00000605551 CCDC125Q86Z20 511 aa13.15□□□□□ -0.3
SRGAP2D-201ENST00000605551 CCDC9Q9Y3X0 531 aaKnown RBP13.15□□□□□ -0.3
SRGAP2D-201ENST00000605551 ADGRB1O14514 1584 aa13.15□□□□□ -0.3
SRGAP2D-201ENST00000605551 SLIT2O94813 1529 aa13.14□□□□□ -0.31
SRGAP2D-201ENST00000605551 PLEKHG5O94827 1062 aa13.14□□□□□ -0.31
SRGAP2D-201ENST00000605551 MINK1Q8N4C8 1332 aaPredicted RBP13.13□□□□□ -0.31
SRGAP2D-201ENST00000605551 TULP4Q9NRJ4 1543 aa13.13□□□□□ -0.31
SRGAP2D-201ENST00000605551 NWD2Q9ULI1 1742 aa13.13□□□□□ -0.31
SRGAP2D-201ENST00000605551 PMFBP1Q8TBY8 1022 aa13.13□□□□□ -0.31
SRGAP2D-201ENST00000605551 ITSN1Q15811 1721 aa13.13□□□□□ -0.31
SRGAP2D-201ENST00000605551 PLCH1Q4KWH8 1693 aa13.12□□□□□ -0.31
SRGAP2D-201ENST00000605551 RALGAPBQ86X10 1494 aa13.12□□□□□ -0.31
SRGAP2D-201ENST00000605551 SF3B2Q13435 895 aaKnown RBP13.12□□□□□ -0.31
SRGAP2D-201ENST00000605551 HIRIP3Q9BW71 556 aaPredicted RBP13.12□□□□□ -0.31
SRGAP2D-201ENST00000605551 ABCA3Q99758 1704 aa13.12□□□□□ -0.31
SRGAP2D-201ENST00000605551 A0A0G2JS52 829 aa13.11□□□□□ -0.31
SRGAP2D-201ENST00000605551 MYT1Q01538 1121 aa13.11□□□□□ -0.31
SRGAP2D-201ENST00000605551 NGDNQ8NEJ9 315 aaKnown RBP13.11□□□□□ -0.31
SRGAP2D-201ENST00000605551 ZRANB1Q9UGI0 708 aa13.11□□□□□ -0.31
SRGAP2D-201ENST00000605551 WASLO00401 505 aaPredicted RBP13.1□□□□□ -0.31
SRGAP2D-201ENST00000605551 VPS72Q15906 364 aa13.1□□□□□ -0.31
SRGAP2D-201ENST00000605551 ARHGEF28Q8N1W1 1705 aaKnown RBP13.1□□□□□ -0.31
SRGAP2D-201ENST00000605551 PAK3O75914 559 aaPredicted RBP13.09□□□□□ -0.31
SRGAP2D-201ENST00000605551 GLI3P10071 1580 aa13.09□□□□□ -0.31
SRGAP2D-201ENST00000605551 CABLES1Q8TDN4 633 aa13.09□□□□□ -0.31
SRGAP2D-201ENST00000605551 TRPM3Q9HCF6 1732 aaPredicted RBP13.08□□□□□ -0.32
SRGAP2D-201ENST00000605551 KIAA1210Q9ULL0 1709 aa13.08□□□□□ -0.32
SRGAP2D-201ENST00000605551 COL14A1Q05707 1796 aaKnown RBP13.07□□□□□ -0.32
SRGAP2D-201ENST00000605551 BLMP54132 1417 aaPredicted RBP13.07□□□□□ -0.32
SRGAP2D-201ENST00000605551 SEPT12Q8IYM1 358 aa13.07□□□□□ -0.32
SRGAP2D-201ENST00000605551 ALS2Q96Q42 1657 aa13.06□□□□□ -0.32
SRGAP2D-201ENST00000605551 ATP7BP35670 1465 aa13.05□□□□□ -0.32
SRGAP2D-201ENST00000605551 PRDM11Q9NQV5 511 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms