RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 NSD2O96028 1365 aa26.32■■□□□ 1.8
MMP28-201ENST00000605424 CGNL1Q0VF96 1302 aa26.32■■□□□ 1.8
MMP28-201ENST00000605424 NGEFQ8N5V2 710 aa26.31■■□□□ 1.8
MMP28-201ENST00000605424 RRP1P56182 461 aaKnown RBP26.29■■□□□ 1.8
MMP28-201ENST00000605424 MORC1Q86VD1 984 aa26.29■■□□□ 1.8
MMP28-201ENST00000605424 ADAMTSL3P82987 1691 aa26.29■■□□□ 1.8
MMP28-201ENST00000605424 ESF1Q9H501 851 aaKnown RBP26.29■■□□□ 1.8
MMP28-201ENST00000605424 CDCA7LQ96GN5 454 aa26.27■■□□□ 1.8
MMP28-201ENST00000605424 ATAD2Q6PL18 1390 aa26.27■■□□□ 1.8
MMP28-201ENST00000605424 RIMS2Q9UQ26 1411 aa26.27■■□□□ 1.8
MMP28-201ENST00000605424 STK26Q9P289 416 aa26.27■■□□□ 1.8
MMP28-201ENST00000605424 ZMYM3Q14202 1370 aa26.27■■□□□ 1.8
MMP28-201ENST00000605424 FER1L4A9Z1Z3 1794 aa26.27■■□□□ 1.8
MMP28-201ENST00000605424 ZNF521Q96K83 1311 aa26.26■■□□□ 1.8
MMP28-201ENST00000605424 CEBPAP49715 358 aaPredicted RBP26.26■■□□□ 1.79
MMP28-201ENST00000605424 DLC1Q96QB1 1528 aa26.26■■□□□ 1.79
MMP28-201ENST00000605424 B4GALNT3Q6L9W6 998 aa26.26■■□□□ 1.79
MMP28-201ENST00000605424 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.25■■□□□ 1.79
MMP28-201ENST00000605424 POGKQ9P215 609 aa26.24■■□□□ 1.79
MMP28-201ENST00000605424 CABP2Q9NPB3 220 aa26.24■■□□□ 1.79
MMP28-201ENST00000605424 PRAM1Q96QH2 718 aa26.23■■□□□ 1.79
MMP28-201ENST00000605424 PLEKHH1Q9ULM0 1364 aa26.23■■□□□ 1.79
MMP28-201ENST00000605424 RIMS1Q86UR5 1692 aaKnown RBP26.21■■□□□ 1.79
MMP28-201ENST00000605424 KDM4FA0A1W2PPD8 638 aa26.21■■□□□ 1.79
MMP28-201ENST00000605424 GOLGA2Q08379 1002 aa26.21■■□□□ 1.79
MMP28-201ENST00000605424 PLPPR3Q6T4P5 718 aa26.21■■□□□ 1.79
MMP28-201ENST00000605424 HDGFP51858 240 aaKnown RBP26.2■■□□□ 1.79
MMP28-201ENST00000605424 SRPK2P78362 688 aaKnown RBP26.2■■□□□ 1.79
MMP28-201ENST00000605424 SETD1AO15047 1707 aaKnown RBP26.2■■□□□ 1.78
MMP28-201ENST00000605424 SAFB2Q14151 953 aaKnown RBP eCLIP26.19■■□□□ 1.78
MMP28-201ENST00000605424 CCDC136Q96JN2 1154 aa26.18■■□□□ 1.78
MMP28-201ENST00000605424 ABCC11Q96J66 1382 aa26.18■■□□□ 1.78
MMP28-201ENST00000605424 TERF2IPQ9NYB0 399 aa26.18■■□□□ 1.78
MMP28-201ENST00000605424 C3P01024 1663 aa26.17■■□□□ 1.78
MMP28-201ENST00000605424 DUSP27Q5VZP5 1158 aa26.16■■□□□ 1.78
MMP28-201ENST00000605424 CFAP53Q96M91 514 aa26.16■■□□□ 1.78
MMP28-201ENST00000605424 RBM19Q9Y4C8 960 aaKnown RBP26.16■■□□□ 1.78
MMP28-201ENST00000605424 A0A1W2PP64 1363 aa26.15■■□□□ 1.78
MMP28-201ENST00000605424 MINK1Q8N4C8 1332 aaPredicted RBP26.15■■□□□ 1.78
MMP28-201ENST00000605424 SHPRHQ149N8 1683 aa26.15■■□□□ 1.78
MMP28-201ENST00000605424 TNRQ92752 1358 aa26.15■■□□□ 1.78
MMP28-201ENST00000605424 MED14O60244 1454 aa26.14■■□□□ 1.78
MMP28-201ENST00000605424 APAF1O14727 1248 aa26.13■■□□□ 1.77
MMP28-201ENST00000605424 SLFN5Q08AF3 891 aa26.13■■□□□ 1.77
MMP28-201ENST00000605424 TRMT2AQ8IZ69 625 aaKnown RBP26.13■■□□□ 1.77
MMP28-201ENST00000605424 CCDC146Q8IYE0 955 aa26.12■■□□□ 1.77
MMP28-201ENST00000605424 NRXN3Q9Y4C0 1643 aa26.11■■□□□ 1.77
MMP28-201ENST00000605424 CDK19Q9BWU1 502 aa26.11■■□□□ 1.77
MMP28-201ENST00000605424 MTHFSP49914 203 aa26.1■■□□□ 1.77
MMP28-201ENST00000605424 SIRT1Q96EB6 747 aa26.1■■□□□ 1.77
MMP28-201ENST00000605424 CD163L1Q9NR16 1453 aa26.09■■□□□ 1.77
MMP28-201ENST00000605424 NCBP3Q53F19 620 aaKnown RBP26.09■■□□□ 1.77
MMP28-201ENST00000605424 HDGFL2Q7Z4V5 671 aaPredicted RBP26.09■■□□□ 1.77
MMP28-201ENST00000605424 ANKRD26Q9UPS8 1709 aa26.08■■□□□ 1.77
MMP28-201ENST00000605424 SENP3Q9H4L4 574 aaPredicted RBP26.08■■□□□ 1.77
MMP28-201ENST00000605424 E9PSI1 815 aa26.08■■□□□ 1.76
MMP28-201ENST00000605424 TNNT2P45379 298 aaPredicted RBP26.08■■□□□ 1.76
MMP28-201ENST00000605424 RUNDC1Q96C34 613 aa26.07■■□□□ 1.76
MMP28-201ENST00000605424 KNDC1Q76NI1 1749 aa26.06■■□□□ 1.76
MMP28-201ENST00000605424 EXOC6Q8TAG9 804 aa26.06■■□□□ 1.76
MMP28-201ENST00000605424 UBR1Q8IWV7 1749 aa26.05■■□□□ 1.76
MMP28-201ENST00000605424 TECPR2O15040 1411 aa26.05■■□□□ 1.76
MMP28-201ENST00000605424 FAM135BQ49AJ0 1406 aa26.05■■□□□ 1.76
MMP28-201ENST00000605424 TMEM2Q9UHN6 1383 aa26.04■■□□□ 1.76
MMP28-201ENST00000605424 ATP7BP35670 1465 aa26.04■■□□□ 1.76
MMP28-201ENST00000605424 NLRP1Q9C000 1473 aa26.04■■□□□ 1.76
MMP28-201ENST00000605424 NKTRP30414 1462 aaKnown RBP26.03■■□□□ 1.76
MMP28-201ENST00000605424 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.02■■□□□ 1.76
MMP28-201ENST00000605424 FYB1O15117 783 aa26.02■■□□□ 1.76
MMP28-201ENST00000605424 METP08581 1390 aa26.01■■□□□ 1.75
MMP28-201ENST00000605424 IQSEC2Q5JU85 1478 aa26■■□□□ 1.75
MMP28-201ENST00000605424 WAPLQ7Z5K2 1190 aa26■■□□□ 1.75
MMP28-201ENST00000605424 CABP1Q9NZU7 370 aa26■■□□□ 1.75
MMP28-201ENST00000605424 WWC1Q8IX03 1113 aa25.99■■□□□ 1.75
MMP28-201ENST00000605424 CCDC27Q2M243 656 aa25.98■■□□□ 1.75
MMP28-201ENST00000605424 CPS1P31327 1500 aa25.98■■□□□ 1.75
MMP28-201ENST00000605424 PHF23Q9BUL5 403 aaPredicted RBP25.98■■□□□ 1.75
MMP28-201ENST00000605424 GGNBP2Q9H3C7 697 aa25.97■■□□□ 1.75
MMP28-201ENST00000605424 KIF20BQ96Q89 1820 aa25.97■■□□□ 1.75
MMP28-201ENST00000605424 WASLO00401 505 aaPredicted RBP25.96■■□□□ 1.75
MMP28-201ENST00000605424 PLIN1O60240 522 aa25.95■■□□□ 1.74
MMP28-201ENST00000605424 WDR63Q8IWG1 891 aa25.95■■□□□ 1.74
MMP28-201ENST00000605424 TCP11L2Q8N4U5 519 aa25.95■■□□□ 1.74
MMP28-201ENST00000605424 SPINK5Q9NQ38 1064 aaPredicted RBP25.94■■□□□ 1.74
MMP28-201ENST00000605424 PLEKHG1Q9ULL1 1385 aa25.94■■□□□ 1.74
MMP28-201ENST00000605424 COL3A1P02461 1466 aaPredicted RBP25.92■■□□□ 1.74
MMP28-201ENST00000605424 CRBNQ96SW2 442 aa25.92■■□□□ 1.74
MMP28-201ENST00000605424 CPSF1Q10570 1443 aaKnown RBP25.92■■□□□ 1.74
MMP28-201ENST00000605424 FANCIQ9NVI1 1328 aa25.91■■□□□ 1.74
MMP28-201ENST00000605424 U2AF1L5P0DN76 240 aaPredicted RBP25.91■■□□□ 1.74
MMP28-201ENST00000605424 U2AF1Q01081 240 aaKnown RBP eCLIP25.91■■□□□ 1.74
MMP28-201ENST00000605424 ADGRB2O60241 1585 aa25.91■■□□□ 1.74
MMP28-201ENST00000605424 PNPLA6Q8IY17 1366 aa25.91■■□□□ 1.74
MMP28-201ENST00000605424 TXNDC2Q86VQ3 553 aa25.9■■□□□ 1.74
MMP28-201ENST00000605424 ADAMTS13Q76LX8 1427 aa25.9■■□□□ 1.74
MMP28-201ENST00000605424 EDC4Q6P2E9 1401 aaKnown RBP25.89■■□□□ 1.74
MMP28-201ENST00000605424 PPIP5K1Q6PFW1 1433 aa25.88■■□□□ 1.73
MMP28-201ENST00000605424 PNNQ9H307 717 aaKnown RBP25.87■■□□□ 1.73
MMP28-201ENST00000605424 DMRT2Q9Y5R5 561 aa25.87■■□□□ 1.73
MMP28-201ENST00000605424 SETD1BQ9UPS6 1966 aaKnown RBP25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms