RNA–Protein interactions for RNA: ENST00000604922.1

SH3D19-213, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-213ENST00000604922 GPBP1L1Q9HC44 474 aaPredicted RBP11.5□□□□□ -0.57
SH3D19-213ENST00000604922 NDUFV2P19404 249 aa11.49□□□□□ -0.57
SH3D19-213ENST00000604922 USB1Q9BQ65 265 aaKnown RBP11.49□□□□□ -0.57
SH3D19-213ENST00000604922 RSPH6AQ9H0K4 717 aa11.49□□□□□ -0.57
SH3D19-213ENST00000604922 MSS51Q4VC12 460 aa11.48□□□□□ -0.57
SH3D19-213ENST00000604922 ANKLE1Q8NAG6 615 aa11.48□□□□□ -0.57
SH3D19-213ENST00000604922 C6orf229H3BNL8 230 aa11.47□□□□□ -0.57
SH3D19-213ENST00000604922 GJA5P36382 358 aa11.47□□□□□ -0.57
SH3D19-213ENST00000604922 NEUROD2Q15784 382 aa11.47□□□□□ -0.57
SH3D19-213ENST00000604922 FAM160A2Q8N612 972 aaPredicted RBP11.47□□□□□ -0.57
SH3D19-213ENST00000604922 DDRGK1Q96HY6 314 aa11.47□□□□□ -0.57
SH3D19-213ENST00000604922 PPEF1O14829 653 aaPredicted RBP11.45□□□□□ -0.58
SH3D19-213ENST00000604922 RSBN1LQ6PCB5 846 aaPredicted RBP11.45□□□□□ -0.58
SH3D19-213ENST00000604922 RIC3Q7Z5B4 369 aa11.45□□□□□ -0.58
SH3D19-213ENST00000604922 PRKD2Q9BZL6 878 aa11.45□□□□□ -0.58
SH3D19-213ENST00000604922 PCDHGC3Q9UN70 934 aa11.45□□□□□ -0.58
SH3D19-213ENST00000604922 RETREG3Q86VR2 466 aa11.44□□□□□ -0.58
SH3D19-213ENST00000604922 V9GY48 417 aaPredicted RBP11.44□□□□□ -0.58
SH3D19-213ENST00000604922 SPTLC1O15269 473 aa11.43□□□□□ -0.58
SH3D19-213ENST00000604922 MYSM1Q5VVJ2 828 aa11.43□□□□□ -0.58
SH3D19-213ENST00000604922 SYMPKQ92797 1274 aaKnown RBP11.43□□□□□ -0.58
SH3D19-213ENST00000604922 SPDYE5A6NIY4 337 aa11.42□□□□□ -0.58
SH3D19-213ENST00000604922 MTMR2Q13614 643 aa11.42□□□□□ -0.58
SH3D19-213ENST00000604922 FAM117AQ9C073 453 aa11.42□□□□□ -0.58
SH3D19-213ENST00000604922 PRDM9Q9NQV7 894 aa11.42□□□□□ -0.58
SH3D19-213ENST00000604922 NRG2O14511 850 aaPredicted RBP11.4□□□□□ -0.58
SH3D19-213ENST00000604922 MMP16P51512 607 aa11.4□□□□□ -0.58
SH3D19-213ENST00000604922 FCF1Q9Y324 198 aaKnown RBP11.4□□□□□ -0.58
SH3D19-213ENST00000604922 PRKCSHP14314 528 aaPredicted RBP11.39□□□□□ -0.59
SH3D19-213ENST00000604922 SLC19A1P41440 591 aa11.39□□□□□ -0.59
SH3D19-213ENST00000604922 PRPF38BQ5VTL8 546 aaKnown RBP11.39□□□□□ -0.59
SH3D19-213ENST00000604922 ZBTB3Q9H5J0 574 aa11.39□□□□□ -0.59
SH3D19-213ENST00000604922 DXOO77932 396 aaKnown RBP11.38□□□□□ -0.59
SH3D19-213ENST00000604922 CLK2P49760 499 aaKnown RBP11.38□□□□□ -0.59
SH3D19-213ENST00000604922 CSPP1Q1MSJ5 1256 aa11.38□□□□□ -0.59
SH3D19-213ENST00000604922 POLR3EQ9NVU0 708 aa11.38□□□□□ -0.59
SH3D19-213ENST00000604922 ATP1B4Q9UN42 357 aaPredicted RBP11.38□□□□□ -0.59
SH3D19-213ENST00000604922 PCDHB15Q9Y5E8 787 aa11.38□□□□□ -0.59
SH3D19-213ENST00000604922 JUNDP17535 347 aa11.37□□□□□ -0.59
SH3D19-213ENST00000604922 BRPF1P55201 1214 aaPredicted RBP11.37□□□□□ -0.59
SH3D19-213ENST00000604922 TUSC1Q2TAM9 212 aa11.37□□□□□ -0.59
SH3D19-213ENST00000604922 LIMD1Q9UGP4 676 aa11.37□□□□□ -0.59
SH3D19-213ENST00000604922 NUTM2BA6NNL0 878 aaPredicted RBP11.36□□□□□ -0.59
SH3D19-213ENST00000604922 NUTM2EB1AL46 878 aaPredicted RBP11.36□□□□□ -0.59
SH3D19-213ENST00000604922 ZBTB24O43167 697 aaPredicted RBP11.36□□□□□ -0.59
SH3D19-213ENST00000604922 NUTM2DQ5VT03 806 aaPredicted RBP11.36□□□□□ -0.59
SH3D19-213ENST00000604922 NUTM2AQ8IVF1 878 aaPredicted RBP11.36□□□□□ -0.59
SH3D19-213ENST00000604922 PRR7Q8TB68 274 aa11.36□□□□□ -0.59
SH3D19-213ENST00000604922 HRCP23327 699 aa11.35□□□□□ -0.59
SH3D19-213ENST00000604922 SKIV2LQ15477 1246 aaKnown RBP11.35□□□□□ -0.59
SH3D19-213ENST00000604922 SH3D19Q5HYK7 790 aa11.35□□□□□ -0.59
SH3D19-213ENST00000604922 CCDC24Q8N4L8 307 aa11.34□□□□□ -0.59
SH3D19-213ENST00000604922 PLEKHG3A1L390 1219 aa11.33□□□□□ -0.6
SH3D19-213ENST00000604922 LIAT1Q6ZQX7 453 aa11.33□□□□□ -0.6
SH3D19-213ENST00000604922 CD2BP2O95400 341 aaKnown RBP11.32□□□□□ -0.6
SH3D19-213ENST00000604922 RPIAP49247 311 aa11.32□□□□□ -0.6
SH3D19-213ENST00000604922 PLA2G2CQ5R387 149 aa11.32□□□□□ -0.6
SH3D19-213ENST00000604922 SPRYD7Q5W111 196 aa11.32□□□□□ -0.6
SH3D19-213ENST00000604922 DESI1Q6ICB0 168 aa11.32□□□□□ -0.6
SH3D19-213ENST00000604922 IL27Q8NEV9 243 aa11.32□□□□□ -0.6
SH3D19-213ENST00000604922 CABLES1Q8TDN4 633 aa11.32□□□□□ -0.6
SH3D19-213ENST00000604922 ZNF598Q86UK7 904 aaKnown RBP11.31□□□□□ -0.6
SH3D19-213ENST00000604922 NUDT12Q9BQG2 462 aa11.31□□□□□ -0.6
SH3D19-213ENST00000604922 LILRB3O75022 631 aa11.3□□□□□ -0.6
SH3D19-213ENST00000604922 EMID1Q96A84 441 aaPredicted RBP11.3□□□□□ -0.6
SH3D19-213ENST00000604922 QPCTQ16769 361 aa11.29□□□□□ -0.6
SH3D19-213ENST00000604922 PTPRNQ16849 979 aa11.29□□□□□ -0.6
SH3D19-213ENST00000604922 TSC1Q92574 1164 aa11.29□□□□□ -0.6
SH3D19-213ENST00000604922 ZNF697Q5TEC3 545 aa11.28□□□□□ -0.6
SH3D19-213ENST00000604922 CFAP99D6REC4 459 aa11.27□□□□□ -0.61
SH3D19-213ENST00000604922 CCNYL3P0C7X3 344 aa11.27□□□□□ -0.61
SH3D19-213ENST00000604922 HELBQ8NG08 1087 aaPredicted RBP11.26□□□□□ -0.61
SH3D19-213ENST00000604922 PCMTD1Q96MG8 357 aaPredicted RBP11.26□□□□□ -0.61
SH3D19-213ENST00000604922 GOPCQ9HD26 462 aa11.26□□□□□ -0.61
SH3D19-213ENST00000604922 RTL5Q5HYW3 569 aaPredicted RBP11.25□□□□□ -0.61
SH3D19-213ENST00000604922 PROCA1Q8NCQ7 364 aaPredicted RBP11.25□□□□□ -0.61
SH3D19-213ENST00000604922 LOC100996750A0A140TA64 210 aa11.24□□□□□ -0.61
SH3D19-213ENST00000604922 LYPD8Q6UX82 237 aa11.24□□□□□ -0.61
SH3D19-213ENST00000604922 KRTAP4-6Q9BYQ5 205 aa11.24□□□□□ -0.61
SH3D19-213ENST00000604922 EVA1BQ9NVM1 165 aa11.24□□□□□ -0.61
SH3D19-213ENST00000604922 TRIM32Q13049 653 aa11.23□□□□□ -0.61
SH3D19-213ENST00000604922 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.23□□□□□ -0.61
SH3D19-213ENST00000604922 PDZRN3Q9UPQ7 1066 aa11.23□□□□□ -0.61
SH3D19-213ENST00000604922 CTHP32929 405 aa11.21□□□□□ -0.61
SH3D19-213ENST00000604922 KCNH2Q12809 1159 aa11.21□□□□□ -0.61
SH3D19-213ENST00000604922 FOXC1Q12948 553 aa11.19□□□□□ -0.62
SH3D19-213ENST00000604922 PPP2R2DQ66LE6 453 aa11.19□□□□□ -0.62
SH3D19-213ENST00000604922 PTCRAQ6ISU1 281 aaPredicted RBP11.19□□□□□ -0.62
SH3D19-213ENST00000604922 PRR20EP86478 221 aa11.18□□□□□ -0.62
SH3D19-213ENST00000604922 PRR20CP86479 221 aa11.18□□□□□ -0.62
SH3D19-213ENST00000604922 PRR20DP86480 221 aa11.18□□□□□ -0.62
SH3D19-213ENST00000604922 PRR20BP86481 221 aa11.18□□□□□ -0.62
SH3D19-213ENST00000604922 PRR20AP86496 221 aa11.18□□□□□ -0.62
SH3D19-213ENST00000604922 LCE2AQ5TA79 106 aaPredicted RBP11.18□□□□□ -0.62
SH3D19-213ENST00000604922 UNC93B1Q9H1C4 597 aa11.17□□□□□ -0.62
SH3D19-213ENST00000604922 TNFRSF10AO00220 468 aa11.16□□□□□ -0.62
SH3D19-213ENST00000604922 PER1O15534 1290 aaPredicted RBP11.16□□□□□ -0.62
SH3D19-213ENST00000604922 GDF9O60383 454 aa11.16□□□□□ -0.62
SH3D19-213ENST00000604922 WNT7BP56706 349 aa11.16□□□□□ -0.62
SH3D19-213ENST00000604922 TRIM67Q6ZTA4 783 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms