RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 FMNL1O95466 1100 aaPredicted RBP6.88□□□□□ -1.31
IGHV3-29-201ENST00000604817 FOXC1Q12948 553 aa6.88□□□□□ -1.31
IGHV3-29-201ENST00000604817 NPM2Q86SE8 214 aaKnown RBP6.88□□□□□ -1.31
IGHV3-29-201ENST00000604817 CCDC180Q9P1Z9 1646 aa6.87□□□□□ -1.31
IGHV3-29-201ENST00000604817 ST8SIA5O15466 376 aa6.87□□□□□ -1.31
IGHV3-29-201ENST00000604817 AVPP01185 164 aa6.87□□□□□ -1.31
IGHV3-29-201ENST00000604817 CTC1Q2NKJ3 1217 aa6.87□□□□□ -1.31
IGHV3-29-201ENST00000604817 THAP11Q96EK4 314 aa6.87□□□□□ -1.31
IGHV3-29-201ENST00000604817 FCF1Q9Y324 198 aaKnown RBP6.87□□□□□ -1.31
IGHV3-29-201ENST00000604817 DDX11L8A8MPP1 907 aa6.86□□□□□ -1.31
IGHV3-29-201ENST00000604817 FUT2Q10981 343 aa6.86□□□□□ -1.31
IGHV3-29-201ENST00000604817 GRIPAP1Q4V328 841 aa6.86□□□□□ -1.31
IGHV3-29-201ENST00000604817 RBM26Q5T8P6 1007 aaKnown RBP6.86□□□□□ -1.31
IGHV3-29-201ENST00000604817 TREML4Q6UXN2 200 aa6.86□□□□□ -1.31
IGHV3-29-201ENST00000604817 CYP4X1Q8N118 509 aa6.86□□□□□ -1.31
IGHV3-29-201ENST00000604817 SLC24A3Q9HC58 644 aa6.86□□□□□ -1.31
IGHV3-29-201ENST00000604817 TOR4AQ9NXH8 423 aa6.86□□□□□ -1.31
IGHV3-29-201ENST00000604817 ZBTB24O43167 697 aaPredicted RBP6.85□□□□□ -1.31
IGHV3-29-201ENST00000604817 GCGRP47871 477 aa6.85□□□□□ -1.31
IGHV3-29-201ENST00000604817 AK7Q96M32 723 aa6.85□□□□□ -1.31
IGHV3-29-201ENST00000604817 ZMYND15Q9H091 742 aa6.85□□□□□ -1.31
IGHV3-29-201ENST00000604817 AXIN1O15169 862 aa6.84□□□□□ -1.31
IGHV3-29-201ENST00000604817 SMCPP49901 116 aaPredicted RBP6.84□□□□□ -1.31
IGHV3-29-201ENST00000604817 MSS51Q4VC12 460 aa6.84□□□□□ -1.31
IGHV3-29-201ENST00000604817 FAM160A2Q8N612 972 aaPredicted RBP6.84□□□□□ -1.31
IGHV3-29-201ENST00000604817 SLC27A5Q9Y2P5 690 aa6.84□□□□□ -1.31
IGHV3-29-201ENST00000604817 BRICD5Q6PL45 260 aa6.83□□□□□ -1.32
IGHV3-29-201ENST00000604817 Q3C1V9 767 aa6.82□□□□□ -1.32
IGHV3-29-201ENST00000604817 KRI1Q8N9T8 703 aaKnown RBP6.82□□□□□ -1.32
IGHV3-29-201ENST00000604817 TTC24A2A3L6 582 aaPredicted RBP6.81□□□□□ -1.32
IGHV3-29-201ENST00000604817 C11orf95C9JLR9 678 aaPredicted RBP6.81□□□□□ -1.32
IGHV3-29-201ENST00000604817 GPR37O15354 613 aa6.81□□□□□ -1.32
IGHV3-29-201ENST00000604817 FECHP22830 423 aa6.81□□□□□ -1.32
IGHV3-29-201ENST00000604817 LCE2AQ5TA79 106 aaPredicted RBP6.81□□□□□ -1.32
IGHV3-29-201ENST00000604817 WNT7AO00755 349 aa6.8□□□□□ -1.32
IGHV3-29-201ENST00000604817 MINK1Q8N4C8 1332 aaPredicted RBP6.79□□□□□ -1.32
IGHV3-29-201ENST00000604817 SNIP1Q8TAD8 396 aaKnown RBP6.79□□□□□ -1.32
IGHV3-29-201ENST00000604817 RSPH6AQ9H0K4 717 aa6.79□□□□□ -1.32
IGHV3-29-201ENST00000604817 PRDM9Q9NQV7 894 aa6.79□□□□□ -1.32
IGHV3-29-201ENST00000604817 WFS1O76024 890 aa6.78□□□□□ -1.32
IGHV3-29-201ENST00000604817 MAP2K5Q13163 448 aa6.78□□□□□ -1.32
IGHV3-29-201ENST00000604817 REPIN1Q9BWE0 567 aaKnown RBP6.78□□□□□ -1.32
IGHV3-29-201ENST00000604817 GMPR2Q9P2T1 348 aaKnown RBP6.78□□□□□ -1.32
IGHV3-29-201ENST00000604817 DACH1Q9UI36 760 aa6.78□□□□□ -1.32
IGHV3-29-201ENST00000604817 MMP16P51512 607 aa6.77□□□□□ -1.33
IGHV3-29-201ENST00000604817 TRIM32Q13049 653 aa6.77□□□□□ -1.33
IGHV3-29-201ENST00000604817 RNF19BQ6ZMZ0 732 aa6.77□□□□□ -1.33
IGHV3-29-201ENST00000604817 NLRP7Q8WX94 980 aa6.76□□□□□ -1.33
IGHV3-29-201ENST00000604817 PHOX2BQ99453 314 aa6.76□□□□□ -1.33
IGHV3-29-201ENST00000604817 SENP2Q9HC62 589 aa6.76□□□□□ -1.33
IGHV3-29-201ENST00000604817 TRIM66O15016 1216 aa6.75□□□□□ -1.33
IGHV3-29-201ENST00000604817 USP46P62068 366 aa6.75□□□□□ -1.33
IGHV3-29-201ENST00000604817 USB1Q9BQ65 265 aaKnown RBP6.75□□□□□ -1.33
IGHV3-29-201ENST00000604817 C1orf115Q9H7X2 142 aa6.75□□□□□ -1.33
IGHV3-29-201ENST00000604817 IRF6O14896 467 aa6.74□□□□□ -1.33
IGHV3-29-201ENST00000604817 WIPF1O43516 503 aa6.74□□□□□ -1.33
IGHV3-29-201ENST00000604817 CD46P15529 392 aa6.74□□□□□ -1.33
IGHV3-29-201ENST00000604817 SMPD1P17405 629 aa6.74□□□□□ -1.33
IGHV3-29-201ENST00000604817 INSM1Q01101 510 aaPredicted RBP6.74□□□□□ -1.33
IGHV3-29-201ENST00000604817 PDE4DQ08499 809 aa6.74□□□□□ -1.33
IGHV3-29-201ENST00000604817 STK17AQ9UEE5 414 aa6.74□□□□□ -1.33
IGHV3-29-201ENST00000604817 KDM4AO75164 1064 aa6.73□□□□□ -1.33
IGHV3-29-201ENST00000604817 DXOO77932 396 aaKnown RBP6.73□□□□□ -1.33
IGHV3-29-201ENST00000604817 NFX1Q12986 1120 aaKnown RBP6.73□□□□□ -1.33
IGHV3-29-201ENST00000604817 KIFC2Q96AC6 838 aa6.73□□□□□ -1.33
IGHV3-29-201ENST00000604817 MRGPRX2Q96LB1 330 aa6.73□□□□□ -1.33
IGHV3-29-201ENST00000604817 ATP13A2Q9NQ11 1180 aa6.73□□□□□ -1.33
IGHV3-29-201ENST00000604817 WNT7BP56706 349 aa6.72□□□□□ -1.33
IGHV3-29-201ENST00000604817 TRIM47Q96LD4 638 aa6.72□□□□□ -1.33
IGHV3-29-201ENST00000604817 AMHR2Q16671 573 aa6.71□□□□□ -1.34
IGHV3-29-201ENST00000604817 CCDC102AQ96A19 550 aa6.71□□□□□ -1.34
IGHV3-29-201ENST00000604817 ARID3AQ99856 593 aa6.71□□□□□ -1.34
IGHV3-29-201ENST00000604817 KDM4CQ9H3R0 1056 aa6.71□□□□□ -1.34
IGHV3-29-201ENST00000604817 J3QL48 77 aa6.69□□□□□ -1.34
IGHV3-29-201ENST00000604817 CCDC24Q8N4L8 307 aa6.69□□□□□ -1.34
IGHV3-29-201ENST00000604817 RB1CC1Q8TDY2 1594 aa6.69□□□□□ -1.34
IGHV3-29-201ENST00000604817 TERTO14746 1132 aaKnown RBP6.68□□□□□ -1.34
IGHV3-29-201ENST00000604817 RC3H1Q5TC82 1133 aaKnown RBP6.68□□□□□ -1.34
IGHV3-29-201ENST00000604817 IL27Q8NEV9 243 aa6.68□□□□□ -1.34
IGHV3-29-201ENST00000604817 DDRGK1Q96HY6 314 aa6.68□□□□□ -1.34
IGHV3-29-201ENST00000604817 GPBP1L1Q9HC44 474 aaPredicted RBP6.68□□□□□ -1.34
IGHV3-29-201ENST00000604817 HOXA2O43364 376 aa6.67□□□□□ -1.34
IGHV3-29-201ENST00000604817 SNRPBP14678 240 aaKnown RBP6.67□□□□□ -1.34
IGHV3-29-201ENST00000604817 JUNDP17535 347 aa6.67□□□□□ -1.34
IGHV3-29-201ENST00000604817 HPS1Q92902 700 aa6.67□□□□□ -1.34
IGHV3-29-201ENST00000604817 MDM2Q00987 491 aaPredicted RBP6.65□□□□□ -1.34
IGHV3-29-201ENST00000604817 SLC16A10Q8TF71 515 aa6.65□□□□□ -1.34
IGHV3-29-201ENST00000604817 CLCN1P35523 988 aa6.64□□□□□ -1.35
IGHV3-29-201ENST00000604817 SKOR1P84550 965 aa6.64□□□□□ -1.35
IGHV3-29-201ENST00000604817 TTLL12Q14166 644 aaPredicted RBP6.64□□□□□ -1.35
IGHV3-29-201ENST00000604817 RETREG3Q86VR2 466 aa6.64□□□□□ -1.35
IGHV3-29-201ENST00000604817 PARP9Q8IXQ6 854 aa6.64□□□□□ -1.35
IGHV3-29-201ENST00000604817 CCDC9Q9Y3X0 531 aaKnown RBP6.64□□□□□ -1.35
IGHV3-29-201ENST00000604817 FAM181BA6NEQ2 426 aa6.63□□□□□ -1.35
IGHV3-29-201ENST00000604817 ARID3CA6NKF2 412 aa6.63□□□□□ -1.35
IGHV3-29-201ENST00000604817 ALDH1A1P00352 501 aa6.63□□□□□ -1.35
IGHV3-29-201ENST00000604817 NPAS3Q8IXF0 933 aa6.63□□□□□ -1.35
IGHV3-29-201ENST00000604817 EHBP1Q8NDI1 1231 aa6.63□□□□□ -1.35
IGHV3-29-201ENST00000604817 NUDT12Q9BQG2 462 aa6.63□□□□□ -1.35
IGHV3-29-201ENST00000604817 GPCPD1Q9NPB8 672 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms