RNA–Protein interactions for RNA: ENST00000604814.5

TUBE1-209, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-209ENST00000604814 POM121Q96HA1 1249 aa8.18□□□□□ -1.1
TUBE1-209ENST00000604814 KMT5BQ4FZB7 885 aa8.17□□□□□ -1.1
TUBE1-209ENST00000604814 PATL2C9JE40 543 aaKnown RBP8.17□□□□□ -1.1
TUBE1-209ENST00000604814 CFHP08603 1231 aa8.17□□□□□ -1.1
TUBE1-209ENST00000604814 APLP1P51693 650 aa8.17□□□□□ -1.1
TUBE1-209ENST00000604814 AMHR2Q16671 573 aa8.17□□□□□ -1.1
TUBE1-209ENST00000604814 PCMTD1Q96MG8 357 aaPredicted RBP8.17□□□□□ -1.1
TUBE1-209ENST00000604814 PRR14Q9BWN1 585 aa8.17□□□□□ -1.1
TUBE1-209ENST00000604814 AMOTL2Q9Y2J4 779 aa8.17□□□□□ -1.1
TUBE1-209ENST00000604814 PARP9Q8IXQ6 854 aa8.16□□□□□ -1.1
TUBE1-209ENST00000604814 POLR3GLQ9BT43 218 aa8.14□□□□□ -1.11
TUBE1-209ENST00000604814 REPIN1Q9BWE0 567 aaKnown RBP8.14□□□□□ -1.11
TUBE1-209ENST00000604814 PDE4CQ08493 712 aa8.13□□□□□ -1.11
TUBE1-209ENST00000604814 TMUB1Q9BVT8 246 aa8.13□□□□□ -1.11
TUBE1-209ENST00000604814 FAM217BQ9NTX9 383 aaPredicted RBP8.13□□□□□ -1.11
TUBE1-209ENST00000604814 PLA2G2EQ9NZK7 142 aa8.13□□□□□ -1.11
TUBE1-209ENST00000604814 SSTR3P32745 418 aaPredicted RBP8.12□□□□□ -1.11
TUBE1-209ENST00000604814 GIGYF2Q6Y7W6 1299 aaKnown RBP8.12□□□□□ -1.11
TUBE1-209ENST00000604814 PCDHB3Q9Y5E6 796 aa8.12□□□□□ -1.11
TUBE1-209ENST00000604814 ACTN4O43707 911 aaKnown RBP8.12□□□□□ -1.11
TUBE1-209ENST00000604814 PPP1R15AO75807 674 aaPredicted RBP8.12□□□□□ -1.11
TUBE1-209ENST00000604814 CD46P15529 392 aa8.12□□□□□ -1.11
TUBE1-209ENST00000604814 GCGRP47871 477 aa8.12□□□□□ -1.11
TUBE1-209ENST00000604814 COPS2P61201 443 aa8.11□□□□□ -1.11
TUBE1-209ENST00000604814 CCDC27Q2M243 656 aa8.11□□□□□ -1.11
TUBE1-209ENST00000604814 ACIN1Q9UKV3 1341 aaKnown RBP8.11□□□□□ -1.11
TUBE1-209ENST00000604814 KCNA1Q09470 495 aa8.1□□□□□ -1.11
TUBE1-209ENST00000604814 MTRQ99707 1265 aa8.1□□□□□ -1.11
TUBE1-209ENST00000604814 KCNC4Q03721 635 aa8.1□□□□□ -1.11
TUBE1-209ENST00000604814 DHX37Q8IY37 1157 aaKnown RBP8.09□□□□□ -1.11
TUBE1-209ENST00000604814 IL21Q9HBE4 155 aa8.09□□□□□ -1.11
TUBE1-209ENST00000604814 FUT2Q10981 343 aa8.08□□□□□ -1.12
TUBE1-209ENST00000604814 PUS10Q3MIT2 529 aaKnown RBP8.08□□□□□ -1.12
TUBE1-209ENST00000604814 TJAP1Q5JTD0 557 aa8.08□□□□□ -1.12
TUBE1-209ENST00000604814 BLOC1S3Q6QNY0 202 aa8.08□□□□□ -1.12
TUBE1-209ENST00000604814 NUTM1Q86Y26 1132 aa8.08□□□□□ -1.12
TUBE1-209ENST00000604814 PPM1GO15355 546 aaPredicted RBP8.07□□□□□ -1.12
TUBE1-209ENST00000604814 KDM4AO75164 1064 aa8.07□□□□□ -1.12
TUBE1-209ENST00000604814 BRD1O95696 1058 aa8.07□□□□□ -1.12
TUBE1-209ENST00000604814 ITGBL1O95965 494 aaPredicted RBP8.07□□□□□ -1.12
TUBE1-209ENST00000604814 ATP6V1AP38606 617 aa8.07□□□□□ -1.12
TUBE1-209ENST00000604814 GRIPAP1Q4V328 841 aa8.07□□□□□ -1.12
TUBE1-209ENST00000604814 BEGAINQ9BUH8 593 aa8.07□□□□□ -1.12
TUBE1-209ENST00000604814 ZNF330Q9Y3S2 320 aaPredicted RBP8.07□□□□□ -1.12
TUBE1-209ENST00000604814 ZNF516Q92618 1163 aa8.06□□□□□ -1.12
TUBE1-209ENST00000604814 NR1I2O75469 434 aa8.05□□□□□ -1.12
TUBE1-209ENST00000604814 MS4A1P11836 297 aa8.05□□□□□ -1.12
TUBE1-209ENST00000604814 BRD2P25440 801 aaKnown RBP8.05□□□□□ -1.12
TUBE1-209ENST00000604814 CCDC125Q86Z20 511 aa8.05□□□□□ -1.12
TUBE1-209ENST00000604814 COG6Q9Y2V7 657 aa8.05□□□□□ -1.12
TUBE1-209ENST00000604814 UNCXA6NJT0 531 aa8.04□□□□□ -1.12
TUBE1-209ENST00000604814 ZPR1O75312 459 aa8.04□□□□□ -1.12
TUBE1-209ENST00000604814 USP46P62068 366 aa8.04□□□□□ -1.12
TUBE1-209ENST00000604814 SCUBE3Q8IX30 993 aa8.03□□□□□ -1.12
TUBE1-209ENST00000604814 MORN1Q5T089 497 aa8.02□□□□□ -1.13
TUBE1-209ENST00000604814 SH3D19Q5HYK7 790 aa8.02□□□□□ -1.13
TUBE1-209ENST00000604814 IFFO2Q5TF58 517 aa8.02□□□□□ -1.13
TUBE1-209ENST00000604814 SPIRE2Q8WWL2 714 aa8.02□□□□□ -1.13
TUBE1-209ENST00000604814 SLC27A5Q9Y2P5 690 aa8.02□□□□□ -1.13
TUBE1-209ENST00000604814 NKX2-3Q8TAU0 364 aa8.01□□□□□ -1.13
TUBE1-209ENST00000604814 HOXA2O43364 376 aa8□□□□□ -1.13
TUBE1-209ENST00000604814 SND1Q7KZF4 910 aaKnown RBP eCLIP8□□□□□ -1.13
TUBE1-209ENST00000604814 IVNS1ABPQ9Y6Y0 642 aa8□□□□□ -1.13
TUBE1-209ENST00000604814 TLL1O43897 1013 aa7.99□□□□□ -1.13
TUBE1-209ENST00000604814 DIXDC1Q155Q3 683 aa7.99□□□□□ -1.13
TUBE1-209ENST00000604814 HLA-CQ95604 372 aa7.99□□□□□ -1.13
TUBE1-209ENST00000604814 TBC1D2Q9BYX2 928 aa7.99□□□□□ -1.13
TUBE1-209ENST00000604814 IGSF5Q9NSI5 407 aa7.99□□□□□ -1.13
TUBE1-209ENST00000604814 CALR3Q96L12 384 aaKnown RBP7.99□□□□□ -1.13
TUBE1-209ENST00000604814 ATP1B4Q9UN42 357 aaPredicted RBP7.99□□□□□ -1.13
TUBE1-209ENST00000604814 FMNL1O95466 1100 aaPredicted RBP7.98□□□□□ -1.13
TUBE1-209ENST00000604814 GUCA2AQ02747 115 aa7.98□□□□□ -1.13
TUBE1-209ENST00000604814 Q3C1V9 767 aa7.98□□□□□ -1.13
TUBE1-209ENST00000604814 USTQ9Y2C2 406 aa7.98□□□□□ -1.13
TUBE1-209ENST00000604814 SPDYE5A6NIY4 337 aa7.97□□□□□ -1.13
TUBE1-209ENST00000604814 NDUFV2P19404 249 aa7.97□□□□□ -1.13
TUBE1-209ENST00000604814 SPSB2Q99619 263 aa7.97□□□□□ -1.13
TUBE1-209ENST00000604814 A0A0G2JS52 829 aa7.97□□□□□ -1.13
TUBE1-209ENST00000604814 MOXD2PA6NHM9 499 aa7.97□□□□□ -1.13
TUBE1-209ENST00000604814 ADH1BP00325 375 aa7.97□□□□□ -1.13
TUBE1-209ENST00000604814 FDX1P10109 184 aa7.97□□□□□ -1.13
TUBE1-209ENST00000604814 CSB-PGBD3P0DP91 1061 aa7.96□□□□□ -1.14
TUBE1-209ENST00000604814 GGCXP38435 758 aa7.96□□□□□ -1.14
TUBE1-209ENST00000604814 CWC22Q9HCG8 908 aaKnown RBP7.96□□□□□ -1.14
TUBE1-209ENST00000604814 BRICD5Q6PL45 260 aa7.95□□□□□ -1.14
TUBE1-209ENST00000604814 CANXP27824 592 aaKnown RBP7.94□□□□□ -1.14
TUBE1-209ENST00000604814 PPP1R18Q6NYC8 613 aa7.94□□□□□ -1.14
TUBE1-209ENST00000604814 RNF19BQ6ZMZ0 732 aa7.94□□□□□ -1.14
TUBE1-209ENST00000604814 FAM9AQ8IZU1 332 aaPredicted RBP7.94□□□□□ -1.14
TUBE1-209ENST00000604814 PBXIP1Q96AQ6 731 aa7.94□□□□□ -1.14
TUBE1-209ENST00000604814 THAP11Q96EK4 314 aa7.94□□□□□ -1.14
TUBE1-209ENST00000604814 SLC6A16Q9GZN6 736 aa7.94□□□□□ -1.14
TUBE1-209ENST00000604814 SALL2Q9Y467 1007 aaPredicted RBP7.94□□□□□ -1.14
TUBE1-209ENST00000604814 SKIV2LQ15477 1246 aaKnown RBP7.94□□□□□ -1.14
TUBE1-209ENST00000604814 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.94□□□□□ -1.14
TUBE1-209ENST00000604814 CARNS1A5YM72 827 aa7.93□□□□□ -1.14
TUBE1-209ENST00000604814 C6orf229H3BNL8 230 aa7.93□□□□□ -1.14
TUBE1-209ENST00000604814 S1PR4O95977 384 aa7.93□□□□□ -1.14
TUBE1-209ENST00000604814 MYSM1Q5VVJ2 828 aa7.93□□□□□ -1.14
TUBE1-209ENST00000604814 RIC3Q7Z5B4 369 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms