RNA–Protein interactions for RNA: ENST00000602868.1

SFXN2-213, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-213ENST00000602868 SETD1AO15047 1707 aaKnown RBP18.73■□□□□ 0.59
SFXN2-213ENST00000602868 LAMC1P11047 1609 aa18.73■□□□□ 0.59
SFXN2-213ENST00000602868 C8orf37Q96NL8 207 aa18.72■□□□□ 0.59
SFXN2-213ENST00000602868 LRPPRCP42704 1394 aaKnown RBP18.7■□□□□ 0.58
SFXN2-213ENST00000602868 NALCNQ8IZF0 1738 aa18.7■□□□□ 0.58
SFXN2-213ENST00000602868 SIRT1Q96EB6 747 aa18.7■□□□□ 0.58
SFXN2-213ENST00000602868 NPHP3Q7Z494 1330 aa18.7■□□□□ 0.58
SFXN2-213ENST00000602868 ROBO2Q9HCK4 1378 aa18.69■□□□□ 0.58
SFXN2-213ENST00000602868 NRXN1Q9ULB1 1477 aa18.69■□□□□ 0.58
SFXN2-213ENST00000602868 DCAF11Q8TEB1 546 aa18.68■□□□□ 0.58
SFXN2-213ENST00000602868 TRPC5Q9UL62 973 aaPredicted RBP18.68■□□□□ 0.58
SFXN2-213ENST00000602868 PIK3C2GO75747 1445 aa18.67■□□□□ 0.58
SFXN2-213ENST00000602868 DHX57Q6P158 1386 aaKnown RBP18.67■□□□□ 0.58
SFXN2-213ENST00000602868 MYOM2P54296 1465 aa18.66■□□□□ 0.58
SFXN2-213ENST00000602868 FNBP4Q8N3X1 1017 aaPredicted RBP18.66■□□□□ 0.58
SFXN2-213ENST00000602868 ABCC11Q96J66 1382 aa18.66■□□□□ 0.58
SFXN2-213ENST00000602868 ORAI2Q96SN7 254 aa18.65■□□□□ 0.58
SFXN2-213ENST00000602868 USP21Q9UK80 565 aa18.65■□□□□ 0.58
SFXN2-213ENST00000602868 ADAMTS2O95450 1211 aa18.64■□□□□ 0.57
SFXN2-213ENST00000602868 CFAP70Q5T0N1 1121 aa18.64■□□□□ 0.57
SFXN2-213ENST00000602868 DDX17Q92841 729 aaKnown RBP18.64■□□□□ 0.57
SFXN2-213ENST00000602868 KDM2AQ9Y2K7 1162 aa18.64■□□□□ 0.57
SFXN2-213ENST00000602868 ATAD2Q6PL18 1390 aa18.64■□□□□ 0.57
SFXN2-213ENST00000602868 PPLO60437 1756 aa18.63■□□□□ 0.57
SFXN2-213ENST00000602868 ESCO1Q5FWF5 840 aa18.63■□□□□ 0.57
SFXN2-213ENST00000602868 CDC42BPGQ6DT37 1551 aa18.63■□□□□ 0.57
SFXN2-213ENST00000602868 TMEM132EQ6IEE7 984 aa18.62■□□□□ 0.57
SFXN2-213ENST00000602868 CCDC125Q86Z20 511 aa18.62■□□□□ 0.57
SFXN2-213ENST00000602868 TECPR2O15040 1411 aa18.62■□□□□ 0.57
SFXN2-213ENST00000602868 RGS12O14924 1447 aa18.61■□□□□ 0.57
SFXN2-213ENST00000602868 COL22A1Q8NFW1 1626 aaPredicted RBP18.6■□□□□ 0.57
SFXN2-213ENST00000602868 SIN3AQ96ST3 1273 aa18.59■□□□□ 0.57
SFXN2-213ENST00000602868 L3MBTL2Q969R5 705 aa18.57■□□□□ 0.56
SFXN2-213ENST00000602868 STK26Q9P289 416 aa18.57■□□□□ 0.56
SFXN2-213ENST00000602868 YTHDC2Q9H6S0 1430 aaKnown RBP18.57■□□□□ 0.56
SFXN2-213ENST00000602868 FOXO3O43524 673 aa18.56■□□□□ 0.56
SFXN2-213ENST00000602868 ATRNO75882 1429 aa18.56■□□□□ 0.56
SFXN2-213ENST00000602868 PXDNQ92626 1479 aa18.54■□□□□ 0.56
SFXN2-213ENST00000602868 PSME1Q06323 249 aa18.54■□□□□ 0.56
SFXN2-213ENST00000602868 WAPLQ7Z5K2 1190 aa18.54■□□□□ 0.56
SFXN2-213ENST00000602868 IFT172Q9UG01 1749 aa18.54■□□□□ 0.56
SFXN2-213ENST00000602868 NEUROD1Q13562 356 aa18.53■□□□□ 0.56
SFXN2-213ENST00000602868 GJD4Q96KN9 370 aaPredicted RBP18.51■□□□□ 0.55
SFXN2-213ENST00000602868 PCGF6Q9BYE7 350 aa18.51■□□□□ 0.55
SFXN2-213ENST00000602868 KNDC1Q76NI1 1749 aa18.51■□□□□ 0.55
SFXN2-213ENST00000602868 KIF1AQ12756 1690 aa18.5■□□□□ 0.55
SFXN2-213ENST00000602868 SPATA31A3Q5VYP0 1347 aa18.49■□□□□ 0.55
SFXN2-213ENST00000602868 UNC5CLQ8IV45 518 aa18.49■□□□□ 0.55
SFXN2-213ENST00000602868 ZRANB1Q9UGI0 708 aa18.49■□□□□ 0.55
SFXN2-213ENST00000602868 BCL9LQ86UU0 1499 aa18.49■□□□□ 0.55
SFXN2-213ENST00000602868 PRAM1Q96QH2 718 aa18.48■□□□□ 0.55
SFXN2-213ENST00000602868 ADGRB1O14514 1584 aa18.47■□□□□ 0.55
SFXN2-213ENST00000602868 PLEKHH1Q9ULM0 1364 aa18.47■□□□□ 0.55
SFXN2-213ENST00000602868 KRT28Q7Z3Y7 464 aa18.47■□□□□ 0.55
SFXN2-213ENST00000602868 TRAK1Q9UPV9 953 aa18.47■□□□□ 0.55
SFXN2-213ENST00000602868 CLSPNQ9HAW4 1339 aa18.47■□□□□ 0.55
SFXN2-213ENST00000602868 MARF1Q9Y4F3 1742 aaKnown RBP18.46■□□□□ 0.55
SFXN2-213ENST00000602868 POGKQ9P215 609 aa18.46■□□□□ 0.55
SFXN2-213ENST00000602868 PHF8Q9UPP1 1060 aa18.46■□□□□ 0.55
SFXN2-213ENST00000602868 ARHGEF10O15013 1369 aa18.45■□□□□ 0.54
SFXN2-213ENST00000602868 HAP1P54257 671 aaPredicted RBP18.45■□□□□ 0.54
SFXN2-213ENST00000602868 NBPF1Q3BBV0 1214 aa18.45■□□□□ 0.54
SFXN2-213ENST00000602868 DLC1Q96QB1 1528 aa18.44■□□□□ 0.54
SFXN2-213ENST00000602868 SBNO1A3KN83 1393 aa18.44■□□□□ 0.54
SFXN2-213ENST00000602868 EIF3AQ14152 1382 aaKnown RBP18.44■□□□□ 0.54
SFXN2-213ENST00000602868 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.44■□□□□ 0.54
SFXN2-213ENST00000602868 XPCQ01831 940 aaPredicted RBP18.44■□□□□ 0.54
SFXN2-213ENST00000602868 FMN2Q9NZ56 1722 aa18.43■□□□□ 0.54
SFXN2-213ENST00000602868 NUTM2FA1L443 756 aa18.43■□□□□ 0.54
SFXN2-213ENST00000602868 TIMELESSQ9UNS1 1208 aa18.43■□□□□ 0.54
SFXN2-213ENST00000602868 SLIT2O94813 1529 aa18.43■□□□□ 0.54
SFXN2-213ENST00000602868 TNS3Q68CZ2 1445 aa18.41■□□□□ 0.54
SFXN2-213ENST00000602868 ANKARQ7Z5J8 1434 aa18.41■□□□□ 0.54
SFXN2-213ENST00000602868 SF3B2Q13435 895 aaKnown RBP18.4■□□□□ 0.54
SFXN2-213ENST00000602868 VPS72Q15906 364 aa18.4■□□□□ 0.54
SFXN2-213ENST00000602868 BLMP54132 1417 aaPredicted RBP18.4■□□□□ 0.54
SFXN2-213ENST00000602868 NBPF8Q3BBV2 869 aa18.39■□□□□ 0.53
SFXN2-213ENST00000602868 ONECUT3O60422 494 aaPredicted RBP18.38■□□□□ 0.53
SFXN2-213ENST00000602868 TONSLQ96HA7 1378 aa18.38■□□□□ 0.53
SFXN2-213ENST00000602868 RALGAPBQ86X10 1494 aa18.38■□□□□ 0.53
SFXN2-213ENST00000602868 USP32Q8NFA0 1604 aa18.38■□□□□ 0.53
SFXN2-213ENST00000602868 WASLO00401 505 aaPredicted RBP18.37■□□□□ 0.53
SFXN2-213ENST00000602868 SAFB2Q14151 953 aaKnown RBP eCLIP18.37■□□□□ 0.53
SFXN2-213ENST00000602868 GPRASP1Q5JY77 1395 aa18.36■□□□□ 0.53
SFXN2-213ENST00000602868 NWD2Q9ULI1 1742 aa18.34■□□□□ 0.53
SFXN2-213ENST00000602868 MINK1Q8N4C8 1332 aaPredicted RBP18.33■□□□□ 0.53
SFXN2-213ENST00000602868 LMOD2Q6P5Q4 547 aa18.33■□□□□ 0.52
SFXN2-213ENST00000602868 SEPT12Q8IYM1 358 aa18.33■□□□□ 0.52
SFXN2-213ENST00000602868 KIAA1210Q9ULL0 1709 aa18.32■□□□□ 0.52
SFXN2-213ENST00000602868 CCDC9Q9Y3X0 531 aaKnown RBP18.32■□□□□ 0.52
SFXN2-213ENST00000602868 ADGRB2O60241 1585 aa18.32■□□□□ 0.52
SFXN2-213ENST00000602868 GLI3P10071 1580 aa18.31■□□□□ 0.52
SFXN2-213ENST00000602868 KRT27Q7Z3Y8 459 aa18.31■□□□□ 0.52
SFXN2-213ENST00000602868 HIRIP3Q9BW71 556 aaPredicted RBP18.31■□□□□ 0.52
SFXN2-213ENST00000602868 ROCK2O75116 1388 aaKnown RBP18.3■□□□□ 0.52
SFXN2-213ENST00000602868 CENPJQ9HC77 1338 aaPredicted RBP18.3■□□□□ 0.52
SFXN2-213ENST00000602868 CDK19Q9BWU1 502 aa18.29■□□□□ 0.52
SFXN2-213ENST00000602868 CABLES1Q8TDN4 633 aa18.28■□□□□ 0.52
SFXN2-213ENST00000602868 FAM83GA6ND36 823 aa18.27■□□□□ 0.52
SFXN2-213ENST00000602868 PMFBP1Q8TBY8 1022 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms