RNA–Protein interactions for RNA: ENST00000602683.5

PTP4A2-217, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-217ENST00000602683 CTC1Q2NKJ3 1217 aa12.92□□□□□ -0.34
PTP4A2-217ENST00000602683 GMPR2Q9P2T1 348 aaKnown RBP12.92□□□□□ -0.34
PTP4A2-217ENST00000602683 SMCPP49901 116 aaPredicted RBP12.91□□□□□ -0.34
PTP4A2-217ENST00000602683 TTC24A2A3L6 582 aaPredicted RBP12.9□□□□□ -0.34
PTP4A2-217ENST00000602683 MMP16P51512 607 aa12.9□□□□□ -0.34
PTP4A2-217ENST00000602683 WNT7AO00755 349 aa12.89□□□□□ -0.35
PTP4A2-217ENST00000602683 TRIM32Q13049 653 aa12.89□□□□□ -0.35
PTP4A2-217ENST00000602683 Q3C1V9 767 aa12.89□□□□□ -0.35
PTP4A2-217ENST00000602683 C11orf95C9JLR9 678 aaPredicted RBP12.86□□□□□ -0.35
PTP4A2-217ENST00000602683 SMPD1P17405 629 aa12.86□□□□□ -0.35
PTP4A2-217ENST00000602683 MAP2K5Q13163 448 aa12.86□□□□□ -0.35
PTP4A2-217ENST00000602683 KDM4AO75164 1064 aa12.85□□□□□ -0.35
PTP4A2-217ENST00000602683 HLA-CQ95604 372 aa12.85□□□□□ -0.35
PTP4A2-217ENST00000602683 USB1Q9BQ65 265 aaKnown RBP12.85□□□□□ -0.35
PTP4A2-217ENST00000602683 DXOO77932 396 aaKnown RBP12.84□□□□□ -0.35
PTP4A2-217ENST00000602683 SNIP1Q8TAD8 396 aaKnown RBP12.84□□□□□ -0.35
PTP4A2-217ENST00000602683 MRGPRX2Q96LB1 330 aa12.83□□□□□ -0.36
PTP4A2-217ENST00000602683 MDM2Q00987 491 aaPredicted RBP12.82□□□□□ -0.36
PTP4A2-217ENST00000602683 J3QL48 77 aa12.81□□□□□ -0.36
PTP4A2-217ENST00000602683 KDM2AQ9Y2K7 1162 aa12.81□□□□□ -0.36
PTP4A2-217ENST00000602683 IRF6O14896 467 aa12.8□□□□□ -0.36
PTP4A2-217ENST00000602683 WFS1O76024 890 aa12.8□□□□□ -0.36
PTP4A2-217ENST00000602683 HAP1P54257 671 aaPredicted RBP12.79□□□□□ -0.36
PTP4A2-217ENST00000602683 USP46P62068 366 aa12.79□□□□□ -0.36
PTP4A2-217ENST00000602683 ATP13A2Q9NQ11 1180 aa12.79□□□□□ -0.36
PTP4A2-217ENST00000602683 HOXA2O43364 376 aa12.78□□□□□ -0.36
PTP4A2-217ENST00000602683 NFX1Q12986 1120 aaKnown RBP12.77□□□□□ -0.37
PTP4A2-217ENST00000602683 CCDC24Q8N4L8 307 aa12.77□□□□□ -0.37
PTP4A2-217ENST00000602683 SKOR1P84550 965 aa12.76□□□□□ -0.37
PTP4A2-217ENST00000602683 GUCA2AQ02747 115 aa12.76□□□□□ -0.37
PTP4A2-217ENST00000602683 REPIN1Q9BWE0 567 aaKnown RBP12.76□□□□□ -0.37
PTP4A2-217ENST00000602683 MINK1Q8N4C8 1332 aaPredicted RBP12.74□□□□□ -0.37
PTP4A2-217ENST00000602683 SNRPBP14678 240 aaKnown RBP12.74□□□□□ -0.37
PTP4A2-217ENST00000602683 RC3H1Q5TC82 1133 aaKnown RBP12.74□□□□□ -0.37
PTP4A2-217ENST00000602683 HPS1Q92902 700 aa12.74□□□□□ -0.37
PTP4A2-217ENST00000602683 CCDC102AQ96A19 550 aa12.74□□□□□ -0.37
PTP4A2-217ENST00000602683 WNT7BP56706 349 aa12.72□□□□□ -0.37
PTP4A2-217ENST00000602683 SYMPKQ92797 1274 aaKnown RBP12.71□□□□□ -0.37
PTP4A2-217ENST00000602683 TRIM47Q96LD4 638 aa12.71□□□□□ -0.37
PTP4A2-217ENST00000602683 JUNDP17535 347 aa12.7□□□□□ -0.38
PTP4A2-217ENST00000602683 GPCPD1Q9NPB8 672 aa12.7□□□□□ -0.38
PTP4A2-217ENST00000602683 LCE2CQ5TA81 110 aa12.69□□□□□ -0.38
PTP4A2-217ENST00000602683 FAM217BQ9NTX9 383 aaPredicted RBP12.69□□□□□ -0.38
PTP4A2-217ENST00000602683 SENP2Q9HC62 589 aa12.68□□□□□ -0.38
PTP4A2-217ENST00000602683 TULP1O00294 542 aaPredicted RBP12.67□□□□□ -0.38
PTP4A2-217ENST00000602683 WIPF1O43516 503 aa12.67□□□□□ -0.38
PTP4A2-217ENST00000602683 CLCN1P35523 988 aa12.66□□□□□ -0.38
PTP4A2-217ENST00000602683 RETREG3Q86VR2 466 aa12.65□□□□□ -0.38
PTP4A2-217ENST00000602683 TERTO14746 1132 aaKnown RBP12.64□□□□□ -0.39
PTP4A2-217ENST00000602683 ALDH1A1P00352 501 aa12.64□□□□□ -0.39
PTP4A2-217ENST00000602683 PTCRAQ6ISU1 281 aaPredicted RBP12.64□□□□□ -0.39
PTP4A2-217ENST00000602683 NUDT12Q9BQG2 462 aa12.64□□□□□ -0.39
PTP4A2-217ENST00000602683 NUTM1Q86Y26 1132 aa12.63□□□□□ -0.39
PTP4A2-217ENST00000602683 KIFC2Q96AC6 838 aa12.62□□□□□ -0.39
PTP4A2-217ENST00000602683 SIAH2O43255 324 aa12.61□□□□□ -0.39
PTP4A2-217ENST00000602683 PCDHGC3Q9UN70 934 aa12.61□□□□□ -0.39
PTP4A2-217ENST00000602683 STK17AQ9UEE5 414 aa12.6□□□□□ -0.39
PTP4A2-217ENST00000602683 FDX1P10109 184 aa12.59□□□□□ -0.39
PTP4A2-217ENST00000602683 INSM1Q01101 510 aaPredicted RBP12.59□□□□□ -0.39
PTP4A2-217ENST00000602683 EHBP1Q8NDI1 1231 aa12.59□□□□□ -0.39
PTP4A2-217ENST00000602683 KRI1Q8N9T8 703 aaKnown RBP12.57□□□□□ -0.4
PTP4A2-217ENST00000602683 C6orf229H3BNL8 230 aa12.56□□□□□ -0.4
PTP4A2-217ENST00000602683 SH3BP2P78314 561 aa12.56□□□□□ -0.4
PTP4A2-217ENST00000602683 CCNYL3P0C7X3 344 aa12.55□□□□□ -0.4
PTP4A2-217ENST00000602683 MS4A1P11836 297 aa12.55□□□□□ -0.4
PTP4A2-217ENST00000602683 BMP1P13497 986 aa12.55□□□□□ -0.4
PTP4A2-217ENST00000602683 TRIM46Q7Z4K8 759 aa12.54□□□□□ -0.4
PTP4A2-217ENST00000602683 SPIRE2Q8WWL2 714 aa12.53□□□□□ -0.4
PTP4A2-217ENST00000602683 WASF2Q9Y6W5 498 aa12.53□□□□□ -0.4
PTP4A2-217ENST00000602683 SSTR3P32745 418 aaPredicted RBP12.52□□□□□ -0.41
PTP4A2-217ENST00000602683 VSIG10Q8N0Z9 540 aa12.52□□□□□ -0.41
PTP4A2-217ENST00000602683 CAPN5O15484 640 aaPredicted RBP12.51□□□□□ -0.41
PTP4A2-217ENST00000602683 NDUFV2P19404 249 aa12.51□□□□□ -0.41
PTP4A2-217ENST00000602683 PTPRNQ16849 979 aa12.51□□□□□ -0.41
PTP4A2-217ENST00000602683 UNC93B1Q9H1C4 597 aa12.51□□□□□ -0.41
PTP4A2-217ENST00000602683 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.5□□□□□ -0.41
PTP4A2-217ENST00000602683 MOXD2PA6NHM9 499 aa12.49□□□□□ -0.41
PTP4A2-217ENST00000602683 LINC01559Q495D7 138 aa12.49□□□□□ -0.41
PTP4A2-217ENST00000602683 EVA1BQ9NVM1 165 aa12.49□□□□□ -0.41
PTP4A2-217ENST00000602683 NXF1Q9UBU9 619 aaKnown RBP12.48□□□□□ -0.41
PTP4A2-217ENST00000602683 TLL2Q9Y6L7 1015 aa12.48□□□□□ -0.41
PTP4A2-217ENST00000602683 PRR7Q8TB68 274 aa12.47□□□□□ -0.41
PTP4A2-217ENST00000602683 BAP1Q92560 729 aa12.47□□□□□ -0.41
PTP4A2-217ENST00000602683 KCNH2Q12809 1159 aa12.46□□□□□ -0.41
PTP4A2-217ENST00000602683 SLC16A10Q8TF71 515 aa12.45□□□□□ -0.42
PTP4A2-217ENST00000602683 TTLL12Q14166 644 aaPredicted RBP12.44□□□□□ -0.42
PTP4A2-217ENST00000602683 ZNF511Q8NB15 262 aa12.44□□□□□ -0.42
PTP4A2-217ENST00000602683 MTMR2Q13614 643 aa12.43□□□□□ -0.42
PTP4A2-217ENST00000602683 AMHR2Q16671 573 aa12.42□□□□□ -0.42
PTP4A2-217ENST00000602683 GMPRP36959 345 aa12.41□□□□□ -0.42
PTP4A2-217ENST00000602683 VEGFBP49765 207 aa12.41□□□□□ -0.42
PTP4A2-217ENST00000602683 DESI1Q6ICB0 168 aa12.41□□□□□ -0.42
PTP4A2-217ENST00000602683 GIGYF2Q6Y7W6 1299 aaKnown RBP12.41□□□□□ -0.42
PTP4A2-217ENST00000602683 NPAS3Q8IXF0 933 aa12.41□□□□□ -0.42
PTP4A2-217ENST00000602683 ZFP42Q96MM3 310 aa12.41□□□□□ -0.42
PTP4A2-217ENST00000602683 VARSP26640 1264 aaKnown RBP12.4□□□□□ -0.42
PTP4A2-217ENST00000602683 BARGINQ6ZT62 677 aa12.4□□□□□ -0.42
PTP4A2-217ENST00000602683 SPDYE5A6NIY4 337 aa12.39□□□□□ -0.43
PTP4A2-217ENST00000602683 NNTQ13423 1086 aa12.39□□□□□ -0.43
PTP4A2-217ENST00000602683 MPNDQ8N594 471 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms