RNA–Protein interactions for RNA: ENST00000602647.5

SFXN2-207, Transcript of sideroflexin 2, humanhuman

TSL 3

Gene SFXN2, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-207ENST00000602647 UPF1Q92900 1129 aaKnown RBP eCLIP23.74■■□□□ 1.39
SFXN2-207ENST00000602647 NGLY1Q96IV0 654 aa23.74■■□□□ 1.39
SFXN2-207ENST00000602647 STK26Q9P289 416 aa23.74■■□□□ 1.39
SFXN2-207ENST00000602647 ANKRD30BQ9BXX2 1392 aa23.74■■□□□ 1.39
SFXN2-207ENST00000602647 LAMC1P11047 1609 aa23.73■■□□□ 1.39
SFXN2-207ENST00000602647 QTRT2Q9H974 415 aaKnown RBP23.73■■□□□ 1.39
SFXN2-207ENST00000602647 SOS2Q07890 1332 aaPredicted RBP23.73■■□□□ 1.39
SFXN2-207ENST00000602647 CDC42BPGQ6DT37 1551 aa23.73■■□□□ 1.39
SFXN2-207ENST00000602647 ESCO1Q5FWF5 840 aa23.72■■□□□ 1.39
SFXN2-207ENST00000602647 SPATA31E1Q6ZUB1 1445 aa23.71■■□□□ 1.39
SFXN2-207ENST00000602647 NPHP3Q7Z494 1330 aa23.7■■□□□ 1.38
SFXN2-207ENST00000602647 RBM6P78332 1123 aaKnown RBP23.7■■□□□ 1.38
SFXN2-207ENST00000602647 RGS12O14924 1447 aa23.67■■□□□ 1.38
SFXN2-207ENST00000602647 LRPPRCP42704 1394 aaKnown RBP23.67■■□□□ 1.38
SFXN2-207ENST00000602647 NUTM2FA1L443 756 aa23.67■■□□□ 1.38
SFXN2-207ENST00000602647 IFT172Q9UG01 1749 aa23.67■■□□□ 1.38
SFXN2-207ENST00000602647 TECPR2O15040 1411 aa23.67■■□□□ 1.38
SFXN2-207ENST00000602647 TMEM132EQ6IEE7 984 aa23.66■■□□□ 1.38
SFXN2-207ENST00000602647 WAPLQ7Z5K2 1190 aa23.66■■□□□ 1.38
SFXN2-207ENST00000602647 USP21Q9UK80 565 aa23.65■■□□□ 1.38
SFXN2-207ENST00000602647 PIK3C2GO75747 1445 aa23.65■■□□□ 1.38
SFXN2-207ENST00000602647 ABCC11Q96J66 1382 aa23.64■■□□□ 1.37
SFXN2-207ENST00000602647 FOXO3O43524 673 aa23.63■■□□□ 1.37
SFXN2-207ENST00000602647 XPCQ01831 940 aaPredicted RBP23.63■■□□□ 1.37
SFXN2-207ENST00000602647 KNDC1Q76NI1 1749 aa23.62■■□□□ 1.37
SFXN2-207ENST00000602647 COL22A1Q8NFW1 1626 aaPredicted RBP23.62■■□□□ 1.37
SFXN2-207ENST00000602647 YTHDC2Q9H6S0 1430 aaKnown RBP23.61■■□□□ 1.37
SFXN2-207ENST00000602647 TRPC5Q9UL62 973 aaPredicted RBP23.61■■□□□ 1.37
SFXN2-207ENST00000602647 PLEKHH1Q9ULM0 1364 aa23.61■■□□□ 1.37
SFXN2-207ENST00000602647 PXDNQ92626 1479 aa23.61■■□□□ 1.37
SFXN2-207ENST00000602647 MYOM2P54296 1465 aa23.59■■□□□ 1.37
SFXN2-207ENST00000602647 DHX57Q6P158 1386 aaKnown RBP23.58■■□□□ 1.37
SFXN2-207ENST00000602647 FNBP4Q8N3X1 1017 aaPredicted RBP23.57■■□□□ 1.36
SFXN2-207ENST00000602647 FMN2Q9NZ56 1722 aa23.56■■□□□ 1.36
SFXN2-207ENST00000602647 KIF1AQ12756 1690 aa23.54■■□□□ 1.36
SFXN2-207ENST00000602647 ATAD2Q6PL18 1390 aa23.54■■□□□ 1.36
SFXN2-207ENST00000602647 ATRNO75882 1429 aa23.53■■□□□ 1.36
SFXN2-207ENST00000602647 C14orf93Q9H972 538 aaKnown RBP23.53■■□□□ 1.36
SFXN2-207ENST00000602647 CFAP70Q5T0N1 1121 aa23.52■■□□□ 1.36
SFXN2-207ENST00000602647 SAFB2Q14151 953 aaKnown RBP eCLIP23.51■■□□□ 1.35
SFXN2-207ENST00000602647 NRXN1Q9ULB1 1477 aa23.5■■□□□ 1.35
SFXN2-207ENST00000602647 HAP1P54257 671 aaPredicted RBP23.5■■□□□ 1.35
SFXN2-207ENST00000602647 SIRT1Q96EB6 747 aa23.5■■□□□ 1.35
SFXN2-207ENST00000602647 KRT28Q7Z3Y7 464 aa23.49■■□□□ 1.35
SFXN2-207ENST00000602647 MARF1Q9Y4F3 1742 aaKnown RBP23.49■■□□□ 1.35
SFXN2-207ENST00000602647 SPATA31A3Q5VYP0 1347 aa23.49■■□□□ 1.35
SFXN2-207ENST00000602647 PRAM1Q96QH2 718 aa23.48■■□□□ 1.35
SFXN2-207ENST00000602647 POGKQ9P215 609 aa23.48■■□□□ 1.35
SFXN2-207ENST00000602647 PHF8Q9UPP1 1060 aa23.47■■□□□ 1.35
SFXN2-207ENST00000602647 BCL9LQ86UU0 1499 aa23.47■■□□□ 1.35
SFXN2-207ENST00000602647 PSME1Q06323 249 aa23.46■■□□□ 1.35
SFXN2-207ENST00000602647 TNS3Q68CZ2 1445 aa23.45■■□□□ 1.34
SFXN2-207ENST00000602647 PLEKHG5O94827 1062 aa23.45■■□□□ 1.34
SFXN2-207ENST00000602647 LMOD2Q6P5Q4 547 aa23.44■■□□□ 1.34
SFXN2-207ENST00000602647 EP400Q96L91 3159 aa23.44■■□□□ 1.34
SFXN2-207ENST00000602647 GJD4Q96KN9 370 aaPredicted RBP23.43■■□□□ 1.34
SFXN2-207ENST00000602647 USP32Q8NFA0 1604 aa23.42■■□□□ 1.34
SFXN2-207ENST00000602647 DLC1Q96QB1 1528 aa23.42■■□□□ 1.34
SFXN2-207ENST00000602647 UNC5CLQ8IV45 518 aa23.41■■□□□ 1.34
SFXN2-207ENST00000602647 RGPD8O14715 1765 aaPredicted RBP23.41■■□□□ 1.34
SFXN2-207ENST00000602647 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.4■■□□□ 1.34
SFXN2-207ENST00000602647 SIN3AQ96ST3 1273 aa23.4■■□□□ 1.34
SFXN2-207ENST00000602647 SLIT2O94813 1529 aa23.39■■□□□ 1.34
SFXN2-207ENST00000602647 TRAK1Q9UPV9 953 aa23.39■■□□□ 1.33
SFXN2-207ENST00000602647 KDM2AQ9Y2K7 1162 aa23.39■■□□□ 1.33
SFXN2-207ENST00000602647 ARHGEF10O15013 1369 aa23.39■■□□□ 1.33
SFXN2-207ENST00000602647 PMFBP1Q8TBY8 1022 aa23.38■■□□□ 1.33
SFXN2-207ENST00000602647 CABLES1Q8TDN4 633 aa23.38■■□□□ 1.33
SFXN2-207ENST00000602647 ANKARQ7Z5J8 1434 aa23.38■■□□□ 1.33
SFXN2-207ENST00000602647 SBNO1A3KN83 1393 aa23.38■■□□□ 1.33
SFXN2-207ENST00000602647 RALGAPBQ86X10 1494 aa23.37■■□□□ 1.33
SFXN2-207ENST00000602647 NEUROD1Q13562 356 aa23.37■■□□□ 1.33
SFXN2-207ENST00000602647 DCAF11Q8TEB1 546 aa23.37■■□□□ 1.33
SFXN2-207ENST00000602647 HIRIP3Q9BW71 556 aaPredicted RBP23.37■■□□□ 1.33
SFXN2-207ENST00000602647 SRCAPQ6ZRS2 3230 aa23.37■■□□□ 1.33
SFXN2-207ENST00000602647 ADGRB2O60241 1585 aa23.36■■□□□ 1.33
SFXN2-207ENST00000602647 ADGRB1O14514 1584 aa23.35■■□□□ 1.33
SFXN2-207ENST00000602647 MINK1Q8N4C8 1332 aaPredicted RBP23.35■■□□□ 1.33
SFXN2-207ENST00000602647 CCDC9Q9Y3X0 531 aaKnown RBP23.35■■□□□ 1.33
SFXN2-207ENST00000602647 EIF3AQ14152 1382 aaKnown RBP23.35■■□□□ 1.33
SFXN2-207ENST00000602647 GLI3P10071 1580 aa23.33■■□□□ 1.33
SFXN2-207ENST00000602647 GPRASP1Q5JY77 1395 aa23.32■■□□□ 1.32
SFXN2-207ENST00000602647 CCDC125Q86Z20 511 aa23.32■■□□□ 1.32
SFXN2-207ENST00000602647 CCER1Q8TC90 406 aaPredicted RBP23.31■■□□□ 1.32
SFXN2-207ENST00000602647 ZRANB1Q9UGI0 708 aa23.31■■□□□ 1.32
SFXN2-207ENST00000602647 ABCA3Q99758 1704 aa23.3■■□□□ 1.32
SFXN2-207ENST00000602647 PLCH1Q4KWH8 1693 aa23.3■■□□□ 1.32
SFXN2-207ENST00000602647 CLSPNQ9HAW4 1339 aa23.3■■□□□ 1.32
SFXN2-207ENST00000602647 TULP4Q9NRJ4 1543 aa23.29■■□□□ 1.32
SFXN2-207ENST00000602647 VPS72Q15906 364 aa23.29■■□□□ 1.32
SFXN2-207ENST00000602647 STAC3Q96MF2 364 aa23.29■■□□□ 1.32
SFXN2-207ENST00000602647 A0A0G2JS52 829 aa23.28■■□□□ 1.32
SFXN2-207ENST00000602647 MYT1Q01538 1121 aa23.28■■□□□ 1.32
SFXN2-207ENST00000602647 NWD2Q9ULI1 1742 aa23.28■■□□□ 1.32
SFXN2-207ENST00000602647 WASLO00401 505 aaPredicted RBP23.27■■□□□ 1.32
SFXN2-207ENST00000602647 SEPT12Q8IYM1 358 aa23.27■■□□□ 1.32
SFXN2-207ENST00000602647 NGDNQ8NEJ9 315 aaKnown RBP23.27■■□□□ 1.32
SFXN2-207ENST00000602647 PRR36Q9H6K5 1346 aa23.26■■□□□ 1.31
SFXN2-207ENST00000602647 SF3B2Q13435 895 aaKnown RBP23.25■■□□□ 1.31
SFXN2-207ENST00000602647 L3MBTL2Q969R5 705 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms