RNA–Protein interactions for RNA: ENST00000602251.5

LTBP4-231, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-231	ENST00000602251	GJD4	Q96KN9	370 aa	Predicted RBP	28.1	■■■□□ 2.09
LTBP4-231	ENST00000602251	VGF	O15240	615 aa	Predicted RBP	28.09	■■■□□ 2.09
LTBP4-231	ENST00000602251	NPHP3	Q7Z494	1330 aa		28.07	■■■□□ 2.08
LTBP4-231	ENST00000602251	PRAG1	Q86YV5	1406 aa		28.07	■■■□□ 2.08
LTBP4-231	ENST00000602251	ESCO1	Q5FWF5	840 aa		28.06	■■■□□ 2.08
LTBP4-231	ENST00000602251	HFM1	A2PYH4	1435 aa		28.04	■■■□□ 2.08
LTBP4-231	ENST00000602251	FOXO3	O43524	673 aa		28.03	■■■□□ 2.08
LTBP4-231	ENST00000602251	PXDN	Q92626	1479 aa		28.02	■■■□□ 2.08
LTBP4-231	ENST00000602251	KIF1B	O60333	1816 aa		28.02	■■■□□ 2.08
LTBP4-231	ENST00000602251	XPC	Q01831	940 aa	Predicted RBP	28.01	■■■□□ 2.07
LTBP4-231	ENST00000602251	MARF1	Q9Y4F3	1742 aa	Known RBP	27.99	■■■□□ 2.07
LTBP4-231	ENST00000602251	BLM	P54132	1417 aa	Predicted RBP	27.99	■■■□□ 2.07
LTBP4-231	ENST00000602251	RPGRIP1L	Q68CZ1	1315 aa		27.97	■■■□□ 2.07
LTBP4-231	ENST00000602251	UNC5CL	Q8IV45	518 aa		27.97	■■■□□ 2.07
LTBP4-231	ENST00000602251	DEFB132	Q7Z7B7	95 aa		27.95	■■■□□ 2.06
LTBP4-231	ENST00000602251	RALGAPB	Q86X10	1494 aa		27.95	■■■□□ 2.06
LTBP4-231	ENST00000602251	CDC42BPG	Q6DT37	1551 aa		27.94	■■■□□ 2.06
LTBP4-231	ENST00000602251	LRPPRC	P42704	1394 aa	Known RBP	27.94	■■■□□ 2.06
LTBP4-231	ENST00000602251	GLI3	P10071	1580 aa		27.93	■■■□□ 2.06
LTBP4-231	ENST00000602251	SLIT2	O94813	1529 aa		27.92	■■■□□ 2.06
LTBP4-231	ENST00000602251	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	27.92	■■■□□ 2.06
LTBP4-231	ENST00000602251	NUTM2F	A1L443	756 aa		27.91	■■■□□ 2.06
LTBP4-231	ENST00000602251	NAIP	Q13075	1403 aa		27.9	■■■□□ 2.06
LTBP4-231	ENST00000602251	SF3B2	Q13435	895 aa	Known RBP	27.88	■■■□□ 2.05
LTBP4-231	ENST00000602251	SPATA31A3	Q5VYP0	1347 aa		27.88	■■■□□ 2.05
LTBP4-231	ENST00000602251	WAPL	Q7Z5K2	1190 aa		27.87	■■■□□ 2.05
LTBP4-231	ENST00000602251	SEPT12	Q8IYM1	358 aa		27.87	■■■□□ 2.05
LTBP4-231	ENST00000602251	BRWD3	Q6RI45	1802 aa		27.85	■■■□□ 2.05
LTBP4-231	ENST00000602251	PPL	O60437	1756 aa		27.84	■■■□□ 2.05
LTBP4-231	ENST00000602251	STK26	Q9P289	416 aa		27.84	■■■□□ 2.05
LTBP4-231	ENST00000602251	PPARGC1B	Q86YN6	1023 aa	Known RBP	27.83	■■■□□ 2.05
LTBP4-231	ENST00000602251	ONECUT3	O60422	494 aa	Predicted RBP	27.82	■■■□□ 2.04
LTBP4-231	ENST00000602251	VPS72	Q15906	364 aa		27.82	■■■□□ 2.04
LTBP4-231	ENST00000602251	KRT28	Q7Z3Y7	464 aa		27.82	■■■□□ 2.04
LTBP4-231	ENST00000602251	ADGRF5	Q8IZF2	1346 aa		27.8	■■■□□ 2.04
LTBP4-231	ENST00000602251	TECPR2	O15040	1411 aa		27.8	■■■□□ 2.04
LTBP4-231	ENST00000602251	LRP5	O75197	1615 aa		27.79	■■■□□ 2.04
LTBP4-231	ENST00000602251	USP32	Q8NFA0	1604 aa		27.79	■■■□□ 2.04
LTBP4-231	ENST00000602251	CCDC144A	A2RUR9	1427 aa		27.78	■■■□□ 2.04
LTBP4-231	ENST00000602251	KRT27	Q7Z3Y8	459 aa		27.78	■■■□□ 2.04
LTBP4-231	ENST00000602251	PLEKHH1	Q9ULM0	1364 aa		27.77	■■■□□ 2.04
LTBP4-231	ENST00000602251	SLC4A1AP	Q9BWU0	796 aa	Known RBP	27.77	■■■□□ 2.04
LTBP4-231	ENST00000602251	ABCC11	Q96J66	1382 aa		27.76	■■■□□ 2.03
LTBP4-231	ENST00000602251	HAP1	P54257	671 aa	Predicted RBP	27.76	■■■□□ 2.03
LTBP4-231	ENST00000602251	CABLES1	Q8TDN4	633 aa		27.76	■■■□□ 2.03
LTBP4-231	ENST00000602251	CCDC9	Q9Y3X0	531 aa	Known RBP	27.75	■■■□□ 2.03
LTBP4-231	ENST00000602251	PSD	A5PKW4	1024 aa	Predicted RBP	27.74	■■■□□ 2.03
LTBP4-231	ENST00000602251	TMEM132E	Q6IEE7	984 aa		27.74	■■■□□ 2.03
LTBP4-231	ENST00000602251	RRBP1	Q9P2E9	1410 aa	Known RBP	27.73	■■■□□ 2.03
LTBP4-231	ENST00000602251	FMN2	Q9NZ56	1722 aa		27.72	■■■□□ 2.03
LTBP4-231	ENST00000602251	KIF1A	Q12756	1690 aa		27.72	■■■□□ 2.03
LTBP4-231	ENST00000602251	HRC	P23327	699 aa		27.72	■■■□□ 2.03
LTBP4-231	ENST00000602251	PSME1	Q06323	249 aa		27.71	■■■□□ 2.03
LTBP4-231	ENST00000602251	TNS3	Q68CZ2	1445 aa		27.71	■■■□□ 2.03
LTBP4-231	ENST00000602251	PLEKHG5	O94827	1062 aa		27.7	■■■□□ 2.02
LTBP4-231	ENST00000602251	BAG6	P46379	1132 aa		27.7	■■■□□ 2.02
LTBP4-231	ENST00000602251	RGL3	Q3MIN7	710 aa		27.7	■■■□□ 2.02
LTBP4-231	ENST00000602251	PHF8	Q9UPP1	1060 aa		27.7	■■■□□ 2.02
LTBP4-231	ENST00000602251	NWD2	Q9ULI1	1742 aa		27.68	■■■□□ 2.02
LTBP4-231	ENST00000602251	FAM83G	A6ND36	823 aa		27.67	■■■□□ 2.02
LTBP4-231	ENST00000602251	PLCH1	Q4KWH8	1693 aa		27.67	■■■□□ 2.02
LTBP4-231	ENST00000602251	ANKRD30B	Q9BXX2	1392 aa		27.66	■■■□□ 2.02
LTBP4-231	ENST00000602251	SBNO1	A3KN83	1393 aa		27.65	■■■□□ 2.02
LTBP4-231	ENST00000602251	KNDC1	Q76NI1	1749 aa		27.65	■■■□□ 2.02
LTBP4-231	ENST00000602251	LMOD2	Q6P5Q4	547 aa		27.65	■■■□□ 2.02
LTBP4-231	ENST00000602251	SIRT1	Q96EB6	747 aa		27.65	■■■□□ 2.02
LTBP4-231	ENST00000602251		A0A0G2JS52	829 aa		27.64	■■■□□ 2.02
LTBP4-231	ENST00000602251	MYT1	Q01538	1121 aa		27.64	■■■□□ 2.02
LTBP4-231	ENST00000602251	YTHDC2	Q9H6S0	1430 aa	Known RBP	27.64	■■■□□ 2.02
LTBP4-231	ENST00000602251	FAM98C	Q17RN3	349 aa	Known RBP	27.63	■■■□□ 2.01
LTBP4-231	ENST00000602251	SPATA31E1	Q6ZUB1	1445 aa		27.63	■■■□□ 2.01
LTBP4-231	ENST00000602251	ARHGEF10	O15013	1369 aa		27.62	■■■□□ 2.01
LTBP4-231	ENST00000602251	RGPD8	O14715	1765 aa	Predicted RBP	27.61	■■■□□ 2.01
LTBP4-231	ENST00000602251	EN1	Q05925	392 aa	Predicted RBP	27.61	■■■□□ 2.01
LTBP4-231	ENST00000602251	PIK3C2G	O75747	1445 aa		27.6	■■■□□ 2.01
LTBP4-231	ENST00000602251	NRXN1	Q9ULB1	1477 aa		27.59	■■■□□ 2.01
LTBP4-231	ENST00000602251	BTG4	Q9NY30	223 aa		27.58	■■■□□ 2.01
LTBP4-231	ENST00000602251	ABCA3	Q99758	1704 aa		27.58	■■■□□ 2.01
LTBP4-231	ENST00000602251	R3HDM1	Q15032	1099 aa	Known RBP	27.57	■■■□□ 2
LTBP4-231	ENST00000602251	IFT172	Q9UG01	1749 aa		27.57	■■■□□ 2
LTBP4-231	ENST00000602251	FAM182B	Q5T319	152 aa		27.56	■■■□□ 2
LTBP4-231	ENST00000602251	PMFBP1	Q8TBY8	1022 aa		27.54	■■■□□ 2
LTBP4-231	ENST00000602251	C14orf93	Q9H972	538 aa	Known RBP	27.54	■■■□□ 2
LTBP4-231	ENST00000602251	NRAP	Q86VF7	1730 aa		27.53	■■■□□ 2
LTBP4-231	ENST00000602251	SAFB2	Q14151	953 aa	Known RBP eCLIP	27.51	■■□□□ 1.99
LTBP4-231	ENST00000602251	PRAM1	Q96QH2	718 aa		27.5	■■□□□ 1.99
LTBP4-231	ENST00000602251	RGPD1	P0DJD0	1748 aa		27.5	■■□□□ 1.99
LTBP4-231	ENST00000602251	DHX57	Q6P158	1386 aa	Known RBP	27.49	■■□□□ 1.99
LTBP4-231	ENST00000602251	SPATA31A5	Q5VU36	1347 aa		27.49	■■□□□ 1.99
LTBP4-231	ENST00000602251	SPATA31A7	Q8IWB4	1347 aa		27.49	■■□□□ 1.99
LTBP4-231	ENST00000602251	DISP2	A7MBM2	1401 aa		27.49	■■□□□ 1.99
LTBP4-231	ENST00000602251	CFAP70	Q5T0N1	1121 aa		27.48	■■□□□ 1.99
LTBP4-231	ENST00000602251	EZH2	Q15910	746 aa	Known RBP	27.47	■■□□□ 1.99
LTBP4-231	ENST00000602251	MPHOSPH9	Q99550	1183 aa		27.46	■■□□□ 1.99
LTBP4-231	ENST00000602251	ANKAR	Q7Z5J8	1434 aa		27.46	■■□□□ 1.99
LTBP4-231	ENST00000602251	COL14A1	Q05707	1796 aa	Known RBP	27.45	■■□□□ 1.99
LTBP4-231	ENST00000602251	CAMKK2	Q96RR4	588 aa		27.44	■■□□□ 1.98
LTBP4-231	ENST00000602251	TRPM3	Q9HCF6	1732 aa	Predicted RBP	27.42	■■□□□ 1.98
LTBP4-231	ENST00000602251	POGK	Q9P215	609 aa		27.42	■■□□□ 1.98
LTBP4-231	ENST00000602251	TNS1	Q9HBL0	1735 aa	Known RBP	27.41	■■□□□ 1.98

Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms