RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	PXDN	Q92626	1479 aa		27.9	■■■□□ 2.06
IRF3-231	ENST00000602190	NGLY1	Q96IV0	654 aa		27.9	■■■□□ 2.06
IRF3-231	ENST00000602190	ATAD2	Q6PL18	1390 aa		27.88	■■■□□ 2.05
IRF3-231	ENST00000602190	EP400	Q96L91	3159 aa		27.88	■■■□□ 2.05
IRF3-231	ENST00000602190	ADAMTS2	O95450	1211 aa		27.87	■■■□□ 2.05
IRF3-231	ENST00000602190	TECPR2	O15040	1411 aa		27.86	■■■□□ 2.05
IRF3-231	ENST00000602190	TRPC5	Q9UL62	973 aa	Predicted RBP	27.86	■■■□□ 2.05
IRF3-231	ENST00000602190	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	27.86	■■■□□ 2.05
IRF3-231	ENST00000602190	BCL9L	Q86UU0	1499 aa		27.85	■■■□□ 2.05
IRF3-231	ENST00000602190	USP21	Q9UK80	565 aa		27.85	■■■□□ 2.05
IRF3-231	ENST00000602190	IFT172	Q9UG01	1749 aa		27.84	■■■□□ 2.05
IRF3-231	ENST00000602190	KNDC1	Q76NI1	1749 aa		27.83	■■■□□ 2.05
IRF3-231	ENST00000602190	NPHP3	Q7Z494	1330 aa		27.81	■■■□□ 2.04
IRF3-231	ENST00000602190	SPATA31E1	Q6ZUB1	1445 aa		27.75	■■■□□ 2.03
IRF3-231	ENST00000602190	FMN2	Q9NZ56	1722 aa		27.75	■■■□□ 2.03
IRF3-231	ENST00000602190	PPARGC1B	Q86YN6	1023 aa	Known RBP	27.74	■■■□□ 2.03
IRF3-231	ENST00000602190	SLIT2	O94813	1529 aa		27.73	■■■□□ 2.03
IRF3-231	ENST00000602190	KIF1A	Q12756	1690 aa		27.73	■■■□□ 2.03
IRF3-231	ENST00000602190	GLI3	P10071	1580 aa		27.73	■■■□□ 2.03
IRF3-231	ENST00000602190	LRPPRC	P42704	1394 aa	Known RBP	27.73	■■■□□ 2.03
IRF3-231	ENST00000602190	ABCC11	Q96J66	1382 aa		27.72	■■■□□ 2.03
IRF3-231	ENST00000602190	ADGRF5	Q8IZF2	1346 aa		27.7	■■■□□ 2.03
IRF3-231	ENST00000602190	ESCO1	Q5FWF5	840 aa		27.7	■■■□□ 2.02
IRF3-231	ENST00000602190	CCDC125	Q86Z20	511 aa		27.7	■■■□□ 2.02
IRF3-231	ENST00000602190	SLC4A1AP	Q9BWU0	796 aa	Known RBP	27.69	■■■□□ 2.02
IRF3-231	ENST00000602190	PIK3C2G	O75747	1445 aa		27.68	■■■□□ 2.02
IRF3-231	ENST00000602190	USP32	Q8NFA0	1604 aa		27.68	■■■□□ 2.02
IRF3-231	ENST00000602190	GJD4	Q96KN9	370 aa	Predicted RBP	27.68	■■■□□ 2.02
IRF3-231	ENST00000602190	FOXO3	O43524	673 aa		27.67	■■■□□ 2.02
IRF3-231	ENST00000602190	ANKRD30B	Q9BXX2	1392 aa		27.67	■■■□□ 2.02
IRF3-231	ENST00000602190	SPATA31A3	Q5VYP0	1347 aa		27.65	■■■□□ 2.02
IRF3-231	ENST00000602190	BRWD3	Q6RI45	1802 aa		27.64	■■■□□ 2.02
IRF3-231	ENST00000602190	RALGAPB	Q86X10	1494 aa		27.64	■■■□□ 2.02
IRF3-231	ENST00000602190	PLEKHH1	Q9ULM0	1364 aa		27.64	■■■□□ 2.02
IRF3-231	ENST00000602190	CCDC144A	A2RUR9	1427 aa		27.63	■■■□□ 2.01
IRF3-231	ENST00000602190	WAPL	Q7Z5K2	1190 aa		27.62	■■■□□ 2.01
IRF3-231	ENST00000602190	ABCA3	Q99758	1704 aa		27.61	■■■□□ 2.01
IRF3-231	ENST00000602190	NWD2	Q9ULI1	1742 aa		27.61	■■■□□ 2.01
IRF3-231	ENST00000602190	XPC	Q01831	940 aa	Predicted RBP	27.61	■■■□□ 2.01
IRF3-231	ENST00000602190	ZRANB1	Q9UGI0	708 aa		27.61	■■■□□ 2.01
IRF3-231	ENST00000602190	RGPD8	O14715	1765 aa	Predicted RBP	27.6	■■■□□ 2.01
IRF3-231	ENST00000602190	NRXN1	Q9ULB1	1477 aa		27.6	■■■□□ 2.01
IRF3-231	ENST00000602190	FOXD1	Q16676	465 aa		27.6	■■■□□ 2.01
IRF3-231	ENST00000602190	SIRT1	Q96EB6	747 aa		27.6	■■■□□ 2.01
IRF3-231	ENST00000602190	YTHDC2	Q9H6S0	1430 aa	Known RBP	27.59	■■■□□ 2.01
IRF3-231	ENST00000602190	UNC5CL	Q8IV45	518 aa		27.59	■■■□□ 2.01
IRF3-231	ENST00000602190	BLM	P54132	1417 aa	Predicted RBP	27.58	■■■□□ 2.01
IRF3-231	ENST00000602190	PLCH1	Q4KWH8	1693 aa		27.57	■■■□□ 2
IRF3-231	ENST00000602190	TNS3	Q68CZ2	1445 aa		27.55	■■■□□ 2
IRF3-231	ENST00000602190	STK26	Q9P289	416 aa		27.53	■■■□□ 2
IRF3-231	ENST00000602190	ONECUT3	O60422	494 aa	Predicted RBP	27.52	■■■□□ 2
IRF3-231	ENST00000602190	TMEM132E	Q6IEE7	984 aa		27.52	■■■□□ 2
IRF3-231	ENST00000602190	SBNO1	A3KN83	1393 aa		27.51	■■□□□ 1.99
IRF3-231	ENST00000602190	NUTM2F	A1L443	756 aa		27.51	■■□□□ 1.99
IRF3-231	ENST00000602190	LRP5	O75197	1615 aa		27.49	■■□□□ 1.99
IRF3-231	ENST00000602190	ADGRB2	O60241	1585 aa		27.49	■■□□□ 1.99
IRF3-231	ENST00000602190	KRT28	Q7Z3Y7	464 aa		27.49	■■□□□ 1.99
IRF3-231	ENST00000602190	C14orf93	Q9H972	538 aa	Known RBP	27.49	■■□□□ 1.99
IRF3-231	ENST00000602190	NRAP	Q86VF7	1730 aa		27.49	■■□□□ 1.99
IRF3-231	ENST00000602190	VPS72	Q15906	364 aa		27.48	■■□□□ 1.99
IRF3-231	ENST00000602190	RGL3	Q3MIN7	710 aa		27.48	■■□□□ 1.99
IRF3-231	ENST00000602190	DLC1	Q96QB1	1528 aa		27.47	■■□□□ 1.99
IRF3-231	ENST00000602190	TRPM3	Q9HCF6	1732 aa	Predicted RBP	27.47	■■□□□ 1.99
IRF3-231	ENST00000602190	MPHOSPH9	Q99550	1183 aa		27.46	■■□□□ 1.99
IRF3-231	ENST00000602190	PHF8	Q9UPP1	1060 aa		27.45	■■□□□ 1.98
IRF3-231	ENST00000602190	ANKAR	Q7Z5J8	1434 aa		27.44	■■□□□ 1.98
IRF3-231	ENST00000602190	ALS2	Q96Q42	1657 aa		27.43	■■□□□ 1.98
IRF3-231	ENST00000602190	SEPT12	Q8IYM1	358 aa		27.42	■■□□□ 1.98
IRF3-231	ENST00000602190	ARHGEF10	O15013	1369 aa		27.42	■■□□□ 1.98
IRF3-231	ENST00000602190	ADGRB1	O14514	1584 aa		27.41	■■□□□ 1.98
IRF3-231	ENST00000602190	CRYBG1	Q9Y4K1	1723 aa		27.41	■■□□□ 1.98
IRF3-231	ENST00000602190	DEFB132	Q7Z7B7	95 aa		27.4	■■□□□ 1.98
IRF3-231	ENST00000602190	PSME1	Q06323	249 aa		27.39	■■□□□ 1.98
IRF3-231	ENST00000602190	DHX57	Q6P158	1386 aa	Known RBP	27.38	■■□□□ 1.97
IRF3-231	ENST00000602190	CABLES1	Q8TDN4	633 aa		27.37	■■□□□ 1.97
IRF3-231	ENST00000602190	COL14A1	Q05707	1796 aa	Known RBP	27.35	■■□□□ 1.97
IRF3-231	ENST00000602190	CFAP70	Q5T0N1	1121 aa		27.35	■■□□□ 1.97
IRF3-231	ENST00000602190	FAM83G	A6ND36	823 aa		27.33	■■□□□ 1.97
IRF3-231	ENST00000602190	THSD7A	Q9UPZ6	1657 aa		27.33	■■□□□ 1.97
IRF3-231	ENST00000602190	KRT27	Q7Z3Y8	459 aa		27.32	■■□□□ 1.96
IRF3-231	ENST00000602190	PRAM1	Q96QH2	718 aa		27.32	■■□□□ 1.96
IRF3-231	ENST00000602190	ACIN1	Q9UKV3	1341 aa	Known RBP	27.32	■■□□□ 1.96
IRF3-231	ENST00000602190	RGPD1	P0DJD0	1748 aa		27.3	■■□□□ 1.96
IRF3-231	ENST00000602190	TULP4	Q9NRJ4	1543 aa		27.29	■■□□□ 1.96
IRF3-231	ENST00000602190	DISP2	A7MBM2	1401 aa		27.28	■■□□□ 1.96
IRF3-231	ENST00000602190	TNS1	Q9HBL0	1735 aa	Known RBP	27.27	■■□□□ 1.96
IRF3-231	ENST00000602190	HAP1	P54257	671 aa	Predicted RBP	27.27	■■□□□ 1.96
IRF3-231	ENST00000602190	SF3B2	Q13435	895 aa	Known RBP	27.27	■■□□□ 1.96
IRF3-231	ENST00000602190	PRR36	Q9H6K5	1346 aa		27.25	■■□□□ 1.95
IRF3-231	ENST00000602190	PMFBP1	Q8TBY8	1022 aa		27.23	■■□□□ 1.95
IRF3-231	ENST00000602190	EIF3A	Q14152	1382 aa	Known RBP	27.22	■■□□□ 1.95
IRF3-231	ENST00000602190	SAFB2	Q14151	953 aa	Known RBP eCLIP	27.21	■■□□□ 1.95
IRF3-231	ENST00000602190	SPATA31A5	Q5VU36	1347 aa		27.2	■■□□□ 1.95
IRF3-231	ENST00000602190	SPATA31A7	Q8IWB4	1347 aa		27.2	■■□□□ 1.95
IRF3-231	ENST00000602190	BAG6	P46379	1132 aa		27.2	■■□□□ 1.94
IRF3-231	ENST00000602190	BTG4	Q9NY30	223 aa		27.2	■■□□□ 1.94
IRF3-231	ENST00000602190	CCDC9	Q9Y3X0	531 aa	Known RBP	27.2	■■□□□ 1.94
IRF3-231	ENST00000602190	HRC	P23327	699 aa		27.19	■■□□□ 1.94
IRF3-231	ENST00000602190	FAM98C	Q17RN3	349 aa	Known RBP	27.19	■■□□□ 1.94
IRF3-231	ENST00000602190	ITSN1	Q15811	1721 aa		27.19	■■□□□ 1.94

Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms