RNA–Protein interactions for RNA: ENST00000602169.1

CALM3-213, Transcript of calmodulin 3, humanhuman

TSL 2

Gene CALM3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-213ENST00000602169 TMEM94Q12767 1356 aa18.76■□□□□ 0.59
CALM3-213ENST00000602169 SBNO2Q9Y2G9 1366 aa18.76■□□□□ 0.59
CALM3-213ENST00000602169 USP47Q96K76 1375 aa18.75■□□□□ 0.59
CALM3-213ENST00000602169 CENPJQ9HC77 1338 aaPredicted RBP18.74■□□□□ 0.59
CALM3-213ENST00000602169 POGKQ9P215 609 aa18.74■□□□□ 0.59
CALM3-213ENST00000602169 TOM1O60784 492 aa18.73■□□□□ 0.59
CALM3-213ENST00000602169 EIF4G2P78344 907 aaKnown RBP eCLIP18.73■□□□□ 0.59
CALM3-213ENST00000602169 DCCP43146 1447 aa18.73■□□□□ 0.59
CALM3-213ENST00000602169 ADGRL3Q9HAR2 1447 aa18.73■□□□□ 0.59
CALM3-213ENST00000602169 PLEKHH1Q9ULM0 1364 aa18.72■□□□□ 0.59
CALM3-213ENST00000602169 WAPLQ7Z5K2 1190 aa18.72■□□□□ 0.59
CALM3-213ENST00000602169 C19orf44Q9H6X5 657 aa18.72■□□□□ 0.59
CALM3-213ENST00000602169 ARHGEF28Q8N1W1 1705 aaKnown RBP18.71■□□□□ 0.59
CALM3-213ENST00000602169 MSH6P52701 1360 aa18.68■□□□□ 0.58
CALM3-213ENST00000602169 ST20-MTHFSA0A0A6YYL1 179 aa18.68■□□□□ 0.58
CALM3-213ENST00000602169 ADGRB2O60241 1585 aa18.68■□□□□ 0.58
CALM3-213ENST00000602169 TESK2Q96S53 571 aa18.67■□□□□ 0.58
CALM3-213ENST00000602169 CADPS2Q86UW7 1296 aa18.66■□□□□ 0.58
CALM3-213ENST00000602169 PUS7Q96PZ0 661 aaKnown RBP18.66■□□□□ 0.58
CALM3-213ENST00000602169 MED1Q15648 1581 aaPredicted RBP18.66■□□□□ 0.58
CALM3-213ENST00000602169 CDC42BPGQ6DT37 1551 aa18.66■□□□□ 0.58
CALM3-213ENST00000602169 C14orf37Q86TY3 774 aa18.65■□□□□ 0.58
CALM3-213ENST00000602169 HSPA5P11021 654 aaKnown RBP18.64■□□□□ 0.57
CALM3-213ENST00000602169 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.63■□□□□ 0.57
CALM3-213ENST00000602169 WASLO00401 505 aaPredicted RBP18.63■□□□□ 0.57
CALM3-213ENST00000602169 SAFB2Q14151 953 aaKnown RBP eCLIP18.63■□□□□ 0.57
CALM3-213ENST00000602169 EVC2Q86UK5 1308 aa18.63■□□□□ 0.57
CALM3-213ENST00000602169 ATF3P18847 181 aa18.62■□□□□ 0.57
CALM3-213ENST00000602169 MINK1Q8N4C8 1332 aaPredicted RBP18.62■□□□□ 0.57
CALM3-213ENST00000602169 NALCNQ8IZF0 1738 aa18.6■□□□□ 0.57
CALM3-213ENST00000602169 QRICH2Q9H0J4 1663 aa18.6■□□□□ 0.57
CALM3-213ENST00000602169 ANKARQ7Z5J8 1434 aa18.6■□□□□ 0.57
CALM3-213ENST00000602169 TMF1P82094 1093 aa18.6■□□□□ 0.57
CALM3-213ENST00000602169 CDCA8Q53HL2 280 aa18.6■□□□□ 0.57
CALM3-213ENST00000602169 ROBO1Q9Y6N7 1651 aa18.58■□□□□ 0.57
CALM3-213ENST00000602169 HIRIP3Q9BW71 556 aaPredicted RBP18.58■□□□□ 0.56
CALM3-213ENST00000602169 CDK19Q9BWU1 502 aa18.58■□□□□ 0.56
CALM3-213ENST00000602169 TULP4Q9NRJ4 1543 aa18.57■□□□□ 0.56
CALM3-213ENST00000602169 MST1RQ04912 1400 aa18.57■□□□□ 0.56
CALM3-213ENST00000602169 ATAD2Q6PL18 1390 aa18.55■□□□□ 0.56
CALM3-213ENST00000602169 SLAIN2Q9P270 581 aa18.55■□□□□ 0.56
CALM3-213ENST00000602169 C1orf167Q5SNV9 1468 aa18.53■□□□□ 0.56
CALM3-213ENST00000602169 SRPK2P78362 688 aaKnown RBP18.53■□□□□ 0.56
CALM3-213ENST00000602169 FMN2Q9NZ56 1722 aa18.53■□□□□ 0.56
CALM3-213ENST00000602169 CCDC61Q9Y6R9 512 aa18.53■□□□□ 0.56
CALM3-213ENST00000602169 NINLQ9Y2I6 1382 aa18.53■□□□□ 0.56
CALM3-213ENST00000602169 ATP7BP35670 1465 aa18.52■□□□□ 0.56
CALM3-213ENST00000602169 NUDT16Q96DE0 195 aaKnown RBP18.52■□□□□ 0.56
CALM3-213ENST00000602169 PRR36Q9H6K5 1346 aa18.5■□□□□ 0.55
CALM3-213ENST00000602169 CABP2Q9NPB3 220 aa18.5■□□□□ 0.55
CALM3-213ENST00000602169 PLEKHG3A1L390 1219 aa18.49■□□□□ 0.55
CALM3-213ENST00000602169 SOCS7O14512 581 aa18.48■□□□□ 0.55
CALM3-213ENST00000602169 PHF23Q9BUL5 403 aaPredicted RBP18.47■□□□□ 0.55
CALM3-213ENST00000602169 PHLPP1O60346 1717 aa18.46■□□□□ 0.55
CALM3-213ENST00000602169 USP32Q8NFA0 1604 aa18.46■□□□□ 0.55
CALM3-213ENST00000602169 BRINP3Q76B58 766 aa18.46■□□□□ 0.55
CALM3-213ENST00000602169 POLR3AO14802 1390 aaPredicted RBP18.45■□□□□ 0.54
CALM3-213ENST00000602169 C11orf95C9JLR9 678 aaPredicted RBP18.45■□□□□ 0.54
CALM3-213ENST00000602169 ESCO1Q5FWF5 840 aa18.45■□□□□ 0.54
CALM3-213ENST00000602169 PHF8Q9UPP1 1060 aa18.45■□□□□ 0.54
CALM3-213ENST00000602169 KIF7Q2M1P5 1343 aa18.45■□□□□ 0.54
CALM3-213ENST00000602169 PPIP5K1Q6PFW1 1433 aa18.44■□□□□ 0.54
CALM3-213ENST00000602169 ORAI2Q96SN7 254 aa18.44■□□□□ 0.54
CALM3-213ENST00000602169 CCDC7Q96M83 1385 aa18.43■□□□□ 0.54
CALM3-213ENST00000602169 NUTM2FA1L443 756 aa18.43■□□□□ 0.54
CALM3-213ENST00000602169 CABP1Q9NZU7 370 aa18.43■□□□□ 0.54
CALM3-213ENST00000602169 TOPAZ1Q8N9V7 1692 aa18.43■□□□□ 0.54
CALM3-213ENST00000602169 WASHC2AQ641Q2 1341 aa18.43■□□□□ 0.54
CALM3-213ENST00000602169 BRD4O60885 1362 aaPredicted RBP18.42■□□□□ 0.54
CALM3-213ENST00000602169 KIF1AQ12756 1690 aa18.42■□□□□ 0.54
CALM3-213ENST00000602169 ZNF692Q9BU19 519 aaPredicted RBP18.42■□□□□ 0.54
CALM3-213ENST00000602169 ITSN1Q15811 1721 aa18.42■□□□□ 0.54
CALM3-213ENST00000602169 NPHP3Q7Z494 1330 aa18.42■□□□□ 0.54
CALM3-213ENST00000602169 CPSF1Q10570 1443 aaKnown RBP18.4■□□□□ 0.54
CALM3-213ENST00000602169 TERF2IPQ9NYB0 399 aa18.4■□□□□ 0.54
CALM3-213ENST00000602169 COL16A1Q07092 1604 aaPredicted RBP18.4■□□□□ 0.54
CALM3-213ENST00000602169 ACEP12821 1306 aa18.39■□□□□ 0.53
CALM3-213ENST00000602169 NGDNQ8NEJ9 315 aaKnown RBP18.38■□□□□ 0.53
CALM3-213ENST00000602169 SLC12A5Q9H2X9 1139 aa18.38■□□□□ 0.53
CALM3-213ENST00000602169 ANKRD36BQ8N2N9 1353 aa18.38■□□□□ 0.53
CALM3-213ENST00000602169 AHDC1Q5TGY3 1603 aaPredicted RBP18.38■□□□□ 0.53
CALM3-213ENST00000602169 FOXO3O43524 673 aa18.37■□□□□ 0.53
CALM3-213ENST00000602169 TMC1Q8TDI8 760 aa18.37■□□□□ 0.53
CALM3-213ENST00000602169 RGS17Q9UGC6 210 aaPredicted RBP18.37■□□□□ 0.53
CALM3-213ENST00000602169 SOS2Q07890 1332 aaPredicted RBP18.37■□□□□ 0.53
CALM3-213ENST00000602169 CD163L1Q9NR16 1453 aa18.37■□□□□ 0.53
CALM3-213ENST00000602169 ZNF316A6NFI3 1004 aaPredicted RBP18.36■□□□□ 0.53
CALM3-213ENST00000602169 PSME1Q06323 249 aa18.36■□□□□ 0.53
CALM3-213ENST00000602169 HDGFL2Q7Z4V5 671 aaPredicted RBP18.36■□□□□ 0.53
CALM3-213ENST00000602169 PMFBP1Q8TBY8 1022 aa18.36■□□□□ 0.53
CALM3-213ENST00000602169 PXDNQ92626 1479 aa18.34■□□□□ 0.53
CALM3-213ENST00000602169 USP6P35125 1406 aa18.34■□□□□ 0.53
CALM3-213ENST00000602169 SSH2Q76I76 1423 aa18.34■□□□□ 0.53
CALM3-213ENST00000602169 A0A1W2PP64 1363 aa18.34■□□□□ 0.53
CALM3-213ENST00000602169 SBNO1A3KN83 1393 aa18.34■□□□□ 0.53
CALM3-213ENST00000602169 NHSL1Q5SYE7 1610 aa18.33■□□□□ 0.52
CALM3-213ENST00000602169 KTN1Q86UP2 1357 aaKnown RBP18.32■□□□□ 0.52
CALM3-213ENST00000602169 LRP6O75581 1613 aa18.32■□□□□ 0.52
CALM3-213ENST00000602169 KRT28Q7Z3Y7 464 aa18.32■□□□□ 0.52
CALM3-213ENST00000602169 RGPD8O14715 1765 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms