RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 XRN1Q8IZH2 1706 aaKnown RBP24.23■■□□□ 1.47
DDX49-213ENST00000602113 PTCH1Q13635 1447 aa24.2■■□□□ 1.46
DDX49-213ENST00000602113 EVC2Q86UK5 1308 aa24.19■■□□□ 1.46
DDX49-213ENST00000602113 KCNA6P17658 529 aa24.19■■□□□ 1.46
DDX49-213ENST00000602113 CHD2O14647 1828 aaKnown RBP24.18■■□□□ 1.46
DDX49-213ENST00000602113 STRCQ7RTU9 1775 aa24.17■■□□□ 1.46
DDX49-213ENST00000602113 PUS7Q96PZ0 661 aaKnown RBP24.15■■□□□ 1.46
DDX49-213ENST00000602113 MYOM1P52179 1685 aa24.14■■□□□ 1.45
DDX49-213ENST00000602113 CABP2Q9NPB3 220 aa24.14■■□□□ 1.45
DDX49-213ENST00000602113 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.13■■□□□ 1.45
DDX49-213ENST00000602113 MIER1Q8N108 512 aa24.13■■□□□ 1.45
DDX49-213ENST00000602113 CDK19Q9BWU1 502 aa24.12■■□□□ 1.45
DDX49-213ENST00000602113 NWD1Q149M9 1564 aa24.11■■□□□ 1.45
DDX49-213ENST00000602113 SRPK2P78362 688 aaKnown RBP24.1■■□□□ 1.45
DDX49-213ENST00000602113 WASLO00401 505 aaPredicted RBP24.09■■□□□ 1.45
DDX49-213ENST00000602113 PANK3Q9H999 370 aa24.09■■□□□ 1.45
DDX49-213ENST00000602113 ADGRB2O60241 1585 aa24.09■■□□□ 1.45
DDX49-213ENST00000602113 SLC12A5Q9H2X9 1139 aa24.05■■□□□ 1.44
DDX49-213ENST00000602113 ATAD2Q6PL18 1390 aa24.05■■□□□ 1.44
DDX49-213ENST00000602113 PER1O15534 1290 aaPredicted RBP24.05■■□□□ 1.44
DDX49-213ENST00000602113 TMC1Q8TDI8 760 aa24.04■■□□□ 1.44
DDX49-213ENST00000602113 ANP32CO43423 234 aa24.02■■□□□ 1.44
DDX49-213ENST00000602113 RBM33Q96EV2 1170 aaKnown RBP24.02■■□□□ 1.44
DDX49-213ENST00000602113 NKTRP30414 1462 aaKnown RBP24.02■■□□□ 1.44
DDX49-213ENST00000602113 STRCP1A6NGW2 1772 aa24.01■■□□□ 1.43
DDX49-213ENST00000602113 NINLQ9Y2I6 1382 aa23.99■■□□□ 1.43
DDX49-213ENST00000602113 PRR36Q9H6K5 1346 aa23.99■■□□□ 1.43
DDX49-213ENST00000602113 NUDT16Q96DE0 195 aaKnown RBP23.99■■□□□ 1.43
DDX49-213ENST00000602113 CARD14Q9BXL6 1004 aa23.99■■□□□ 1.43
DDX49-213ENST00000602113 NALCNQ8IZF0 1738 aa23.98■■□□□ 1.43
DDX49-213ENST00000602113 PROSER2Q86WR7 435 aaPredicted RBP23.98■■□□□ 1.43
DDX49-213ENST00000602113 ATP7BP35670 1465 aa23.97■■□□□ 1.43
DDX49-213ENST00000602113 ADGRL3Q9HAR2 1447 aa23.97■■□□□ 1.43
DDX49-213ENST00000602113 CABP1Q9NZU7 370 aa23.96■■□□□ 1.43
DDX49-213ENST00000602113 PRKRIP1Q9H875 184 aaPredicted RBP23.95■■□□□ 1.43
DDX49-213ENST00000602113 ANKRD36BQ8N2N9 1353 aa23.95■■□□□ 1.42
DDX49-213ENST00000602113 DMRT2Q9Y5R5 561 aa23.95■■□□□ 1.42
DDX49-213ENST00000602113 CD163L1Q9NR16 1453 aa23.94■■□□□ 1.42
DDX49-213ENST00000602113 CDC42BPGQ6DT37 1551 aa23.93■■□□□ 1.42
DDX49-213ENST00000602113 PPIP5K1Q6PFW1 1433 aa23.93■■□□□ 1.42
DDX49-213ENST00000602113 NUTM2FA1L443 756 aa23.93■■□□□ 1.42
DDX49-213ENST00000602113 KNSTRNQ9Y448 316 aa23.93■■□□□ 1.42
DDX49-213ENST00000602113 CCDC61Q9Y6R9 512 aa23.93■■□□□ 1.42
DDX49-213ENST00000602113 ZNF335Q9H4Z2 1342 aaPredicted RBP23.93■■□□□ 1.42
DDX49-213ENST00000602113 CNGB1Q14028 1251 aaPredicted RBP23.92■■□□□ 1.42
DDX49-213ENST00000602113 A0A1W2PP64 1363 aa23.92■■□□□ 1.42
DDX49-213ENST00000602113 USP32Q8NFA0 1604 aa23.92■■□□□ 1.42
DDX49-213ENST00000602113 TMEM94Q12767 1356 aa23.91■■□□□ 1.42
DDX49-213ENST00000602113 AMER1Q5JTC6 1135 aaPredicted RBP23.91■■□□□ 1.42
DDX49-213ENST00000602113 FMN2Q9NZ56 1722 aa23.91■■□□□ 1.42
DDX49-213ENST00000602113 C14orf37Q86TY3 774 aa23.9■■□□□ 1.42
DDX49-213ENST00000602113 NSD3Q9BZ95 1437 aa23.9■■□□□ 1.42
DDX49-213ENST00000602113 TOPAZ1Q8N9V7 1692 aa23.9■■□□□ 1.42
DDX49-213ENST00000602113 TERF2IPQ9NYB0 399 aa23.89■■□□□ 1.42
DDX49-213ENST00000602113 ANKARQ7Z5J8 1434 aa23.88■■□□□ 1.41
DDX49-213ENST00000602113 NCOA3Q9Y6Q9 1424 aa23.87■■□□□ 1.41
DDX49-213ENST00000602113 KTN1Q86UP2 1357 aaKnown RBP23.87■■□□□ 1.41
DDX49-213ENST00000602113 CC2D1BQ5T0F9 858 aaKnown RBP23.87■■□□□ 1.41
DDX49-213ENST00000602113 CPSF1Q10570 1443 aaKnown RBP23.86■■□□□ 1.41
DDX49-213ENST00000602113 HDGFL2Q7Z4V5 671 aaPredicted RBP23.86■■□□□ 1.41
DDX49-213ENST00000602113 NPC1L1Q9UHC9 1359 aa23.86■■□□□ 1.41
DDX49-213ENST00000602113 PLEKHG3A1L390 1219 aa23.86■■□□□ 1.41
DDX49-213ENST00000602113 PARD3Q8TEW0 1356 aa23.85■■□□□ 1.41
DDX49-213ENST00000602113 C19orf44Q9H6X5 657 aa23.85■■□□□ 1.41
DDX49-213ENST00000602113 LRRC7Q96NW7 1537 aa23.85■■□□□ 1.41
DDX49-213ENST00000602113 AEBP2Q6ZN18 517 aaPredicted RBP23.84■■□□□ 1.41
DDX49-213ENST00000602113 CCER2I3L3R5 266 aa23.83■■□□□ 1.41
DDX49-213ENST00000602113 RALBP1Q15311 655 aa23.83■■□□□ 1.41
DDX49-213ENST00000602113 RGPD8O14715 1765 aaPredicted RBP23.83■■□□□ 1.41
DDX49-213ENST00000602113 ITSN1Q15811 1721 aa23.81■■□□□ 1.4
DDX49-213ENST00000602113 XIRP1Q702N8 1843 aaKnown RBP23.81■■□□□ 1.4
DDX49-213ENST00000602113 ACEP12821 1306 aa23.81■■□□□ 1.4
DDX49-213ENST00000602113 CGNL1Q0VF96 1302 aa23.79■■□□□ 1.4
DDX49-213ENST00000602113 PMFBP1Q8TBY8 1022 aa23.79■■□□□ 1.4
DDX49-213ENST00000602113 AKAP12Q02952 1782 aa23.78■■□□□ 1.4
DDX49-213ENST00000602113 DCCP43146 1447 aa23.78■■□□□ 1.4
DDX49-213ENST00000602113 POLR3AO14802 1390 aaPredicted RBP23.77■■□□□ 1.4
DDX49-213ENST00000602113 CCDC184Q52MB2 194 aa23.77■■□□□ 1.4
DDX49-213ENST00000602113 ZNF692Q9BU19 519 aaPredicted RBP23.77■■□□□ 1.4
DDX49-213ENST00000602113 MON2Q7Z3U7 1717 aa23.77■■□□□ 1.39
DDX49-213ENST00000602113 EDC4Q6P2E9 1401 aaKnown RBP23.76■■□□□ 1.39
DDX49-213ENST00000602113 MYBBP1AQ9BQG0 1328 aaKnown RBP23.76■■□□□ 1.39
DDX49-213ENST00000602113 MSH6P52701 1360 aa23.75■■□□□ 1.39
DDX49-213ENST00000602113 ATF3P18847 181 aa23.75■■□□□ 1.39
DDX49-213ENST00000602113 FYB1O15117 783 aa23.74■■□□□ 1.39
DDX49-213ENST00000602113 PHF8Q9UPP1 1060 aa23.74■■□□□ 1.39
DDX49-213ENST00000602113 C1orf167Q5SNV9 1468 aa23.74■■□□□ 1.39
DDX49-213ENST00000602113 NSD2O96028 1365 aa23.74■■□□□ 1.39
DDX49-213ENST00000602113 USP6P35125 1406 aa23.74■■□□□ 1.39
DDX49-213ENST00000602113 MST1RQ04912 1400 aa23.74■■□□□ 1.39
DDX49-213ENST00000602113 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.73■■□□□ 1.39
DDX49-213ENST00000602113 NGDNQ8NEJ9 315 aaKnown RBP23.73■■□□□ 1.39
DDX49-213ENST00000602113 ESCO1Q5FWF5 840 aa23.73■■□□□ 1.39
DDX49-213ENST00000602113 CADPS2Q86UW7 1296 aa23.72■■□□□ 1.39
DDX49-213ENST00000602113 ORAI2Q96SN7 254 aa23.72■■□□□ 1.39
DDX49-213ENST00000602113 NRKQ7Z2Y5 1582 aa23.71■■□□□ 1.39
DDX49-213ENST00000602113 SSH2Q76I76 1423 aa23.71■■□□□ 1.39
DDX49-213ENST00000602113 LTBP4Q8N2S1 1624 aa23.7■■□□□ 1.39
DDX49-213ENST00000602113 GGNBP2Q9H3C7 697 aa23.7■■□□□ 1.39
DDX49-213ENST00000602113 PPP2R1AP30153 589 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms