RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 TRAK2O60296 914 aa14.62□□□□□ -0.07
SHANK2-218ENST00000601538 KINO60870 393 aaKnown RBP14.62□□□□□ -0.07
SHANK2-218ENST00000601538 SMARCA2P51531 1590 aa14.61□□□□□ -0.07
SHANK2-218ENST00000601538 CCDC43Q96MW1 224 aaKnown RBP14.61□□□□□ -0.07
SHANK2-218ENST00000601538 CCDC112Q8NEF3 446 aa14.61□□□□□ -0.07
SHANK2-218ENST00000601538 CLGNO14967 610 aa14.61□□□□□ -0.07
SHANK2-218ENST00000601538 ENOX2Q16206 610 aaKnown RBP14.61□□□□□ -0.07
SHANK2-218ENST00000601538 SLC4A10Q6U841 1118 aa14.61□□□□□ -0.07
SHANK2-218ENST00000601538 BACH2Q9BYV9 841 aa14.61□□□□□ -0.07
SHANK2-218ENST00000601538 ERICH3Q5RHP9 1530 aa14.61□□□□□ -0.07
SHANK2-218ENST00000601538 XBP1P17861 261 aa14.61□□□□□ -0.07
SHANK2-218ENST00000601538 ZNHIT6Q9NWK9 470 aaKnown RBP14.61□□□□□ -0.07
SHANK2-218ENST00000601538 ERICH2A1L162 156 aa14.6□□□□□ -0.07
SHANK2-218ENST00000601538 MCM3P25205 808 aa14.6□□□□□ -0.07
SHANK2-218ENST00000601538 KRI1Q8N9T8 703 aaKnown RBP14.6□□□□□ -0.07
SHANK2-218ENST00000601538 G3V3G9 751 aa14.6□□□□□ -0.07
SHANK2-218ENST00000601538 GBP2P32456 591 aaPredicted RBP14.6□□□□□ -0.07
SHANK2-218ENST00000601538 DCAF8Q5TAQ9 597 aa14.6□□□□□ -0.07
SHANK2-218ENST00000601538 SPATA24Q86W54 205 aa14.6□□□□□ -0.07
SHANK2-218ENST00000601538 NOL10Q9BSC4 688 aaKnown RBP14.6□□□□□ -0.07
SHANK2-218ENST00000601538 GOLGA6L10A0A0M3HER8 536 aa14.59□□□□□ -0.07
SHANK2-218ENST00000601538 NBPF1Q3BBV0 1214 aa14.59□□□□□ -0.07
SHANK2-218ENST00000601538 CGNQ9P2M7 1197 aaKnown RBP14.59□□□□□ -0.07
SHANK2-218ENST00000601538 LRRCC1Q9C099 1032 aa14.59□□□□□ -0.07
SHANK2-218ENST00000601538 ANO2Q9NQ90 1003 aa14.59□□□□□ -0.07
SHANK2-218ENST00000601538 FAM193AP78312 1265 aa14.59□□□□□ -0.07
SHANK2-218ENST00000601538 FRAT2O75474 233 aaPredicted RBP14.59□□□□□ -0.07
SHANK2-218ENST00000601538 RBM28Q9NW13 759 aaKnown RBP14.59□□□□□ -0.07
SHANK2-218ENST00000601538 PDILTQ8N807 584 aa14.59□□□□□ -0.07
SHANK2-218ENST00000601538 SCAPERQ9BY12 1400 aa14.59□□□□□ -0.07
SHANK2-218ENST00000601538 PRKRIP1Q9H875 184 aaPredicted RBP14.58□□□□□ -0.07
SHANK2-218ENST00000601538 FOXD4L6Q3SYB3 417 aaPredicted RBP14.58□□□□□ -0.08
SHANK2-218ENST00000601538 FOXD4L3Q6VB84 417 aaPredicted RBP14.58□□□□□ -0.08
SHANK2-218ENST00000601538 KCNH8Q96L42 1107 aa14.58□□□□□ -0.08
SHANK2-218ENST00000601538 PSMA5P28066 241 aa14.58□□□□□ -0.08
SHANK2-218ENST00000601538 SDF4Q9BRK5 362 aa14.58□□□□□ -0.08
SHANK2-218ENST00000601538 GBP3Q9H0R5 595 aa14.58□□□□□ -0.08
SHANK2-218ENST00000601538 POLR3GO15318 223 aaPredicted RBP14.57□□□□□ -0.08
SHANK2-218ENST00000601538 MAP9Q49MG5 647 aa14.57□□□□□ -0.08
SHANK2-218ENST00000601538 MAGEC2Q9UBF1 373 aaPredicted RBP14.57□□□□□ -0.08
SHANK2-218ENST00000601538 FBXO3Q9UK99 471 aa14.57□□□□□ -0.08
SHANK2-218ENST00000601538 C22orf23Q9BZE7 217 aa14.57□□□□□ -0.08
SHANK2-218ENST00000601538 CWC22Q9HCG8 908 aaKnown RBP14.57□□□□□ -0.08
SHANK2-218ENST00000601538 VPS37CA5D8V6 355 aaPredicted RBP14.57□□□□□ -0.08
SHANK2-218ENST00000601538 BBXQ8WY36 941 aaPredicted RBP14.56□□□□□ -0.08
SHANK2-218ENST00000601538 SHTN1A0MZ66 631 aa14.56□□□□□ -0.08
SHANK2-218ENST00000601538 ERC2O15083 957 aa14.56□□□□□ -0.08
SHANK2-218ENST00000601538 CCDC192P0DO97 292 aa14.56□□□□□ -0.08
SHANK2-218ENST00000601538 HOMEZQ8IX15 550 aa14.56□□□□□ -0.08
SHANK2-218ENST00000601538 DHX29Q7Z478 1369 aaKnown RBP14.56□□□□□ -0.08
SHANK2-218ENST00000601538 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.56□□□□□ -0.081e-6■■■■□ 20.6
SHANK2-218ENST00000601538 MICALCLQ6ZW33 695 aa14.55□□□□□ -0.08
SHANK2-218ENST00000601538 CCDC146Q8IYE0 955 aa14.55□□□□□ -0.08
SHANK2-218ENST00000601538 CLUAP1Q96AJ1 413 aa14.55□□□□□ -0.08
SHANK2-218ENST00000601538 DACH1Q9UI36 760 aa14.55□□□□□ -0.08
SHANK2-218ENST00000601538 WASHC2AQ641Q2 1341 aa14.55□□□□□ -0.08
SHANK2-218ENST00000601538 WASHC2CQ9Y4E1 1318 aa14.55□□□□□ -0.08
SHANK2-218ENST00000601538 SENP3Q9H4L4 574 aaPredicted RBP14.55□□□□□ -0.08
SHANK2-218ENST00000601538 FEZ1Q99689 392 aa14.55□□□□□ -0.08
SHANK2-218ENST00000601538 TXLNAP40222 546 aa14.55□□□□□ -0.08
SHANK2-218ENST00000601538 CCDC91Q7Z6B0 441 aa14.54□□□□□ -0.08
SHANK2-218ENST00000601538 SMC2O95347 1197 aa14.54□□□□□ -0.08
SHANK2-218ENST00000601538 UACAQ9BZF9 1416 aa14.54□□□□□ -0.08
SHANK2-218ENST00000601538 SYCP1Q15431 976 aa14.54□□□□□ -0.08
SHANK2-218ENST00000601538 LUZP1Q86V48 1076 aa14.54□□□□□ -0.08
SHANK2-218ENST00000601538 IVLP07476 585 aa14.54□□□□□ -0.08
SHANK2-218ENST00000601538 HSP90AB4PQ58FF6 505 aa14.54□□□□□ -0.08
SHANK2-218ENST00000601538 JMYQ8N9B5 988 aa14.54□□□□□ -0.08
SHANK2-218ENST00000601538 TRIM34Q9BYJ4 488 aa14.54□□□□□ -0.08
SHANK2-218ENST00000601538 MIA2Q96PC5 1412 aa14.54□□□□□ -0.08
SHANK2-218ENST00000601538 CBFA2T2O43439 604 aa14.54□□□□□ -0.08
SHANK2-218ENST00000601538 ZFYVE27Q5T4F4 411 aa14.54□□□□□ -0.08
SHANK2-218ENST00000601538 CAVIN2O95810 425 aa14.53□□□□□ -0.08
SHANK2-218ENST00000601538 CCDC181Q5TID7 509 aa14.53□□□□□ -0.08
SHANK2-218ENST00000601538 RBM33Q96EV2 1170 aaKnown RBP14.53□□□□□ -0.08
SHANK2-218ENST00000601538 DHX16O60231 1041 aaKnown RBP14.53□□□□□ -0.08
SHANK2-218ENST00000601538 TUBB4BP68371 445 aa14.53□□□□□ -0.08
SHANK2-218ENST00000601538 CCDC94Q9BW85 323 aaPredicted RBP14.53□□□□□ -0.08
SHANK2-218ENST00000601538 TUBB4AP04350 444 aa14.53□□□□□ -0.08
SHANK2-218ENST00000601538 CNKSR2Q8WXI2 1034 aa14.53□□□□□ -0.08
SHANK2-218ENST00000601538 ZNF396Q96N95 335 aaPredicted RBP14.53□□□□□ -0.08
SHANK2-218ENST00000601538 PPM1EQ8WY54 764 aa14.52□□□□□ -0.08
SHANK2-218ENST00000601538 NF2P35240 595 aa14.52□□□□□ -0.08
SHANK2-218ENST00000601538 ATAD2Q6PL18 1390 aa14.52□□□□□ -0.09
SHANK2-218ENST00000601538 SLC4A3P48751 1232 aa14.51□□□□□ -0.09
SHANK2-218ENST00000601538 STIM1Q13586 685 aa14.51□□□□□ -0.09
SHANK2-218ENST00000601538 TTLL5Q6EMB2 1281 aa14.51□□□□□ -0.09
SHANK2-218ENST00000601538 NFXL1Q6ZNB6 911 aa14.51□□□□□ -0.09
SHANK2-218ENST00000601538 CCDC144AA2RUR9 1427 aa14.51□□□□□ -0.09
SHANK2-218ENST00000601538 IFIT2P09913 472 aaKnown RBP14.51□□□□□ -0.09
SHANK2-218ENST00000601538 SUPT6HQ7KZ85 1726 aaKnown RBP14.51□□□□□ -0.09
SHANK2-218ENST00000601538 PPFIBP1Q86W92 1011 aa14.5□□□□□ -0.09
SHANK2-218ENST00000601538 ZNF330Q9Y3S2 320 aaPredicted RBP14.5□□□□□ -0.09
SHANK2-218ENST00000601538 RALYLQ86SE5 291 aaKnown RBP14.5□□□□□ -0.09
SHANK2-218ENST00000601538 CTDP1Q9Y5B0 961 aaPredicted RBP14.5□□□□□ -0.09
SHANK2-218ENST00000601538 PLEKHH1Q9ULM0 1364 aa14.5□□□□□ -0.09
SHANK2-218ENST00000601538 KIF3BO15066 747 aa14.5□□□□□ -0.09
SHANK2-218ENST00000601538 CENPHQ9H3R5 247 aa14.49□□□□□ -0.09
SHANK2-218ENST00000601538 SOX12O15370 315 aa14.49□□□□□ -0.09
SHANK2-218ENST00000601538 NEMFO60524 1076 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms