RNA–Protein interactions for RNA: ENST00000601415.5

ZNF550-208, Transcript of zinc finger protein 550, humanhuman

TSL 4 BASIC

Gene ZNF550, Length 515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-208ENST00000601415 CFAP70Q5T0N1 1121 aa23.67■■□□□ 1.38
ZNF550-208ENST00000601415 PIK3C2GO75747 1445 aa23.67■■□□□ 1.38
ZNF550-208ENST00000601415 LRP6O75581 1613 aa23.66■■□□□ 1.38
ZNF550-208ENST00000601415 DHX57Q6P158 1386 aaKnown RBP23.66■■□□□ 1.38
ZNF550-208ENST00000601415 KDM2AQ9Y2K7 1162 aa23.66■■□□□ 1.38
ZNF550-208ENST00000601415 NHSL1Q5SYE7 1610 aa23.64■■□□□ 1.38
ZNF550-208ENST00000601415 YTHDC2Q9H6S0 1430 aaKnown RBP23.64■■□□□ 1.37
ZNF550-208ENST00000601415 IFT172Q9UG01 1749 aa23.64■■□□□ 1.37
ZNF550-208ENST00000601415 TECPR2O15040 1411 aa23.62■■□□□ 1.37
ZNF550-208ENST00000601415 DCAF11Q8TEB1 546 aa23.62■■□□□ 1.37
ZNF550-208ENST00000601415 SIRT1Q96EB6 747 aa23.62■■□□□ 1.37
ZNF550-208ENST00000601415 C8orf37Q96NL8 207 aa23.62■■□□□ 1.37
ZNF550-208ENST00000601415 PNPLA6Q8IY17 1366 aa23.62■■□□□ 1.37
ZNF550-208ENST00000601415 SOS2Q07890 1332 aaPredicted RBP23.61■■□□□ 1.37
ZNF550-208ENST00000601415 NPHP3Q7Z494 1330 aa23.61■■□□□ 1.37
ZNF550-208ENST00000601415 POGKQ9P215 609 aa23.61■■□□□ 1.37
ZNF550-208ENST00000601415 FOXO3O43524 673 aa23.6■■□□□ 1.37
ZNF550-208ENST00000601415 ADAMTS2O95450 1211 aa23.6■■□□□ 1.37
ZNF550-208ENST00000601415 RXRBP28702 533 aa23.6■■□□□ 1.37
ZNF550-208ENST00000601415 PLEKHH1Q9ULM0 1364 aa23.6■■□□□ 1.37
ZNF550-208ENST00000601415 AFF2P51816 1311 aa23.59■■□□□ 1.37
ZNF550-208ENST00000601415 SAFB2Q14151 953 aaKnown RBP eCLIP23.59■■□□□ 1.37
ZNF550-208ENST00000601415 NGLY1Q96IV0 654 aa23.59■■□□□ 1.37
ZNF550-208ENST00000601415 MYOM2P54296 1465 aa23.58■■□□□ 1.37
ZNF550-208ENST00000601415 PRAM1Q96QH2 718 aa23.57■■□□□ 1.36
ZNF550-208ENST00000601415 CDC42BPGQ6DT37 1551 aa23.57■■□□□ 1.36
ZNF550-208ENST00000601415 XPCQ01831 940 aaPredicted RBP23.56■■□□□ 1.36
ZNF550-208ENST00000601415 STAC3Q96MF2 364 aa23.56■■□□□ 1.36
ZNF550-208ENST00000601415 NRXN1Q9ULB1 1477 aa23.55■■□□□ 1.36
ZNF550-208ENST00000601415 QTRT2Q9H974 415 aaKnown RBP23.54■■□□□ 1.36
ZNF550-208ENST00000601415 TRAK1Q9UPV9 953 aa23.54■■□□□ 1.36
ZNF550-208ENST00000601415 KNDC1Q76NI1 1749 aa23.52■■□□□ 1.36
ZNF550-208ENST00000601415 LAMC1P11047 1609 aa23.51■■□□□ 1.35
ZNF550-208ENST00000601415 KRT28Q7Z3Y7 464 aa23.49■■□□□ 1.35
ZNF550-208ENST00000601415 PHF8Q9UPP1 1060 aa23.49■■□□□ 1.35
ZNF550-208ENST00000601415 PSME1Q06323 249 aa23.48■■□□□ 1.35
ZNF550-208ENST00000601415 RBM6P78332 1123 aaKnown RBP23.47■■□□□ 1.35
ZNF550-208ENST00000601415 USP21Q9UK80 565 aa23.47■■□□□ 1.35
ZNF550-208ENST00000601415 HIRIP3Q9BW71 556 aaPredicted RBP23.45■■□□□ 1.34
ZNF550-208ENST00000601415 MINK1Q8N4C8 1332 aaPredicted RBP23.44■■□□□ 1.34
ZNF550-208ENST00000601415 HAP1P54257 671 aaPredicted RBP23.44■■□□□ 1.34
ZNF550-208ENST00000601415 PXDNQ92626 1479 aa23.43■■□□□ 1.34
ZNF550-208ENST00000601415 LMOD2Q6P5Q4 547 aa23.43■■□□□ 1.34
ZNF550-208ENST00000601415 FMN2Q9NZ56 1722 aa23.42■■□□□ 1.34
ZNF550-208ENST00000601415 TRPC5Q9UL62 973 aaPredicted RBP23.42■■□□□ 1.34
ZNF550-208ENST00000601415 DLC1Q96QB1 1528 aa23.42■■□□□ 1.34
ZNF550-208ENST00000601415 SPATA31A3Q5VYP0 1347 aa23.41■■□□□ 1.34
ZNF550-208ENST00000601415 PLEKHG5O94827 1062 aa23.41■■□□□ 1.34
ZNF550-208ENST00000601415 PMFBP1Q8TBY8 1022 aa23.41■■□□□ 1.34
ZNF550-208ENST00000601415 FNBP4Q8N3X1 1017 aaPredicted RBP23.4■■□□□ 1.34
ZNF550-208ENST00000601415 ADGRB1O14514 1584 aa23.38■■□□□ 1.33
ZNF550-208ENST00000601415 KIF1AQ12756 1690 aa23.38■■□□□ 1.33
ZNF550-208ENST00000601415 WASLO00401 505 aaPredicted RBP23.37■■□□□ 1.33
ZNF550-208ENST00000601415 EIF3AQ14152 1382 aaKnown RBP23.37■■□□□ 1.33
ZNF550-208ENST00000601415 CDK12Q9NYV4 1490 aaPredicted RBP23.36■■□□□ 1.33
ZNF550-208ENST00000601415 UPF1Q92900 1129 aaKnown RBP eCLIP23.36■■□□□ 1.33
ZNF550-208ENST00000601415 COL22A1Q8NFW1 1626 aaPredicted RBP23.36■■□□□ 1.33
ZNF550-208ENST00000601415 ANKARQ7Z5J8 1434 aa23.34■■□□□ 1.33
ZNF550-208ENST00000601415 RGPD8O14715 1765 aaPredicted RBP23.34■■□□□ 1.33
ZNF550-208ENST00000601415 NGDNQ8NEJ9 315 aaKnown RBP23.33■■□□□ 1.33
ZNF550-208ENST00000601415 GPRASP1Q5JY77 1395 aa23.32■■□□□ 1.32
ZNF550-208ENST00000601415 CABLES1Q8TDN4 633 aa23.32■■□□□ 1.32
ZNF550-208ENST00000601415 SBNO1A3KN83 1393 aa23.31■■□□□ 1.32
ZNF550-208ENST00000601415 TNS3Q68CZ2 1445 aa23.31■■□□□ 1.32
ZNF550-208ENST00000601415 ARHGEF10O15013 1369 aa23.29■■□□□ 1.32
ZNF550-208ENST00000601415 RGS12O14924 1447 aa23.28■■□□□ 1.32
ZNF550-208ENST00000601415 PAK3O75914 559 aaPredicted RBP23.28■■□□□ 1.32
ZNF550-208ENST00000601415 NEUROD1Q13562 356 aa23.28■■□□□ 1.32
ZNF550-208ENST00000601415 UNC5CLQ8IV45 518 aa23.28■■□□□ 1.32
ZNF550-208ENST00000601415 NBPF1Q3BBV0 1214 aa23.27■■□□□ 1.32
ZNF550-208ENST00000601415 NUDT16Q96DE0 195 aaKnown RBP23.27■■□□□ 1.32
ZNF550-208ENST00000601415 GJD4Q96KN9 370 aaPredicted RBP23.27■■□□□ 1.32
ZNF550-208ENST00000601415 CDK19Q9BWU1 502 aa23.27■■□□□ 1.32
ZNF550-208ENST00000601415 PRR36Q9H6K5 1346 aa23.27■■□□□ 1.32
ZNF550-208ENST00000601415 ADGRB2O60241 1585 aa23.27■■□□□ 1.32
ZNF550-208ENST00000601415 ATRNO75882 1429 aa23.26■■□□□ 1.31
ZNF550-208ENST00000601415 BCL9LQ86UU0 1499 aa23.24■■□□□ 1.31
ZNF550-208ENST00000601415 TULP4Q9NRJ4 1543 aa23.24■■□□□ 1.31
ZNF550-208ENST00000601415 L3MBTL2Q969R5 705 aa23.24■■□□□ 1.31
ZNF550-208ENST00000601415 SIN3AQ96ST3 1273 aa23.24■■□□□ 1.31
ZNF550-208ENST00000601415 CCDC9Q9Y3X0 531 aaKnown RBP23.24■■□□□ 1.31
ZNF550-208ENST00000601415 USP32Q8NFA0 1604 aa23.22■■□□□ 1.31
ZNF550-208ENST00000601415 MARF1Q9Y4F3 1742 aaKnown RBP23.22■■□□□ 1.31
ZNF550-208ENST00000601415 ATAD2Q6PL18 1390 aa23.21■■□□□ 1.31
ZNF550-208ENST00000601415 SRPK2P78362 688 aaKnown RBP23.19■■□□□ 1.3
ZNF550-208ENST00000601415 CCDC61Q9Y6R9 512 aa23.19■■□□□ 1.3
ZNF550-208ENST00000601415 ARHGEF28Q8N1W1 1705 aaKnown RBP23.19■■□□□ 1.3
ZNF550-208ENST00000601415 CENPJQ9HC77 1338 aaPredicted RBP23.18■■□□□ 1.3
ZNF550-208ENST00000601415 FAM83GA6ND36 823 aa23.18■■□□□ 1.3
ZNF550-208ENST00000601415 KIAA1210Q9ULL0 1709 aa23.18■■□□□ 1.3
ZNF550-208ENST00000601415 SLIT2O94813 1529 aa23.17■■□□□ 1.3
ZNF550-208ENST00000601415 VPS72Q15906 364 aa23.15■■□□□ 1.3
ZNF550-208ENST00000601415 NBPF8Q3BBV2 869 aa23.14■■□□□ 1.29
ZNF550-208ENST00000601415 ACEP12821 1306 aa23.13■■□□□ 1.29
ZNF550-208ENST00000601415 BTG4Q9NY30 223 aa23.13■■□□□ 1.29
ZNF550-208ENST00000601415 ATP7BP35670 1465 aa23.12■■□□□ 1.29
ZNF550-208ENST00000601415 RALGAPBQ86X10 1494 aa23.12■■□□□ 1.29
ZNF550-208ENST00000601415 A0A0G2JS52 829 aa23.12■■□□□ 1.29
ZNF550-208ENST00000601415 PLEKHG3A1L390 1219 aa23.12■■□□□ 1.29
ZNF550-208ENST00000601415 MYT1Q01538 1121 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms