RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 PSDA5PKW4 1024 aaPredicted RBP27.42■■□□□ 1.98
SSBP4-207ENST00000600244 SLIT2O94813 1529 aa27.41■■□□□ 1.98
SSBP4-207ENST00000600244 SPHKAPQ2M3C7 1700 aa27.41■■□□□ 1.98
SSBP4-207ENST00000600244 BRWD3Q6RI45 1802 aa27.41■■□□□ 1.98
SSBP4-207ENST00000600244 ROBO2Q9HCK4 1378 aa27.41■■□□□ 1.98
SSBP4-207ENST00000600244 ZNF326Q5BKZ1 582 aaKnown RBP27.41■■□□□ 1.98
SSBP4-207ENST00000600244 NPHP3Q7Z494 1330 aa27.41■■□□□ 1.98
SSBP4-207ENST00000600244 PXDNQ92626 1479 aa27.4■■□□□ 1.98
SSBP4-207ENST00000600244 APLP2Q06481 763 aa27.38■■□□□ 1.97
SSBP4-207ENST00000600244 FAM50AQ14320 339 aaKnown RBP27.38■■□□□ 1.97
SSBP4-207ENST00000600244 SEPT12Q8IYM1 358 aa27.38■■□□□ 1.97
SSBP4-207ENST00000600244 ONECUT3O60422 494 aaPredicted RBP27.36■■□□□ 1.97
SSBP4-207ENST00000600244 NUP155O75694 1391 aa27.35■■□□□ 1.97
SSBP4-207ENST00000600244 PRAG1Q86YV5 1406 aa27.35■■□□□ 1.97
SSBP4-207ENST00000600244 LOC105371045A0A1W2PR82 267 aa27.34■■□□□ 1.97
SSBP4-207ENST00000600244 ESCO1Q5FWF5 840 aa27.34■■□□□ 1.97
SSBP4-207ENST00000600244 NEXMIFQ5QGS0 1516 aa27.34■■□□□ 1.97
SSBP4-207ENST00000600244 FOXO3O43524 673 aa27.33■■□□□ 1.97
SSBP4-207ENST00000600244 XPCQ01831 940 aaPredicted RBP27.32■■□□□ 1.96
SSBP4-207ENST00000600244 BAG6P46379 1132 aa27.3■■□□□ 1.96
SSBP4-207ENST00000600244 KRT27Q7Z3Y8 459 aa27.3■■□□□ 1.96
SSBP4-207ENST00000600244 VPS72Q15906 364 aa27.29■■□□□ 1.96
SSBP4-207ENST00000600244 HFM1A2PYH4 1435 aa27.29■■□□□ 1.96
SSBP4-207ENST00000600244 ROCK1Q13464 1354 aa27.26■■□□□ 1.95
SSBP4-207ENST00000600244 LRPPRCP42704 1394 aaKnown RBP27.25■■□□□ 1.95
SSBP4-207ENST00000600244 SPATA31A3Q5VYP0 1347 aa27.24■■□□□ 1.95
SSBP4-207ENST00000600244 CDC42BPGQ6DT37 1551 aa27.22■■□□□ 1.95
SSBP4-207ENST00000600244 YY1P25490 414 aa27.21■■□□□ 1.95
SSBP4-207ENST00000600244 R3HDM1Q15032 1099 aaKnown RBP27.21■■□□□ 1.95
SSBP4-207ENST00000600244 USP32Q8NFA0 1604 aa27.2■■□□□ 1.95
SSBP4-207ENST00000600244 EN1Q05925 392 aaPredicted RBP27.2■■□□□ 1.94
SSBP4-207ENST00000600244 VGFO15240 615 aaPredicted RBP27.19■■□□□ 1.94
SSBP4-207ENST00000600244 CLTCL1P53675 1640 aa27.18■■□□□ 1.94
SSBP4-207ENST00000600244 CCDC9Q9Y3X0 531 aaKnown RBP27.15■■□□□ 1.94
SSBP4-207ENST00000600244 NUTM2FA1L443 756 aa27.13■■□□□ 1.93
SSBP4-207ENST00000600244 NWD2Q9ULI1 1742 aa27.13■■□□□ 1.93
SSBP4-207ENST00000600244 NAIPQ13075 1403 aa27.12■■□□□ 1.93
SSBP4-207ENST00000600244 KRT28Q7Z3Y7 464 aa27.11■■□□□ 1.93
SSBP4-207ENST00000600244 DISP2A7MBM2 1401 aa27.1■■□□□ 1.93
SSBP4-207ENST00000600244 CABLES1Q8TDN4 633 aa27.1■■□□□ 1.93
SSBP4-207ENST00000600244 CCDC144AA2RUR9 1427 aa27.09■■□□□ 1.93
SSBP4-207ENST00000600244 PLCH1Q4KWH8 1693 aa27.09■■□□□ 1.93
SSBP4-207ENST00000600244 KIF1BO60333 1816 aa27.08■■□□□ 1.93
SSBP4-207ENST00000600244 HAP1P54257 671 aaPredicted RBP27.07■■□□□ 1.92
SSBP4-207ENST00000600244 FAM98CQ17RN3 349 aaKnown RBP27.07■■□□□ 1.92
SSBP4-207ENST00000600244 RPGRIP1LQ68CZ1 1315 aa27.07■■□□□ 1.92
SSBP4-207ENST00000600244 FAM83GA6ND36 823 aa27.06■■□□□ 1.92
SSBP4-207ENST00000600244 RGPD1P0DJD0 1748 aa27.06■■□□□ 1.92
SSBP4-207ENST00000600244 A0A0G2JS52 829 aa27.05■■□□□ 1.92
SSBP4-207ENST00000600244 MYT1Q01538 1121 aa27.05■■□□□ 1.92
SSBP4-207ENST00000600244 EZH2Q15910 746 aaKnown RBP27.05■■□□□ 1.92
SSBP4-207ENST00000600244 WAPLQ7Z5K2 1190 aa27.05■■□□□ 1.92
SSBP4-207ENST00000600244 TNS3Q68CZ2 1445 aa27.04■■□□□ 1.92
SSBP4-207ENST00000600244 FAM182BQ5T319 152 aa27.03■■□□□ 1.92
SSBP4-207ENST00000600244 KIF1AQ12756 1690 aa27.02■■□□□ 1.92
SSBP4-207ENST00000600244 CAMKK2Q96RR4 588 aa27.02■■□□□ 1.92
SSBP4-207ENST00000600244 TECPR2O15040 1411 aa27■■□□□ 1.91
SSBP4-207ENST00000600244 TNS1Q9HBL0 1735 aaKnown RBP26.99■■□□□ 1.91
SSBP4-207ENST00000600244 PSME1Q06323 249 aa26.98■■□□□ 1.91
SSBP4-207ENST00000600244 FMN2Q9NZ56 1722 aa26.98■■□□□ 1.91
SSBP4-207ENST00000600244 SBNO1A3KN83 1393 aa26.97■■□□□ 1.91
SSBP4-207ENST00000600244 PLEKHH1Q9ULM0 1364 aa26.97■■□□□ 1.91
SSBP4-207ENST00000600244 NRAPQ86VF7 1730 aa26.96■■□□□ 1.91
SSBP4-207ENST00000600244 PLEKHG5O94827 1062 aa26.96■■□□□ 1.91
SSBP4-207ENST00000600244 ABCA3Q99758 1704 aa26.96■■□□□ 1.91
SSBP4-207ENST00000600244 STK26Q9P289 416 aa26.95■■□□□ 1.9
SSBP4-207ENST00000600244 PHF8Q9UPP1 1060 aa26.95■■□□□ 1.9
SSBP4-207ENST00000600244 ABCC11Q96J66 1382 aa26.95■■□□□ 1.9
SSBP4-207ENST00000600244 BTG4Q9NY30 223 aa26.94■■□□□ 1.9
SSBP4-207ENST00000600244 PPLO60437 1756 aa26.94■■□□□ 1.9
SSBP4-207ENST00000600244 ARHGEF10O15013 1369 aa26.93■■□□□ 1.9
SSBP4-207ENST00000600244 ITGAEP38570 1179 aa26.92■■□□□ 1.9
SSBP4-207ENST00000600244 SPATA31A5Q5VU36 1347 aa26.91■■□□□ 1.9
SSBP4-207ENST00000600244 SPATA31A7Q8IWB4 1347 aa26.91■■□□□ 1.9
SSBP4-207ENST00000600244 PARD3Q8TEW0 1356 aa26.91■■□□□ 1.9
SSBP4-207ENST00000600244 LMOD2Q6P5Q4 547 aa26.9■■□□□ 1.9
SSBP4-207ENST00000600244 THSD7AQ9UPZ6 1657 aa26.89■■□□□ 1.9
SSBP4-207ENST00000600244 TRIM37O94972 964 aa26.89■■□□□ 1.9
SSBP4-207ENST00000600244 ADGRF5Q8IZF2 1346 aa26.89■■□□□ 1.89
SSBP4-207ENST00000600244 NRXN1Q9ULB1 1477 aa26.87■■□□□ 1.89
SSBP4-207ENST00000600244 ADGRB2O60241 1585 aa26.86■■□□□ 1.89
SSBP4-207ENST00000600244 RGPD8O14715 1765 aaPredicted RBP26.86■■□□□ 1.89
SSBP4-207ENST00000600244 DCAF8L1A6NGE4 600 aa26.85■■□□□ 1.89
SSBP4-207ENST00000600244 APBA3O96018 575 aa26.85■■□□□ 1.89
SSBP4-207ENST00000600244 TMEM132EQ6IEE7 984 aa26.85■■□□□ 1.89
SSBP4-207ENST00000600244 FAM196AQ6ZSG2 479 aa26.85■■□□□ 1.89
SSBP4-207ENST00000600244 NINLQ9Y2I6 1382 aa26.84■■□□□ 1.89
SSBP4-207ENST00000600244 KNDC1Q76NI1 1749 aa26.83■■□□□ 1.89
SSBP4-207ENST00000600244 SIRT1Q96EB6 747 aa26.83■■□□□ 1.89
SSBP4-207ENST00000600244 SPON1Q9HCB6 807 aa26.83■■□□□ 1.89
SSBP4-207ENST00000600244 COL14A1Q05707 1796 aaKnown RBP26.83■■□□□ 1.89
SSBP4-207ENST00000600244 IFFO2Q5TF58 517 aa26.82■■□□□ 1.88
SSBP4-207ENST00000600244 KCNQ2O43526 872 aa26.81■■□□□ 1.88
SSBP4-207ENST00000600244 PPP1R1BQ9UD71 204 aaPredicted RBP26.81■■□□□ 1.88
SSBP4-207ENST00000600244 RREB1Q92766 1687 aa26.8■■□□□ 1.88
SSBP4-207ENST00000600244 NBPF8Q3BBV2 869 aa26.8■■□□□ 1.88
SSBP4-207ENST00000600244 NBPF14Q5TI25 921 aa26.8■■□□□ 1.88
SSBP4-207ENST00000600244 RRBP1Q9P2E9 1410 aaKnown RBP26.79■■□□□ 1.88
SSBP4-207ENST00000600244 ZNF784Q8NCA9 323 aaPredicted RBP26.78■■□□□ 1.88
SSBP4-207ENST00000600244 NUP188Q5SRE5 1749 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms