RNA–Protein interactions for RNA: ENST00000599966.5

PPFIA4-210, Transcript of PTPRF interacting protein alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPFIA4, Length 3,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-210ENST00000599966 ZNF521Q96K83 1311 aa16.23■□□□□ 0.19
PPFIA4-210ENST00000599966 MFAP1P55081 439 aaKnown RBP16.22■□□□□ 0.19
PPFIA4-210ENST00000599966 ZMYM4Q5VZL5 1548 aa16.22■□□□□ 0.19
PPFIA4-210ENST00000599966 E9PSI1 815 aa16.22■□□□□ 0.19
PPFIA4-210ENST00000599966 NPM1P06748 294 aaKnown RBP eCLIP16.22■□□□□ 0.19
PPFIA4-210ENST00000599966 FBLN1P23142 703 aa16.22■□□□□ 0.19
PPFIA4-210ENST00000599966 MAST1Q9Y2H9 1570 aa16.22■□□□□ 0.19
PPFIA4-210ENST00000599966 EIF3AQ14152 1382 aaKnown RBP16.22■□□□□ 0.19
PPFIA4-210ENST00000599966 TSR2Q969E8 191 aaKnown RBP16.21■□□□□ 0.19
PPFIA4-210ENST00000599966 GGNBP2Q9H3C7 697 aa16.21■□□□□ 0.19
PPFIA4-210ENST00000599966 MYO5CQ9NQX4 1742 aa16.21■□□□□ 0.18
PPFIA4-210ENST00000599966 NOS1P29475 1434 aa16.2■□□□□ 0.18
PPFIA4-210ENST00000599966 GAS2L3Q86XJ1 694 aa16.2■□□□□ 0.18
PPFIA4-210ENST00000599966 UNC13BO14795 1591 aa16.2■□□□□ 0.18
PPFIA4-210ENST00000599966 FANCAO15360 1455 aa16.2■□□□□ 0.18
PPFIA4-210ENST00000599966 RLBP1P12271 317 aa16.2■□□□□ 0.18
PPFIA4-210ENST00000599966 SRPK2P78362 688 aaKnown RBP16.2■□□□□ 0.18
PPFIA4-210ENST00000599966 NSD3Q9BZ95 1437 aa16.19■□□□□ 0.18
PPFIA4-210ENST00000599966 ZBTB7CA1YPR0 619 aa16.19■□□□□ 0.18
PPFIA4-210ENST00000599966 IQGAP3Q86VI3 1631 aa16.19■□□□□ 0.18
PPFIA4-210ENST00000599966 KIAA1211Q6ZU35 1233 aa16.19■□□□□ 0.18
PPFIA4-210ENST00000599966 ASXL1Q8IXJ9 1541 aa16.19■□□□□ 0.18
PPFIA4-210ENST00000599966 MRE11P49959 708 aa16.18■□□□□ 0.18
PPFIA4-210ENST00000599966 TBC1D32Q96NH3 1257 aa16.17■□□□□ 0.18
PPFIA4-210ENST00000599966 MINK1Q8N4C8 1332 aaPredicted RBP16.17■□□□□ 0.18
PPFIA4-210ENST00000599966 PDZRN3Q9UPQ7 1066 aa16.17■□□□□ 0.18
PPFIA4-210ENST00000599966 ADGRL1O94910 1474 aa16.17■□□□□ 0.18
PPFIA4-210ENST00000599966 FAM13BQ9NYF5 915 aa16.16■□□□□ 0.18
PPFIA4-210ENST00000599966 PCDHB15Q9Y5E8 787 aa16.16■□□□□ 0.18
PPFIA4-210ENST00000599966 CLTCL1P53675 1640 aa16.14■□□□□ 0.18
PPFIA4-210ENST00000599966 ZCCHC11Q5TAX3 1644 aaKnown RBP16.14■□□□□ 0.18
PPFIA4-210ENST00000599966 PLPPR3Q6T4P5 718 aa16.14■□□□□ 0.17
PPFIA4-210ENST00000599966 ABCC1P33527 1531 aa16.14■□□□□ 0.17
PPFIA4-210ENST00000599966 EIF2AK4Q9P2K8 1649 aaKnown RBP16.14■□□□□ 0.17
PPFIA4-210ENST00000599966 RUNDC1Q96C34 613 aa16.13■□□□□ 0.17
PPFIA4-210ENST00000599966 NKTRP30414 1462 aaKnown RBP16.13■□□□□ 0.17
PPFIA4-210ENST00000599966 ERVK-7P63135 1459 aa16.13■□□□□ 0.17
PPFIA4-210ENST00000599966 RARSP54136 660 aaKnown RBP16.13■□□□□ 0.17
PPFIA4-210ENST00000599966 TRMT2AQ8IZ69 625 aaKnown RBP16.13■□□□□ 0.17
PPFIA4-210ENST00000599966 CHMP5Q9NZZ3 219 aa16.13■□□□□ 0.17
PPFIA4-210ENST00000599966 MAPK8IP3Q9UPT6 1336 aa16.13■□□□□ 0.17
PPFIA4-210ENST00000599966 CFAP53Q96M91 514 aa16.12■□□□□ 0.17
PPFIA4-210ENST00000599966 MADDQ8WXG6 1647 aa16.12■□□□□ 0.17
PPFIA4-210ENST00000599966 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.12■□□□□ 0.17
PPFIA4-210ENST00000599966 FTSJ3Q8IY81 847 aaKnown RBP16.12■□□□□ 0.17
PPFIA4-210ENST00000599966 PLXNC1O60486 1568 aa16.11■□□□□ 0.17
PPFIA4-210ENST00000599966 PRDM10Q9NQV6 1147 aa16.11■□□□□ 0.17
PPFIA4-210ENST00000599966 C22orf23Q9BZE7 217 aa16.11■□□□□ 0.17
PPFIA4-210ENST00000599966 ELL2O00472 640 aaPredicted RBP16.1■□□□□ 0.17
PPFIA4-210ENST00000599966 MLECQ14165 292 aa16.1■□□□□ 0.17
PPFIA4-210ENST00000599966 NLRP1Q9C000 1473 aa16.1■□□□□ 0.17
PPFIA4-210ENST00000599966 STAG3Q9UJ98 1225 aa16.1■□□□□ 0.17
PPFIA4-210ENST00000599966 PIK3C2GO75747 1445 aa16.1■□□□□ 0.17
PPFIA4-210ENST00000599966 PDCL3Q9H2J4 239 aa16.09■□□□□ 0.17
PPFIA4-210ENST00000599966 PTPRTO14522 1441 aa16.09■□□□□ 0.17
PPFIA4-210ENST00000599966 SMC4Q9NTJ3 1288 aa16.09■□□□□ 0.17
PPFIA4-210ENST00000599966 R3HCC1Q9Y3T6 440 aaKnown RBP16.09■□□□□ 0.17
PPFIA4-210ENST00000599966 EXOSC9Q06265 439 aaKnown RBP16.08■□□□□ 0.17
PPFIA4-210ENST00000599966 CGNL1Q0VF96 1302 aa16.08■□□□□ 0.17
PPFIA4-210ENST00000599966 C14orf93Q9H972 538 aaKnown RBP16.08■□□□□ 0.16
PPFIA4-210ENST00000599966 ZFYVE16Q7Z3T8 1539 aa16.08■□□□□ 0.16
PPFIA4-210ENST00000599966 ITPRIPQ8IWB1 547 aa16.08■□□□□ 0.16
PPFIA4-210ENST00000599966 TRPM2O94759 1503 aa16.07■□□□□ 0.16
PPFIA4-210ENST00000599966 ASXL2Q76L83 1435 aa16.07■□□□□ 0.16
PPFIA4-210ENST00000599966 IDI1Q13907 227 aa16.07■□□□□ 0.16
PPFIA4-210ENST00000599966 ATP7AQ04656 1500 aa16.07■□□□□ 0.16
PPFIA4-210ENST00000599966 TNPO1Q92973 898 aaKnown RBP16.06■□□□□ 0.16
PPFIA4-210ENST00000599966 FBXO31Q5XUX0 539 aaPredicted RBP16.06■□□□□ 0.16
PPFIA4-210ENST00000599966 HSCBQ8IWL3 235 aa16.06■□□□□ 0.16
PPFIA4-210ENST00000599966 THUMPD2Q9BTF0 503 aaKnown RBP16.06■□□□□ 0.16
PPFIA4-210ENST00000599966 ZHX1Q9UKY1 873 aaPredicted RBP16.06■□□□□ 0.16
PPFIA4-210ENST00000599966 STAC3Q96MF2 364 aa16.05■□□□□ 0.16
PPFIA4-210ENST00000599966 UHRF1BP1LA0JNW5 1464 aa16.05■□□□□ 0.16
PPFIA4-210ENST00000599966 PRAM1Q96QH2 718 aa16.05■□□□□ 0.16
PPFIA4-210ENST00000599966 TPM2P07951 284 aa16.04■□□□□ 0.16
PPFIA4-210ENST00000599966 NCLP19338 710 aaKnown RBP16.04■□□□□ 0.16
PPFIA4-210ENST00000599966 RIPK4P57078 832 aa16.04■□□□□ 0.16
PPFIA4-210ENST00000599966 PDE3AQ14432 1141 aa16.04■□□□□ 0.16
PPFIA4-210ENST00000599966 EVC2Q86UK5 1308 aa16.04■□□□□ 0.16
PPFIA4-210ENST00000599966 RTEL1-TNFRSF6BF6WH68 1400 aa16.04■□□□□ 0.16
PPFIA4-210ENST00000599966 HMOX1P09601 288 aa16.04■□□□□ 0.16
PPFIA4-210ENST00000599966 PRDM4Q9UKN5 801 aa16.03■□□□□ 0.16
PPFIA4-210ENST00000599966 DDX11L8A8MPP1 907 aa16.02■□□□□ 0.16
PPFIA4-210ENST00000599966 XPCQ01831 940 aaPredicted RBP16.02■□□□□ 0.16
PPFIA4-210ENST00000599966 INSRP06213 1382 aa16.02■□□□□ 0.15
PPFIA4-210ENST00000599966 NUTM2FA1L443 756 aa16.01■□□□□ 0.15
PPFIA4-210ENST00000599966 HSP90AB1P08238 724 aaKnown RBP16.01■□□□□ 0.15
PPFIA4-210ENST00000599966 MSNP26038 577 aaKnown RBP16.01■□□□□ 0.15
PPFIA4-210ENST00000599966 SYNMO15061 1565 aa16.01■□□□□ 0.15
PPFIA4-210ENST00000599966 SOX12O15370 315 aa16.01■□□□□ 0.15
PPFIA4-210ENST00000599966 VGFO15240 615 aaPredicted RBP16.01■□□□□ 0.15
PPFIA4-210ENST00000599966 WAPLQ7Z5K2 1190 aa16.01■□□□□ 0.15
PPFIA4-210ENST00000599966 SSH1Q8WYL5 1049 aa16.01■□□□□ 0.15
PPFIA4-210ENST00000599966 CABP1Q9NZU7 370 aa16.01■□□□□ 0.15
PPFIA4-210ENST00000599966 SPHKAPQ2M3C7 1700 aa16■□□□□ 0.15
PPFIA4-210ENST00000599966 NPATQ14207 1427 aa16■□□□□ 0.15
PPFIA4-210ENST00000599966 RNF17Q9BXT8 1623 aaKnown RBP16■□□□□ 0.15
PPFIA4-210ENST00000599966 NASPP49321 788 aaPredicted RBP16■□□□□ 0.15
PPFIA4-210ENST00000599966 C1orf115Q9H7X2 142 aa16■□□□□ 0.15
PPFIA4-210ENST00000599966 IQGAP1P46940 1657 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms