RNA–Protein interactions for RNA: ENST00000599040.5

FARP1-226, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-226ENST00000599040 LAMC1P11047 1609 aa13.53□□□□□ -0.24
FARP1-226ENST00000599040 KNDC1Q76NI1 1749 aa13.53□□□□□ -0.24
FARP1-226ENST00000599040 NUTM2BA6NNL0 878 aaPredicted RBP13.53□□□□□ -0.24
FARP1-226ENST00000599040 NUTM2EB1AL46 878 aaPredicted RBP13.53□□□□□ -0.24
FARP1-226ENST00000599040 NUTM2AQ8IVF1 878 aaPredicted RBP13.53□□□□□ -0.24
FARP1-226ENST00000599040 STK26Q9P289 416 aa13.52□□□□□ -0.25
FARP1-226ENST00000599040 ABCC11Q96J66 1382 aa13.52□□□□□ -0.25
FARP1-226ENST00000599040 MYOM2P54296 1465 aa13.52□□□□□ -0.25
FARP1-226ENST00000599040 PNPLA6Q8IY17 1366 aa13.51□□□□□ -0.25
FARP1-226ENST00000599040 YTHDC2Q9H6S0 1430 aaKnown RBP13.5□□□□□ -0.25
FARP1-226ENST00000599040 NPHP3Q7Z494 1330 aa13.5□□□□□ -0.25
FARP1-226ENST00000599040 SOS2Q07890 1332 aaPredicted RBP13.49□□□□□ -0.25
FARP1-226ENST00000599040 ESCO1Q5FWF5 840 aa13.49□□□□□ -0.25
FARP1-226ENST00000599040 DDX17Q92841 729 aaKnown RBP13.49□□□□□ -0.25
FARP1-226ENST00000599040 SIRT1Q96EB6 747 aa13.49□□□□□ -0.25
FARP1-226ENST00000599040 ORAI2Q96SN7 254 aa13.49□□□□□ -0.25
FARP1-226ENST00000599040 NRXN1Q9ULB1 1477 aa13.48□□□□□ -0.25
FARP1-226ENST00000599040 AFF2P51816 1311 aa13.48□□□□□ -0.25
FARP1-226ENST00000599040 TMEM132EQ6IEE7 984 aa13.48□□□□□ -0.25
FARP1-226ENST00000599040 C14orf93Q9H972 538 aaKnown RBP13.48□□□□□ -0.25
FARP1-226ENST00000599040 RXRBP28702 533 aa13.47□□□□□ -0.25
FARP1-226ENST00000599040 WAPLQ7Z5K2 1190 aa13.47□□□□□ -0.25
FARP1-226ENST00000599040 STAC3Q96MF2 364 aa13.47□□□□□ -0.25
FARP1-226ENST00000599040 C8orf37Q96NL8 207 aa13.47□□□□□ -0.25
FARP1-226ENST00000599040 CDK12Q9NYV4 1490 aaPredicted RBP13.46□□□□□ -0.25
FARP1-226ENST00000599040 KIF1AQ12756 1690 aa13.45□□□□□ -0.26
FARP1-226ENST00000599040 FMN2Q9NZ56 1722 aa13.44□□□□□ -0.26
FARP1-226ENST00000599040 COL22A1Q8NFW1 1626 aaPredicted RBP13.44□□□□□ -0.26
FARP1-226ENST00000599040 ADAMTS2O95450 1211 aa13.44□□□□□ -0.26
FARP1-226ENST00000599040 CFAP70Q5T0N1 1121 aa13.44□□□□□ -0.26
FARP1-226ENST00000599040 NGLY1Q96IV0 654 aa13.44□□□□□ -0.26
FARP1-226ENST00000599040 PLEKHH1Q9ULM0 1364 aa13.44□□□□□ -0.26
FARP1-226ENST00000599040 DLC1Q96QB1 1528 aa13.43□□□□□ -0.26
FARP1-226ENST00000599040 PXDNQ92626 1479 aa13.42□□□□□ -0.26
FARP1-226ENST00000599040 FOXO3O43524 673 aa13.42□□□□□ -0.26
FARP1-226ENST00000599040 RBM6P78332 1123 aaKnown RBP13.42□□□□□ -0.26
FARP1-226ENST00000599040 POGKQ9P215 609 aa13.42□□□□□ -0.26
FARP1-226ENST00000599040 NUTM2FA1L443 756 aa13.41□□□□□ -0.26
FARP1-226ENST00000599040 PRAM1Q96QH2 718 aa13.41□□□□□ -0.26
FARP1-226ENST00000599040 QTRT2Q9H974 415 aaKnown RBP13.41□□□□□ -0.26
FARP1-226ENST00000599040 TIMELESSQ9UNS1 1208 aa13.41□□□□□ -0.26
FARP1-226ENST00000599040 DCAF11Q8TEB1 546 aa13.4□□□□□ -0.26
FARP1-226ENST00000599040 EIF3AQ14152 1382 aaKnown RBP13.4□□□□□ -0.26
FARP1-226ENST00000599040 PSME1Q06323 249 aa13.39□□□□□ -0.27
FARP1-226ENST00000599040 USP21Q9UK80 565 aa13.39□□□□□ -0.27
FARP1-226ENST00000599040 TRPC5Q9UL62 973 aaPredicted RBP13.39□□□□□ -0.27
FARP1-226ENST00000599040 ADGRB2O60241 1585 aa13.38□□□□□ -0.27
FARP1-226ENST00000599040 XPCQ01831 940 aaPredicted RBP13.38□□□□□ -0.27
FARP1-226ENST00000599040 SAFB2Q14151 953 aaKnown RBP eCLIP13.38□□□□□ -0.27
FARP1-226ENST00000599040 PHF8Q9UPP1 1060 aa13.38□□□□□ -0.27
FARP1-226ENST00000599040 KDM2AQ9Y2K7 1162 aa13.38□□□□□ -0.27
FARP1-226ENST00000599040 ANKARQ7Z5J8 1434 aa13.38□□□□□ -0.27
FARP1-226ENST00000599040 ADGRB1O14514 1584 aa13.37□□□□□ -0.27
FARP1-226ENST00000599040 MARF1Q9Y4F3 1742 aaKnown RBP13.37□□□□□ -0.27
FARP1-226ENST00000599040 FNBP4Q8N3X1 1017 aaPredicted RBP13.37□□□□□ -0.27
FARP1-226ENST00000599040 SPATA31A3Q5VYP0 1347 aa13.37□□□□□ -0.27
FARP1-226ENST00000599040 KRT28Q7Z3Y7 464 aa13.36□□□□□ -0.27
FARP1-226ENST00000599040 TRAK1Q9UPV9 953 aa13.36□□□□□ -0.27
FARP1-226ENST00000599040 RGPD8O14715 1765 aaPredicted RBP13.35□□□□□ -0.27
FARP1-226ENST00000599040 HAP1P54257 671 aaPredicted RBP13.35□□□□□ -0.27
FARP1-226ENST00000599040 NEUROD1Q13562 356 aa13.35□□□□□ -0.27
FARP1-226ENST00000599040 UPF1Q92900 1129 aaKnown RBP eCLIP13.35□□□□□ -0.27
FARP1-226ENST00000599040 RGS12O14924 1447 aa13.35□□□□□ -0.27
FARP1-226ENST00000599040 TNS3Q68CZ2 1445 aa13.35□□□□□ -0.27
FARP1-226ENST00000599040 SBNO1A3KN83 1393 aa13.34□□□□□ -0.27
FARP1-226ENST00000599040 ARHGEF10O15013 1369 aa13.34□□□□□ -0.27
FARP1-226ENST00000599040 TONSLQ96HA7 1378 aa13.34□□□□□ -0.27
FARP1-226ENST00000599040 ATRNO75882 1429 aa13.33□□□□□ -0.28
FARP1-226ENST00000599040 TULP4Q9NRJ4 1543 aa13.32□□□□□ -0.28
FARP1-226ENST00000599040 MINK1Q8N4C8 1332 aaPredicted RBP13.32□□□□□ -0.28
FARP1-226ENST00000599040 GPRASP1Q5JY77 1395 aa13.32□□□□□ -0.28
FARP1-226ENST00000599040 ATAD2Q6PL18 1390 aa13.32□□□□□ -0.28
FARP1-226ENST00000599040 USP32Q8NFA0 1604 aa13.31□□□□□ -0.28
FARP1-226ENST00000599040 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.31□□□□□ -0.28
FARP1-226ENST00000599040 KIAA1210Q9ULL0 1709 aa13.31□□□□□ -0.28
FARP1-226ENST00000599040 WASLO00401 505 aaPredicted RBP13.31□□□□□ -0.28
FARP1-226ENST00000599040 LMOD2Q6P5Q4 547 aa13.31□□□□□ -0.28
FARP1-226ENST00000599040 HIRIP3Q9BW71 556 aaPredicted RBP13.31□□□□□ -0.28
FARP1-226ENST00000599040 BCL9LQ86UU0 1499 aa13.3□□□□□ -0.28
FARP1-226ENST00000599040 ITSN1Q15811 1721 aa13.3□□□□□ -0.28
FARP1-226ENST00000599040 ARHGEF28Q8N1W1 1705 aaKnown RBP13.3□□□□□ -0.28
FARP1-226ENST00000599040 UNC5CLQ8IV45 518 aa13.29□□□□□ -0.28
FARP1-226ENST00000599040 PMFBP1Q8TBY8 1022 aa13.29□□□□□ -0.28
FARP1-226ENST00000599040 SIN3AQ96ST3 1273 aa13.29□□□□□ -0.28
FARP1-226ENST00000599040 NGDNQ8NEJ9 315 aaKnown RBP13.28□□□□□ -0.28
FARP1-226ENST00000599040 GJD4Q96KN9 370 aaPredicted RBP13.28□□□□□ -0.28
FARP1-226ENST00000599040 SLIT2O94813 1529 aa13.28□□□□□ -0.28
FARP1-226ENST00000599040 NWD2Q9ULI1 1742 aa13.27□□□□□ -0.29
FARP1-226ENST00000599040 EP400Q96L91 3159 aa13.26□□□□□ -0.29
FARP1-226ENST00000599040 ABCA3Q99758 1704 aa13.26□□□□□ -0.29
FARP1-226ENST00000599040 TRPM3Q9HCF6 1732 aaPredicted RBP13.25□□□□□ -0.29
FARP1-226ENST00000599040 PRR36Q9H6K5 1346 aa13.24□□□□□ -0.29
FARP1-226ENST00000599040 CABLES1Q8TDN4 633 aa13.24□□□□□ -0.29
FARP1-226ENST00000599040 NUDT16Q96DE0 195 aaKnown RBP13.24□□□□□ -0.29
FARP1-226ENST00000599040 PLCH1Q4KWH8 1693 aa13.24□□□□□ -0.29
FARP1-226ENST00000599040 ALS2Q96Q42 1657 aa13.24□□□□□ -0.29
FARP1-226ENST00000599040 ATP7BP35670 1465 aa13.23□□□□□ -0.29
FARP1-226ENST00000599040 RALGAPBQ86X10 1494 aa13.23□□□□□ -0.29
FARP1-226ENST00000599040 PAK3O75914 559 aaPredicted RBP13.23□□□□□ -0.29
FARP1-226ENST00000599040 PLEKHG5O94827 1062 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms