RNA–Protein interactions for RNA: ENST00000598329.2

SYMPK-210, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 1,000 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-210ENST00000598329 PCGF6Q9BYE7 350 aa18.1■□□□□ 0.49
SYMPK-210ENST00000598329 AHDC1Q5TGY3 1603 aaPredicted RBP18.09■□□□□ 0.49
SYMPK-210ENST00000598329 CLSPNQ9HAW4 1339 aa18.09■□□□□ 0.49
SYMPK-210ENST00000598329 PRAM1Q96QH2 718 aa18.09■□□□□ 0.49
SYMPK-210ENST00000598329 NBPF1Q3BBV0 1214 aa18.08■□□□□ 0.48
SYMPK-210ENST00000598329 TRAK1Q9UPV9 953 aa18.07■□□□□ 0.48
SYMPK-210ENST00000598329 ORAI2Q96SN7 254 aa18.04■□□□□ 0.48
SYMPK-210ENST00000598329 POGKQ9P215 609 aa18.04■□□□□ 0.48
SYMPK-210ENST00000598329 COL16A1Q07092 1604 aaPredicted RBP18.04■□□□□ 0.48
SYMPK-210ENST00000598329 ADGRB2O60241 1585 aa18.04■□□□□ 0.48
SYMPK-210ENST00000598329 GPRASP1Q5JY77 1395 aa18.03■□□□□ 0.48
SYMPK-210ENST00000598329 NBPF8Q3BBV2 869 aa18.02■□□□□ 0.48
SYMPK-210ENST00000598329 TIMELESSQ9UNS1 1208 aa18.02■□□□□ 0.48
SYMPK-210ENST00000598329 SOS2Q07890 1332 aaPredicted RBP18.01■□□□□ 0.47
SYMPK-210ENST00000598329 TONSLQ96HA7 1378 aa18.01■□□□□ 0.47
SYMPK-210ENST00000598329 JCADQ9P266 1359 aa18.01■□□□□ 0.47
SYMPK-210ENST00000598329 NHSL1Q5SYE7 1610 aa18.01■□□□□ 0.47
SYMPK-210ENST00000598329 ANKARQ7Z5J8 1434 aa18■□□□□ 0.47
SYMPK-210ENST00000598329 PHLPP1O60346 1717 aa18■□□□□ 0.47
SYMPK-210ENST00000598329 FMN2Q9NZ56 1722 aa18■□□□□ 0.47
SYMPK-210ENST00000598329 TRPM1Q7Z4N2 1603 aa17.99■□□□□ 0.47
SYMPK-210ENST00000598329 ARHGEF28Q8N1W1 1705 aaKnown RBP17.99■□□□□ 0.47
SYMPK-210ENST00000598329 WASLO00401 505 aaPredicted RBP17.98■□□□□ 0.47
SYMPK-210ENST00000598329 SAFB2Q14151 953 aaKnown RBP eCLIP17.98■□□□□ 0.47
SYMPK-210ENST00000598329 LRRC59Q96AG4 307 aaKnown RBP17.98■□□□□ 0.47
SYMPK-210ENST00000598329 ESCO1Q5FWF5 840 aa17.97■□□□□ 0.47
SYMPK-210ENST00000598329 EIF3AQ14152 1382 aaKnown RBP17.96■□□□□ 0.47
SYMPK-210ENST00000598329 SPATA31A6Q5VVP1 1343 aa17.96■□□□□ 0.46
SYMPK-210ENST00000598329 NPHP3Q7Z494 1330 aa17.96■□□□□ 0.46
SYMPK-210ENST00000598329 ROCK2O75116 1388 aaKnown RBP17.95■□□□□ 0.46
SYMPK-210ENST00000598329 DDX17Q92841 729 aaKnown RBP17.95■□□□□ 0.46
SYMPK-210ENST00000598329 MED1Q15648 1581 aaPredicted RBP17.95■□□□□ 0.46
SYMPK-210ENST00000598329 MINK1Q8N4C8 1332 aaPredicted RBP17.95■□□□□ 0.46
SYMPK-210ENST00000598329 CENPJQ9HC77 1338 aaPredicted RBP17.94■□□□□ 0.46
SYMPK-210ENST00000598329 RALGAPBQ86X10 1494 aa17.94■□□□□ 0.46
SYMPK-210ENST00000598329 PXDNQ92626 1479 aa17.94■□□□□ 0.46
SYMPK-210ENST00000598329 HIRIP3Q9BW71 556 aaPredicted RBP17.93■□□□□ 0.46
SYMPK-210ENST00000598329 PRR36Q9H6K5 1346 aa17.93■□□□□ 0.46
SYMPK-210ENST00000598329 TULP4Q9NRJ4 1543 aa17.93■□□□□ 0.46
SYMPK-210ENST00000598329 NUTM2FA1L443 756 aa17.92■□□□□ 0.46
SYMPK-210ENST00000598329 FOXO3O43524 673 aa17.92■□□□□ 0.46
SYMPK-210ENST00000598329 PHF8Q9UPP1 1060 aa17.92■□□□□ 0.46
SYMPK-210ENST00000598329 SHPRHQ149N8 1683 aa17.92■□□□□ 0.46
SYMPK-210ENST00000598329 PNPLA6Q8IY17 1366 aa17.91■□□□□ 0.46
SYMPK-210ENST00000598329 DISP3Q9P2K9 1392 aa17.91■□□□□ 0.46
SYMPK-210ENST00000598329 USP32Q8NFA0 1604 aa17.91■□□□□ 0.46
SYMPK-210ENST00000598329 KIF1AQ12756 1690 aa17.9■□□□□ 0.46
SYMPK-210ENST00000598329 CDK19Q9BWU1 502 aa17.9■□□□□ 0.46
SYMPK-210ENST00000598329 SBNO2Q9Y2G9 1366 aa17.9■□□□□ 0.46
SYMPK-210ENST00000598329 ATP7BP35670 1465 aa17.88■□□□□ 0.45
SYMPK-210ENST00000598329 NUDT16Q96DE0 195 aaKnown RBP17.87■□□□□ 0.45
SYMPK-210ENST00000598329 CARD11Q9BXL7 1154 aa17.87■□□□□ 0.45
SYMPK-210ENST00000598329 PLEKHG3A1L390 1219 aa17.86■□□□□ 0.45
SYMPK-210ENST00000598329 KRT28Q7Z3Y7 464 aa17.86■□□□□ 0.45
SYMPK-210ENST00000598329 RGS17Q9UGC6 210 aaPredicted RBP17.86■□□□□ 0.45
SYMPK-210ENST00000598329 CCDC61Q9Y6R9 512 aa17.86■□□□□ 0.45
SYMPK-210ENST00000598329 SPATA31A3Q5VYP0 1347 aa17.86■□□□□ 0.45
SYMPK-210ENST00000598329 SBNO1A3KN83 1393 aa17.86■□□□□ 0.45
SYMPK-210ENST00000598329 LRP6O75581 1613 aa17.86■□□□□ 0.45
SYMPK-210ENST00000598329 RGPD8O14715 1765 aaPredicted RBP17.85■□□□□ 0.45
SYMPK-210ENST00000598329 POLR3AO14802 1390 aaPredicted RBP17.84■□□□□ 0.45
SYMPK-210ENST00000598329 PSME1Q06323 249 aa17.84■□□□□ 0.45
SYMPK-210ENST00000598329 COL22A1Q8NFW1 1626 aaPredicted RBP17.83■□□□□ 0.45
SYMPK-210ENST00000598329 PMFBP1Q8TBY8 1022 aa17.83■□□□□ 0.44
SYMPK-210ENST00000598329 CCER1Q8TC90 406 aaPredicted RBP17.83■□□□□ 0.44
SYMPK-210ENST00000598329 EVC2Q86UK5 1308 aa17.82■□□□□ 0.44
SYMPK-210ENST00000598329 QRICH2Q9H0J4 1663 aa17.81■□□□□ 0.44
SYMPK-210ENST00000598329 XPCQ01831 940 aaPredicted RBP17.81■□□□□ 0.44
SYMPK-210ENST00000598329 ILDR2Q71H61 639 aa17.81■□□□□ 0.44
SYMPK-210ENST00000598329 PUS7Q96PZ0 661 aaKnown RBP17.81■□□□□ 0.44
SYMPK-210ENST00000598329 TNS3Q68CZ2 1445 aa17.8■□□□□ 0.44
SYMPK-210ENST00000598329 SLC24A1O60721 1099 aa17.79■□□□□ 0.44
SYMPK-210ENST00000598329 TESK2Q96S53 571 aa17.79■□□□□ 0.44
SYMPK-210ENST00000598329 TOPAZ1Q8N9V7 1692 aa17.79■□□□□ 0.44
SYMPK-210ENST00000598329 SRPK2P78362 688 aaKnown RBP17.78■□□□□ 0.44
SYMPK-210ENST00000598329 PHF23Q9BUL5 403 aaPredicted RBP17.78■□□□□ 0.44
SYMPK-210ENST00000598329 CABP2Q9NPB3 220 aa17.78■□□□□ 0.44
SYMPK-210ENST00000598329 ARHGEF10O15013 1369 aa17.78■□□□□ 0.44
SYMPK-210ENST00000598329 NGDNQ8NEJ9 315 aaKnown RBP17.77■□□□□ 0.44
SYMPK-210ENST00000598329 ITSN1Q15811 1721 aa17.77■□□□□ 0.44
SYMPK-210ENST00000598329 BRD4O60885 1362 aaPredicted RBP17.77■□□□□ 0.43
SYMPK-210ENST00000598329 ACEP12821 1306 aa17.76■□□□□ 0.43
SYMPK-210ENST00000598329 TRPM3Q9HCF6 1732 aaPredicted RBP17.76■□□□□ 0.43
SYMPK-210ENST00000598329 PPIP5K1Q6PFW1 1433 aa17.74■□□□□ 0.43
SYMPK-210ENST00000598329 ST20-MTHFSA0A0A6YYL1 179 aa17.74■□□□□ 0.43
SYMPK-210ENST00000598329 NUTM2BA6NNL0 878 aaPredicted RBP17.74■□□□□ 0.43
SYMPK-210ENST00000598329 NUTM2EB1AL46 878 aaPredicted RBP17.74■□□□□ 0.43
SYMPK-210ENST00000598329 NUTM2AQ8IVF1 878 aaPredicted RBP17.74■□□□□ 0.43
SYMPK-210ENST00000598329 FNBP4Q8N3X1 1017 aaPredicted RBP17.74■□□□□ 0.43
SYMPK-210ENST00000598329 CABP1Q9NZU7 370 aa17.74■□□□□ 0.43
SYMPK-210ENST00000598329 ATAD2Q6PL18 1390 aa17.74■□□□□ 0.43
SYMPK-210ENST00000598329 ZNF772Q68DY9 489 aaPredicted RBP17.73■□□□□ 0.43
SYMPK-210ENST00000598329 POTEAQ6S8J7 498 aa17.73■□□□□ 0.43
SYMPK-210ENST00000598329 ALS2Q96Q42 1657 aa17.72■□□□□ 0.43
SYMPK-210ENST00000598329 MEX3CQ5U5Q3 659 aaKnown RBP17.72■□□□□ 0.43
SYMPK-210ENST00000598329 SSH2Q76I76 1423 aa17.72■□□□□ 0.43
SYMPK-210ENST00000598329 USP47Q96K76 1375 aa17.71■□□□□ 0.43
SYMPK-210ENST00000598329 CPSF1Q10570 1443 aaKnown RBP17.71■□□□□ 0.43
SYMPK-210ENST00000598329 ZNF692Q9BU19 519 aaPredicted RBP17.7■□□□□ 0.42
SYMPK-210ENST00000598329 AFF2P51816 1311 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms